RNA–Protein interactions for RNA: ENST00000641074.1

PHGDH-209, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,780 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-209ENST00000641074 DHX57Q6P158 1386 aaKnown RBP27.1■■□□□ 1.93
PHGDH-209ENST00000641074 ABCC5O15440 1437 aa27.09■■□□□ 1.93
PHGDH-209ENST00000641074 CHIC2Q9UKJ5 165 aa27.08■■□□□ 1.93
PHGDH-209ENST00000641074 PREX2Q70Z35 1606 aa27.08■■□□□ 1.92
PHGDH-209ENST00000641074 CDC42BPBQ9Y5S2 1711 aa27.06■■□□□ 1.92
PHGDH-209ENST00000641074 NAIPQ13075 1403 aa27.06■■□□□ 1.92
PHGDH-209ENST00000641074 WDR7Q9Y4E6 1490 aa27.05■■□□□ 1.92
PHGDH-209ENST00000641074 AKNAQ7Z591 1439 aa27.02■■□□□ 1.92
PHGDH-209ENST00000641074 RRP7BPQ9NSQ0 103 aa27.02■■□□□ 1.92
PHGDH-209ENST00000641074 NPM1P06748 294 aaKnown RBP eCLIP27.01■■□□□ 1.91
PHGDH-209ENST00000641074 MYO5CQ9NQX4 1742 aa27.01■■□□□ 1.91
PHGDH-209ENST00000641074 ASXL2Q76L83 1435 aa27■■□□□ 1.91
PHGDH-209ENST00000641074 RIMBP3CA6NJZ7 1639 aa27■■□□□ 1.91
PHGDH-209ENST00000641074 RIMBP3BA6NNM3 1639 aa27■■□□□ 1.91
PHGDH-209ENST00000641074 RIMBP3Q9UFD9 1639 aa27■■□□□ 1.91
PHGDH-209ENST00000641074 ARHGAP5Q13017 1502 aa26.98■■□□□ 1.91
PHGDH-209ENST00000641074 ROCK1Q13464 1354 aa26.98■■□□□ 1.91
PHGDH-209ENST00000641074 SAMD9LQ8IVG5 1584 aa26.98■■□□□ 1.91
PHGDH-209ENST00000641074 GCC2Q8IWJ2 1684 aa26.97■■□□□ 1.91
PHGDH-209ENST00000641074 CLSPNQ9HAW4 1339 aa26.96■■□□□ 1.91
PHGDH-209ENST00000641074 PLCH2O75038 1416 aa26.96■■□□□ 1.91
PHGDH-209ENST00000641074 CROCC2H7BZ55 1655 aa26.95■■□□□ 1.9
PHGDH-209ENST00000641074 CYB5RLQ6IPT4 315 aa26.93■■□□□ 1.9
PHGDH-209ENST00000641074 MBD5Q9P267 1494 aa26.92■■□□□ 1.9
PHGDH-209ENST00000641074 HNRNPMP52272 730 aaKnown RBP eCLIP26.92■■□□□ 1.91e-6■■■■□ 22.8
PHGDH-209ENST00000641074 ARHGEF5Q12774 1597 aa26.91■■□□□ 1.9
PHGDH-209ENST00000641074 ABCA9Q8IUA7 1624 aa26.88■■□□□ 1.89
PHGDH-209ENST00000641074 ADGBQ8N7X0 1667 aa26.88■■□□□ 1.89
PHGDH-209ENST00000641074 ADGRL2O95490 1459 aa26.88■■□□□ 1.89
PHGDH-209ENST00000641074 SHANK2Q9UPX8 1470 aa26.87■■□□□ 1.89
PHGDH-209ENST00000641074 KDM6BO15054 1643 aa26.87■■□□□ 1.89
PHGDH-209ENST00000641074 NCOA1Q15788 1441 aa26.87■■□□□ 1.89
PHGDH-209ENST00000641074 EFCAB2Q5VUJ9 269 aa26.86■■□□□ 1.89
PHGDH-209ENST00000641074 MAPKBP1O60336 1514 aa26.86■■□□□ 1.89
PHGDH-209ENST00000641074 SYCP2Q9BX26 1530 aa26.86■■□□□ 1.89
PHGDH-209ENST00000641074 ARAP3Q8WWN8 1544 aa26.85■■□□□ 1.89
PHGDH-209ENST00000641074 PLEKHH2Q8IVE3 1493 aa26.85■■□□□ 1.89
PHGDH-209ENST00000641074 C9orf84Q5VXU9 1444 aa26.85■■□□□ 1.89
PHGDH-209ENST00000641074 KIAA1107Q9UPP5 1409 aa26.85■■□□□ 1.89
PHGDH-209ENST00000641074 RSPH4AQ5TD94 716 aa26.84■■□□□ 1.89
PHGDH-209ENST00000641074 CCDC141Q6ZP82 1450 aa26.84■■□□□ 1.89
PHGDH-209ENST00000641074 TSPY4P0CV99 314 aa26.84■■□□□ 1.89
PHGDH-209ENST00000641074 TSPY10P0CW01 314 aa26.84■■□□□ 1.89
PHGDH-209ENST00000641074 ANKRD30AQ9BXX3 1397 aa26.83■■□□□ 1.89
PHGDH-209ENST00000641074 ARHGEF12Q9NZN5 1544 aa26.8■■□□□ 1.88
PHGDH-209ENST00000641074 ABCC1P33527 1531 aa26.77■■□□□ 1.88
PHGDH-209ENST00000641074 FANCAO15360 1455 aa26.74■■□□□ 1.87
PHGDH-209ENST00000641074 TRIM52Q96A61 297 aa26.74■■□□□ 1.87
PHGDH-209ENST00000641074 MAST1Q9Y2H9 1570 aa26.72■■□□□ 1.87
PHGDH-209ENST00000641074 ACIN1Q9UKV3 1341 aaKnown RBP26.72■■□□□ 1.87
PHGDH-209ENST00000641074 ANKRD50Q9ULJ7 1429 aa26.69■■□□□ 1.86
PHGDH-209ENST00000641074 TRAPPC8Q9Y2L5 1435 aa26.69■■□□□ 1.86
PHGDH-209ENST00000641074 KIF15Q9NS87 1388 aa26.69■■□□□ 1.86
PHGDH-209ENST00000641074 CD109Q6YHK3 1445 aa26.68■■□□□ 1.86
PHGDH-209ENST00000641074 DENND4BO75064 1496 aaPredicted RBP26.64■■□□□ 1.86
PHGDH-209ENST00000641074 SIN3AQ96ST3 1273 aa26.63■■□□□ 1.85
PHGDH-209ENST00000641074 MPHOSPH9Q99550 1183 aa26.63■■□□□ 1.85
PHGDH-209ENST00000641074 ADGRL1O94910 1474 aa26.62■■□□□ 1.85
PHGDH-209ENST00000641074 PLXNC1O60486 1568 aa26.61■■□□□ 1.85
PHGDH-209ENST00000641074 AFAP1Q8N556 730 aa26.61■■□□□ 1.85
PHGDH-209ENST00000641074 SCAPERQ9BY12 1400 aa26.6■■□□□ 1.85
PHGDH-209ENST00000641074 NEUROD1Q13562 356 aa26.58■■□□□ 1.85
PHGDH-209ENST00000641074 CFAP74Q9C0B2 1584 aa26.57■■□□□ 1.84
PHGDH-209ENST00000641074 SPAG9O60271 1321 aaKnown RBP26.56■■□□□ 1.84
PHGDH-209ENST00000641074 GLI2P10070 1586 aa26.56■■□□□ 1.84
PHGDH-209ENST00000641074 PZPP20742 1482 aa26.56■■□□□ 1.84
PHGDH-209ENST00000641074 RTEL1-TNFRSF6BF6WH68 1400 aa26.55■■□□□ 1.84
PHGDH-209ENST00000641074 SLC4A1APQ9BWU0 796 aaKnown RBP26.54■■□□□ 1.84
PHGDH-209ENST00000641074 MAP3K4Q9Y6R4 1608 aa26.54■■□□□ 1.84
PHGDH-209ENST00000641074 ZFYVE16Q7Z3T8 1539 aa26.53■■□□□ 1.84
PHGDH-209ENST00000641074 DUOX2Q9NRD8 1548 aa26.52■■□□□ 1.84
PHGDH-209ENST00000641074 DIP2BQ9P265 1576 aa26.5■■□□□ 1.83
PHGDH-209ENST00000641074 FOXD1Q16676 465 aa26.5■■□□□ 1.83
PHGDH-209ENST00000641074 NUP155O75694 1391 aa26.49■■□□□ 1.83
PHGDH-209ENST00000641074 NEO1Q92859 1461 aa26.49■■□□□ 1.83
PHGDH-209ENST00000641074 INO80Q9ULG1 1556 aaPredicted RBP26.49■■□□□ 1.83
PHGDH-209ENST00000641074 FAM69CQ0P6D2 419 aa26.48■■□□□ 1.83
PHGDH-209ENST00000641074 TIMELESSQ9UNS1 1208 aa26.48■■□□□ 1.83
PHGDH-209ENST00000641074 ATP7AQ04656 1500 aa26.47■■□□□ 1.83
PHGDH-209ENST00000641074 KDM5DQ9BY66 1539 aa26.47■■□□□ 1.83
PHGDH-209ENST00000641074 ZNF518AQ6AHZ1 1483 aa26.46■■□□□ 1.83
PHGDH-209ENST00000641074 ERBINQ96RT1 1412 aa26.46■■□□□ 1.83
PHGDH-209ENST00000641074 POGZQ7Z3K3 1410 aa26.44■■□□□ 1.82
PHGDH-209ENST00000641074 ANKRD30BQ9BXX2 1392 aa26.43■■□□□ 1.82
PHGDH-209ENST00000641074 UNC13BO14795 1591 aa26.42■■□□□ 1.82
PHGDH-209ENST00000641074 PKD2Q13563 968 aa26.41■■□□□ 1.82
PHGDH-209ENST00000641074 MYT1LQ9UL68 1186 aa26.41■■□□□ 1.82
PHGDH-209ENST00000641074 KDM5CP41229 1560 aa26.39■■□□□ 1.82
PHGDH-209ENST00000641074 TONSLQ96HA7 1378 aa26.38■■□□□ 1.81
PHGDH-209ENST00000641074 KIDINS220Q9ULH0 1771 aa26.38■■□□□ 1.81
PHGDH-209ENST00000641074 FAM135AQ9P2D6 1515 aa26.36■■□□□ 1.81
PHGDH-209ENST00000641074 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.35■■□□□ 1.815e-16■■□□□ 13.6
PHGDH-209ENST00000641074 MAGI2Q86UL8 1455 aa26.34■■□□□ 1.81
PHGDH-209ENST00000641074 MLH3Q9UHC1 1453 aa26.34■■□□□ 1.81
PHGDH-209ENST00000641074 RAPGEF3O95398 923 aa26.33■■□□□ 1.81
PHGDH-209ENST00000641074 PPP1R15AO75807 674 aaPredicted RBP26.33■■□□□ 1.8
PHGDH-209ENST00000641074 PPRC1Q5VV67 1664 aaKnown RBP26.32■■□□□ 1.8
PHGDH-209ENST00000641074 TSPOAP1O95153 1857 aa26.32■■□□□ 1.8
PHGDH-209ENST00000641074 DHX29Q7Z478 1369 aaKnown RBP26.32■■□□□ 1.8
PHGDH-209ENST00000641074 HECW2Q9P2P5 1572 aa26.31■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms