RNA–Protein interactions for RNA: ENST00000640440.1

HNRNPU-229, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 3

Gene HNRNPU, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-229ENST00000640440 ADAMTSL3P82987 1691 aa23.28■■□□□ 1.32
HNRNPU-229ENST00000640440 BCORL1Q5H9F3 1711 aa23.28■■□□□ 1.32
HNRNPU-229ENST00000640440 POGZQ7Z3K3 1410 aa23.28■■□□□ 1.32
HNRNPU-229ENST00000640440 EFCAB2Q5VUJ9 269 aa23.28■■□□□ 1.32
HNRNPU-229ENST00000640440 ZFYVE16Q7Z3T8 1539 aa23.28■■□□□ 1.32
HNRNPU-229ENST00000640440 PREX2Q70Z35 1606 aa23.27■■□□□ 1.32
HNRNPU-229ENST00000640440 CDC42BPAQ5VT25 1732 aa23.25■■□□□ 1.31
HNRNPU-229ENST00000640440 ARID4BQ4LE39 1312 aaPredicted RBP23.25■■□□□ 1.31
HNRNPU-229ENST00000640440 CEP162Q5TB80 1403 aa23.24■■□□□ 1.31
HNRNPU-229ENST00000640440 YEATS2Q9ULM3 1422 aa23.24■■□□□ 1.31
HNRNPU-229ENST00000640440 MAGI2Q86UL8 1455 aa23.23■■□□□ 1.31
HNRNPU-229ENST00000640440 MADDQ8WXG6 1647 aa23.22■■□□□ 1.31
HNRNPU-229ENST00000640440 SIGLEC1Q9BZZ2 1709 aa23.22■■□□□ 1.31
HNRNPU-229ENST00000640440 HECW2Q9P2P5 1572 aa23.19■■□□□ 1.3
HNRNPU-229ENST00000640440 ZNF518AQ6AHZ1 1483 aa23.17■■□□□ 1.3
HNRNPU-229ENST00000640440 ITSN2Q9NZM3 1697 aa23.17■■□□□ 1.3
HNRNPU-229ENST00000640440 KDM5CP41229 1560 aa23.17■■□□□ 1.3
HNRNPU-229ENST00000640440 PTPRMP28827 1452 aa23.17■■□□□ 1.3
HNRNPU-229ENST00000640440 RIMS1Q86UR5 1692 aaKnown RBP23.16■■□□□ 1.3
HNRNPU-229ENST00000640440 ABCC1P33527 1531 aa23.16■■□□□ 1.3
HNRNPU-229ENST00000640440 ATP10AO60312 1499 aa23.11■■□□□ 1.29
HNRNPU-229ENST00000640440 AFAP1Q8N556 730 aa23.11■■□□□ 1.29
HNRNPU-229ENST00000640440 FER1L4A9Z1Z3 1794 aa23.11■■□□□ 1.29
HNRNPU-229ENST00000640440 C9orf84Q5VXU9 1444 aa23.1■■□□□ 1.29
HNRNPU-229ENST00000640440 ARHGEF12Q9NZN5 1544 aa23.1■■□□□ 1.29
HNRNPU-229ENST00000640440 LOC105371045A0A1W2PR82 267 aa23.1■■□□□ 1.29
HNRNPU-229ENST00000640440 MTUS2Q5JR59 1369 aa23.1■■□□□ 1.29
HNRNPU-229ENST00000640440 GPATCH8Q9UKJ3 1502 aaKnown RBP23.09■■□□□ 1.29
HNRNPU-229ENST00000640440 SAMD9LQ8IVG5 1584 aa23.09■■□□□ 1.29
HNRNPU-229ENST00000640440 TRAPPC8Q9Y2L5 1435 aa23.08■■□□□ 1.29
HNRNPU-229ENST00000640440 EHBP1L1Q8N3D4 1523 aa23.08■■□□□ 1.28
HNRNPU-229ENST00000640440 DIP2CQ9Y2E4 1556 aa23.07■■□□□ 1.28
HNRNPU-229ENST00000640440 MYT1LQ9UL68 1186 aa23.07■■□□□ 1.28
HNRNPU-229ENST00000640440 ABCA6Q8N139 1617 aa23.07■■□□□ 1.28
HNRNPU-229ENST00000640440 MLECQ14165 292 aa23.06■■□□□ 1.28
HNRNPU-229ENST00000640440 ZNF777Q9ULD5 760 aaPredicted RBP23.05■■□□□ 1.28
HNRNPU-229ENST00000640440 CCNB3Q8WWL7 1395 aa23.04■■□□□ 1.28
HNRNPU-229ENST00000640440 SYCP2Q9BX26 1530 aa23.04■■□□□ 1.28
HNRNPU-229ENST00000640440 MLH3Q9UHC1 1453 aa23.04■■□□□ 1.28
HNRNPU-229ENST00000640440 KIDINS220Q9ULH0 1771 aa23.03■■□□□ 1.28
HNRNPU-229ENST00000640440 TIAM1Q13009 1591 aa23.02■■□□□ 1.28
HNRNPU-229ENST00000640440 REREQ9P2R6 1566 aa23■■□□□ 1.27
HNRNPU-229ENST00000640440 CFDP1Q9UEE9 299 aaPredicted RBP22.99■■□□□ 1.27
HNRNPU-229ENST00000640440 PLPPR3Q6T4P5 718 aa22.98■■□□□ 1.27
HNRNPU-229ENST00000640440 VPS8Q8N3P4 1428 aa22.98■■□□□ 1.27
HNRNPU-229ENST00000640440 SUPT6HQ7KZ85 1726 aaKnown RBP22.97■■□□□ 1.27
HNRNPU-229ENST00000640440 PLEKHH2Q8IVE3 1493 aa22.97■■□□□ 1.27
HNRNPU-229ENST00000640440 KIAA1107Q9UPP5 1409 aa22.94■■□□□ 1.26
HNRNPU-229ENST00000640440 HNRNPMP52272 730 aaKnown RBP eCLIP22.94■■□□□ 1.262e-10■■□□□ 11.9
HNRNPU-229ENST00000640440 INO80Q9ULG1 1556 aaPredicted RBP22.92■■□□□ 1.26
HNRNPU-229ENST00000640440 AGLP35573 1532 aa22.92■■□□□ 1.26
HNRNPU-229ENST00000640440 LMTK3Q96Q04 1460 aa22.92■■□□□ 1.26
HNRNPU-229ENST00000640440 ATP7AQ04656 1500 aa22.91■■□□□ 1.26
HNRNPU-229ENST00000640440 NCOA2Q15596 1464 aa22.91■■□□□ 1.26
HNRNPU-229ENST00000640440 SPAG9O60271 1321 aaKnown RBP22.9■■□□□ 1.26
HNRNPU-229ENST00000640440 ZNF644Q9H582 1327 aaPredicted RBP22.88■■□□□ 1.25
HNRNPU-229ENST00000640440 LRRC9Q6ZRR7 1453 aa22.85■■□□□ 1.25
HNRNPU-229ENST00000640440 SETD1BQ9UPS6 1966 aaKnown RBP22.85■■□□□ 1.25
HNRNPU-229ENST00000640440 MBD5Q9P267 1494 aa22.83■■□□□ 1.25
HNRNPU-229ENST00000640440 C3P01024 1663 aa22.83■■□□□ 1.24
HNRNPU-229ENST00000640440 ADGBQ8N7X0 1667 aa22.83■■□□□ 1.24
HNRNPU-229ENST00000640440 PREX1Q8TCU6 1659 aa22.83■■□□□ 1.24
HNRNPU-229ENST00000640440 PLXNC1O60486 1568 aa22.82■■□□□ 1.24
HNRNPU-229ENST00000640440 CAMSAP2Q08AD1 1489 aa22.82■■□□□ 1.24
HNRNPU-229ENST00000640440 CEBPAP49715 358 aaPredicted RBP22.82■■□□□ 1.24
HNRNPU-229ENST00000640440 MAP3K1Q13233 1512 aa22.81■■□□□ 1.24
HNRNPU-229ENST00000640440 A2MP01023 1474 aa22.79■■□□□ 1.24
HNRNPU-229ENST00000640440 HSPA2P54652 639 aa22.78■■□□□ 1.24
HNRNPU-229ENST00000640440 ESF1Q9H501 851 aaKnown RBP22.78■■□□□ 1.24
HNRNPU-229ENST00000640440 CCDC141Q6ZP82 1450 aa22.77■■□□□ 1.24
HNRNPU-229ENST00000640440 KANK4Q5T7N3 995 aaPredicted RBP22.76■■□□□ 1.23
HNRNPU-229ENST00000640440 MROH2AA6NES4 1674 aa22.74■■□□□ 1.23
HNRNPU-229ENST00000640440 CNTLNQ9NXG0 1405 aa22.74■■□□□ 1.23
HNRNPU-229ENST00000640440 ARHGEF5Q12774 1597 aa22.73■■□□□ 1.23
HNRNPU-229ENST00000640440 CLTCQ00610 1675 aaKnown RBP22.73■■□□□ 1.23
HNRNPU-229ENST00000640440 RTEL1-TNFRSF6BF6WH68 1400 aa22.73■■□□□ 1.23
HNRNPU-229ENST00000640440 UHRF1BP1Q6BDS2 1440 aa22.69■■□□□ 1.22
HNRNPU-229ENST00000640440 MYOM3Q5VTT5 1437 aa22.68■■□□□ 1.22
HNRNPU-229ENST00000640440 APLP2Q06481 763 aa22.67■■□□□ 1.22
HNRNPU-229ENST00000640440 RSPH4AQ5TD94 716 aa22.67■■□□□ 1.22
HNRNPU-229ENST00000640440 ILDR1Q86SU0 546 aaPredicted RBP22.66■■□□□ 1.22
HNRNPU-229ENST00000640440 GGT6Q6P531 493 aa22.65■■□□□ 1.22
HNRNPU-229ENST00000640440 DHX29Q7Z478 1369 aaKnown RBP22.64■■□□□ 1.22
HNRNPU-229ENST00000640440 MIA2Q96PC5 1412 aa22.64■■□□□ 1.21
HNRNPU-229ENST00000640440 STRCQ7RTU9 1775 aa22.63■■□□□ 1.21
HNRNPU-229ENST00000640440 ZMYM3Q14202 1370 aa22.63■■□□□ 1.21
HNRNPU-229ENST00000640440 TSPY4P0CV99 314 aa22.61■■□□□ 1.21
HNRNPU-229ENST00000640440 TSPY10P0CW01 314 aa22.61■■□□□ 1.21
HNRNPU-229ENST00000640440 MAST1Q9Y2H9 1570 aa22.61■■□□□ 1.21
HNRNPU-229ENST00000640440 NPATQ14207 1427 aa22.6■■□□□ 1.21
HNRNPU-229ENST00000640440 PTPN23Q9H3S7 1636 aa22.58■■□□□ 1.21
HNRNPU-229ENST00000640440 KIF3BO15066 747 aa22.57■■□□□ 1.2
HNRNPU-229ENST00000640440 CROCC2H7BZ55 1655 aa22.57■■□□□ 1.2
HNRNPU-229ENST00000640440 PPP6R1Q9UPN7 881 aa22.56■■□□□ 1.2
HNRNPU-229ENST00000640440 MYO3AQ8NEV4 1616 aa22.56■■□□□ 1.2
HNRNPU-229ENST00000640440 PTPRKQ15262 1439 aa22.55■■□□□ 1.2
HNRNPU-229ENST00000640440 ZNF142P52746 1687 aaPredicted RBP22.54■■□□□ 1.2
HNRNPU-229ENST00000640440 KDM5DQ9BY66 1539 aa22.53■■□□□ 1.2
HNRNPU-229ENST00000640440 RNF17Q9BXT8 1623 aaKnown RBP22.52■■□□□ 1.2
HNRNPU-229ENST00000640440 FAM135AQ9P2D6 1515 aa22.52■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms