RNA–Protein interactions for RNA: ENST00000639848.1

HLA-B-256, Transcript of major histocompatibility complex, class I, B, humanhuman

BASIC

Gene HLA-B, Length 1,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-256ENST00000639848 SCAPERQ9BY12 1400 aa32.17■■■□□ 2.74
HLA-B-256ENST00000639848 RICTORQ6R327 1708 aa32.14■■■□□ 2.74
HLA-B-256ENST00000639848 PREX2Q70Z35 1606 aa32.12■■■□□ 2.73
HLA-B-256ENST00000639848 POGZQ7Z3K3 1410 aa32.12■■■□□ 2.73
HLA-B-256ENST00000639848 ZMYM4Q5VZL5 1548 aa32.11■■■□□ 2.73
HLA-B-256ENST00000639848 EHBP1L1Q8N3D4 1523 aa32.1■■■□□ 2.73
HLA-B-256ENST00000639848 CDC42BPBQ9Y5S2 1711 aa32.08■■■□□ 2.73
HLA-B-256ENST00000639848 MAGI2Q86UL8 1455 aa32.08■■■□□ 2.73
HLA-B-256ENST00000639848 ARHGEF40Q8TER5 1519 aa32.05■■■□□ 2.72
HLA-B-256ENST00000639848 GPATCH8Q9UKJ3 1502 aaKnown RBP32.05■■■□□ 2.72
HLA-B-256ENST00000639848 ZNF518AQ6AHZ1 1483 aa32.03■■■□□ 2.72
HLA-B-256ENST00000639848 CDC42BPAQ5VT25 1732 aa32.03■■■□□ 2.72
HLA-B-256ENST00000639848 CCNB3Q8WWL7 1395 aa32.02■■■□□ 2.72
HLA-B-256ENST00000639848 TIAM1Q13009 1591 aa32.02■■■□□ 2.72
HLA-B-256ENST00000639848 ABCC1P33527 1531 aa31.99■■■□□ 2.71
HLA-B-256ENST00000639848 MAP3K1Q13233 1512 aa31.99■■■□□ 2.71
HLA-B-256ENST00000639848 ZFYVE16Q7Z3T8 1539 aa31.99■■■□□ 2.71
HLA-B-256ENST00000639848 KDM5CP41229 1560 aa31.96■■■□□ 2.71
HLA-B-256ENST00000639848 YEATS2Q9ULM3 1422 aa31.95■■■□□ 2.71
HLA-B-256ENST00000639848 CFDP1Q9UEE9 299 aaPredicted RBP31.94■■■□□ 2.7
HLA-B-256ENST00000639848 AFAP1Q8N556 730 aa31.93■■■□□ 2.7
HLA-B-256ENST00000639848 ARHGEF12Q9NZN5 1544 aa31.92■■■□□ 2.7
HLA-B-256ENST00000639848 LRRC9Q6ZRR7 1453 aa31.91■■■□□ 2.7
HLA-B-256ENST00000639848 PLEKHH2Q8IVE3 1493 aa31.9■■■□□ 2.7
HLA-B-256ENST00000639848 SAMD9LQ8IVG5 1584 aa31.9■■■□□ 2.7
HLA-B-256ENST00000639848 ZNF777Q9ULD5 760 aaPredicted RBP31.89■■■□□ 2.7
HLA-B-256ENST00000639848 KIAA1107Q9UPP5 1409 aa31.89■■■□□ 2.7
HLA-B-256ENST00000639848 TRAPPC8Q9Y2L5 1435 aa31.89■■■□□ 2.7
HLA-B-256ENST00000639848 NCOA2Q15596 1464 aa31.89■■■□□ 2.7
HLA-B-256ENST00000639848 SUPT6HQ7KZ85 1726 aaKnown RBP31.88■■■□□ 2.69
HLA-B-256ENST00000639848 ITSN2Q9NZM3 1697 aa31.87■■■□□ 2.69
HLA-B-256ENST00000639848 MLH3Q9UHC1 1453 aa31.87■■■□□ 2.69
HLA-B-256ENST00000639848 ARID4BQ4LE39 1312 aaPredicted RBP31.86■■■□□ 2.69
HLA-B-256ENST00000639848 ATP10AO60312 1499 aa31.85■■■□□ 2.69
HLA-B-256ENST00000639848 HECW2Q9P2P5 1572 aa31.85■■■□□ 2.69
HLA-B-256ENST00000639848 SYCP2Q9BX26 1530 aa31.83■■■□□ 2.69
HLA-B-256ENST00000639848 C9orf84Q5VXU9 1444 aa31.82■■■□□ 2.68
HLA-B-256ENST00000639848 APLP2Q06481 763 aa31.79■■■□□ 2.68
HLA-B-256ENST00000639848 BCORL1Q5H9F3 1711 aa31.79■■■□□ 2.68
HLA-B-256ENST00000639848 ADAMTSL3P82987 1691 aa31.79■■■□□ 2.68
HLA-B-256ENST00000639848 HNRNPMP52272 730 aaKnown RBP eCLIP31.78■■■□□ 2.68
HLA-B-256ENST00000639848 KANK4Q5T7N3 995 aaPredicted RBP31.78■■■□□ 2.68
HLA-B-256ENST00000639848 MYT1LQ9UL68 1186 aa31.77■■■□□ 2.68
HLA-B-256ENST00000639848 DIP2CQ9Y2E4 1556 aa31.75■■■□□ 2.67
HLA-B-256ENST00000639848 REREQ9P2R6 1566 aa31.73■■■□□ 2.67
HLA-B-256ENST00000639848 ZNF644Q9H582 1327 aaPredicted RBP31.73■■■□□ 2.67
HLA-B-256ENST00000639848 SPAG9O60271 1321 aaKnown RBP31.72■■■□□ 2.67
HLA-B-256ENST00000639848 MBD5Q9P267 1494 aa31.71■■■□□ 2.67
HLA-B-256ENST00000639848 SIGLEC1Q9BZZ2 1709 aa31.7■■■□□ 2.67
HLA-B-256ENST00000639848 ABCA6Q8N139 1617 aa31.7■■■□□ 2.66
HLA-B-256ENST00000639848 KIDINS220Q9ULH0 1771 aa31.68■■■□□ 2.66
HLA-B-256ENST00000639848 PTPRMP28827 1452 aa31.66■■■□□ 2.66
HLA-B-256ENST00000639848 CAMSAP2Q08AD1 1489 aa31.66■■■□□ 2.66
HLA-B-256ENST00000639848 MADDQ8WXG6 1647 aa31.66■■■□□ 2.66
HLA-B-256ENST00000639848 RSPH4AQ5TD94 716 aa31.64■■■□□ 2.66
HLA-B-256ENST00000639848 MYOM3Q5VTT5 1437 aa31.64■■■□□ 2.66
HLA-B-256ENST00000639848 AGLP35573 1532 aa31.64■■■□□ 2.66
HLA-B-256ENST00000639848 ATP7AQ04656 1500 aa31.64■■■□□ 2.66
HLA-B-256ENST00000639848 MIA2Q96PC5 1412 aa31.63■■■□□ 2.65
HLA-B-256ENST00000639848 INO80Q9ULG1 1556 aaPredicted RBP31.63■■■□□ 2.65
HLA-B-256ENST00000639848 CCDC141Q6ZP82 1450 aa31.59■■■□□ 2.65
HLA-B-256ENST00000639848 RTEL1-TNFRSF6BF6WH68 1400 aa31.59■■■□□ 2.65
HLA-B-256ENST00000639848 MLECQ14165 292 aa31.59■■■□□ 2.65
HLA-B-256ENST00000639848 ARHGEF5Q12774 1597 aa31.56■■■□□ 2.64
HLA-B-256ENST00000639848 RIMS1Q86UR5 1692 aaKnown RBP31.53■■■□□ 2.64
HLA-B-256ENST00000639848 A2MP01023 1474 aa31.51■■■□□ 2.63
HLA-B-256ENST00000639848 PLXNC1O60486 1568 aa31.49■■■□□ 2.63
HLA-B-256ENST00000639848 FER1L4A9Z1Z3 1794 aa31.48■■■□□ 2.63
HLA-B-256ENST00000639848 TSPY4P0CV99 314 aa31.46■■■□□ 2.63
HLA-B-256ENST00000639848 TSPY10P0CW01 314 aa31.46■■■□□ 2.63
HLA-B-256ENST00000639848 ADGBQ8N7X0 1667 aa31.44■■■□□ 2.62
HLA-B-256ENST00000639848 FGD6Q6ZV73 1430 aa31.42■■■□□ 2.62
HLA-B-256ENST00000639848 DHX29Q7Z478 1369 aaKnown RBP31.41■■■□□ 2.62
HLA-B-256ENST00000639848 CNTLNQ9NXG0 1405 aa31.39■■■□□ 2.62
HLA-B-256ENST00000639848 MAST1Q9Y2H9 1570 aa31.39■■■□□ 2.61
HLA-B-256ENST00000639848 ESF1Q9H501 851 aaKnown RBP31.38■■■□□ 2.61
HLA-B-256ENST00000639848 TCOF1Q13428 1488 aaKnown RBP31.38■■■□□ 2.61
HLA-B-256ENST00000639848 PTPN23Q9H3S7 1636 aa31.38■■■□□ 2.61
HLA-B-256ENST00000639848 PPP6R1Q9UPN7 881 aa31.33■■■□□ 2.61
HLA-B-256ENST00000639848 SHANK2Q9UPX8 1470 aa31.31■■■□□ 2.6
HLA-B-256ENST00000639848 PLPPR3Q6T4P5 718 aa31.29■■■□□ 2.6
HLA-B-256ENST00000639848 ABCC5O15440 1437 aa31.29■■■□□ 2.6
HLA-B-256ENST00000639848 LMTK3Q96Q04 1460 aa31.27■■■□□ 2.6
HLA-B-256ENST00000639848 CEBPAP49715 358 aaPredicted RBP31.27■■■□□ 2.6
HLA-B-256ENST00000639848 GGT6Q6P531 493 aa31.27■■■□□ 2.6
HLA-B-256ENST00000639848 DAPK1P53355 1430 aa31.25■■■□□ 2.59
HLA-B-256ENST00000639848 DNMT1P26358 1616 aaKnown RBP31.24■■■□□ 2.59
HLA-B-256ENST00000639848 KIF3BO15066 747 aa31.24■■■□□ 2.59
HLA-B-256ENST00000639848 MROH2AA6NES4 1674 aa31.23■■■□□ 2.59
HLA-B-256ENST00000639848 CROCC2H7BZ55 1655 aa31.22■■■□□ 2.59
HLA-B-256ENST00000639848 C3P01024 1663 aa31.21■■■□□ 2.59
HLA-B-256ENST00000639848 ZMYM3Q14202 1370 aa31.2■■■□□ 2.59
HLA-B-256ENST00000639848 FAM135AQ9P2D6 1515 aa31.2■■■□□ 2.59
HLA-B-256ENST00000639848 DUOX2Q9NRD8 1548 aa31.18■■■□□ 2.58
HLA-B-256ENST00000639848 NPATQ14207 1427 aa31.16■■■□□ 2.58
HLA-B-256ENST00000639848 KIF15Q9NS87 1388 aa31.16■■■□□ 2.58
HLA-B-256ENST00000639848 FAM50AQ14320 339 aaKnown RBP31.15■■■□□ 2.58
HLA-B-256ENST00000639848 EIF2AK4Q9P2K8 1649 aaKnown RBP31.14■■■□□ 2.58
HLA-B-256ENST00000639848 CLTCQ00610 1675 aaKnown RBP31.13■■■□□ 2.57
HLA-B-256ENST00000639848 PREX1Q8TCU6 1659 aa31.13■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms