RNA–Protein interactions for RNA: ENST00000639667.1

HNRNPU-220, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 2

Gene HNRNPU, Length 3,940 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-220ENST00000639667 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.73□□□□□ -1.01
HNRNPU-220ENST00000639667 MYOM3Q5VTT5 1437 aa8.73□□□□□ -1.01
HNRNPU-220ENST00000639667 MLECQ14165 292 aa8.73□□□□□ -1.01
HNRNPU-220ENST00000639667 SPAG9O60271 1321 aaKnown RBP8.72□□□□□ -1.01
HNRNPU-220ENST00000639667 MAP3K1Q13233 1512 aa8.72□□□□□ -1.01
HNRNPU-220ENST00000639667 AKNAQ7Z591 1439 aa8.72□□□□□ -1.01
HNRNPU-220ENST00000639667 RRP7BPQ9NSQ0 103 aa8.72□□□□□ -1.01
HNRNPU-220ENST00000639667 SUPT6HQ7KZ85 1726 aaKnown RBP8.72□□□□□ -1.01
HNRNPU-220ENST00000639667 GPATCH8Q9UKJ3 1502 aaKnown RBP8.72□□□□□ -1.01
HNRNPU-220ENST00000639667 DIP2BQ9P265 1576 aa8.71□□□□□ -1.01
HNRNPU-220ENST00000639667 PCGF6Q9BYE7 350 aa8.71□□□□□ -1.02
HNRNPU-220ENST00000639667 ADGRL1O94910 1474 aa8.71□□□□□ -1.02
HNRNPU-220ENST00000639667 LRRIQ1Q96JM4 1722 aa8.71□□□□□ -1.02
HNRNPU-220ENST00000639667 CFAP43Q8NDM7 1665 aa8.7□□□□□ -1.02
HNRNPU-220ENST00000639667 TTC37Q6PGP7 1564 aa8.7□□□□□ -1.02
HNRNPU-220ENST00000639667 FGD6Q6ZV73 1430 aa8.7□□□□□ -1.02
HNRNPU-220ENST00000639667 TRIM26Q12899 539 aaPredicted RBP8.69□□□□□ -1.02
HNRNPU-220ENST00000639667 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.69□□□□□ -1.022e-14■■■□□ 15.1
HNRNPU-220ENST00000639667 DENND4BO75064 1496 aaPredicted RBP8.69□□□□□ -1.02
HNRNPU-220ENST00000639667 ESF1Q9H501 851 aaKnown RBP8.69□□□□□ -1.02
HNRNPU-220ENST00000639667 RSPH4AQ5TD94 716 aa8.68□□□□□ -1.02
HNRNPU-220ENST00000639667 TRIM52Q96A61 297 aa8.68□□□□□ -1.02
HNRNPU-220ENST00000639667 GLI2P10070 1586 aa8.67□□□□□ -1.02
HNRNPU-220ENST00000639667 MIA2Q96PC5 1412 aa8.66□□□□□ -1.02
HNRNPU-220ENST00000639667 ABCA9Q8IUA7 1624 aa8.66□□□□□ -1.02
HNRNPU-220ENST00000639667 GGT6Q6P531 493 aa8.66□□□□□ -1.02
HNRNPU-220ENST00000639667 CAMSAP2Q08AD1 1489 aa8.66□□□□□ -1.02
HNRNPU-220ENST00000639667 PLEKHH2Q8IVE3 1493 aa8.66□□□□□ -1.02
HNRNPU-220ENST00000639667 TRAPPC8Q9Y2L5 1435 aa8.66□□□□□ -1.02
HNRNPU-220ENST00000639667 NEO1Q92859 1461 aa8.65□□□□□ -1.02
HNRNPU-220ENST00000639667 MYO5CQ9NQX4 1742 aa8.64□□□□□ -1.03
HNRNPU-220ENST00000639667 KIF3BO15066 747 aa8.64□□□□□ -1.03
HNRNPU-220ENST00000639667 SYCP2Q9BX26 1530 aa8.64□□□□□ -1.03
HNRNPU-220ENST00000639667 KIF13AQ9H1H9 1805 aa8.63□□□□□ -1.03
HNRNPU-220ENST00000639667 KDM6BO15054 1643 aa8.62□□□□□ -1.03
HNRNPU-220ENST00000639667 ANKRD30AQ9BXX3 1397 aa8.62□□□□□ -1.03
HNRNPU-220ENST00000639667 ITSN2Q9NZM3 1697 aa8.62□□□□□ -1.03
HNRNPU-220ENST00000639667 PTPN23Q9H3S7 1636 aa8.62□□□□□ -1.03
HNRNPU-220ENST00000639667 MAP3K4Q9Y6R4 1608 aa8.61□□□□□ -1.03
HNRNPU-220ENST00000639667 CCDC141Q6ZP82 1450 aa8.61□□□□□ -1.03
HNRNPU-220ENST00000639667 COL17A1Q9UMD9 1497 aaPredicted RBP8.61□□□□□ -1.03
HNRNPU-220ENST00000639667 PREX2Q70Z35 1606 aa8.61□□□□□ -1.03
HNRNPU-220ENST00000639667 ZNF518AQ6AHZ1 1483 aa8.61□□□□□ -1.03
HNRNPU-220ENST00000639667 C9orf84Q5VXU9 1444 aa8.61□□□□□ -1.03
HNRNPU-220ENST00000639667 KIAA1107Q9UPP5 1409 aa8.61□□□□□ -1.03
HNRNPU-220ENST00000639667 POGZQ7Z3K3 1410 aa8.6□□□□□ -1.03
HNRNPU-220ENST00000639667 CDC42BPAQ5VT25 1732 aa8.6□□□□□ -1.03
HNRNPU-220ENST00000639667 ABCC5O15440 1437 aa8.6□□□□□ -1.03
HNRNPU-220ENST00000639667 DAPK1P53355 1430 aa8.6□□□□□ -1.03
HNRNPU-220ENST00000639667 SAMD9LQ8IVG5 1584 aa8.6□□□□□ -1.03
HNRNPU-220ENST00000639667 CFAP74Q9C0B2 1584 aa8.6□□□□□ -1.03
HNRNPU-220ENST00000639667 ARHGEF12Q9NZN5 1544 aa8.6□□□□□ -1.03
HNRNPU-220ENST00000639667 KIF15Q9NS87 1388 aa8.59□□□□□ -1.03
HNRNPU-220ENST00000639667 RRBP1Q9P2E9 1410 aaKnown RBP8.59□□□□□ -1.03
HNRNPU-220ENST00000639667 YEATS2Q9ULM3 1422 aa8.59□□□□□ -1.03
HNRNPU-220ENST00000639667 CDC42BPBQ9Y5S2 1711 aa8.59□□□□□ -1.03
HNRNPU-220ENST00000639667 ABCC1P33527 1531 aa8.58□□□□□ -1.04
HNRNPU-220ENST00000639667 ARAP3Q8WWN8 1544 aa8.58□□□□□ -1.04
HNRNPU-220ENST00000639667 WASHC2CQ9Y4E1 1318 aa8.56□□□□□ -1.04
HNRNPU-220ENST00000639667 MBD5Q9P267 1494 aa8.56□□□□□ -1.04
HNRNPU-220ENST00000639667 TCOF1Q13428 1488 aaKnown RBP8.56□□□□□ -1.04
HNRNPU-220ENST00000639667 PTPRKQ15262 1439 aa8.55□□□□□ -1.04
HNRNPU-220ENST00000639667 ZFYVE16Q7Z3T8 1539 aa8.55□□□□□ -1.04
HNRNPU-220ENST00000639667 AEBP2Q6ZN18 517 aaPredicted RBP8.55□□□□□ -1.04
HNRNPU-220ENST00000639667 KANK1Q14678 1352 aa8.55□□□□□ -1.04
HNRNPU-220ENST00000639667 PPRC1Q5VV67 1664 aaKnown RBP8.54□□□□□ -1.04
HNRNPU-220ENST00000639667 ATP10AO60312 1499 aa8.54□□□□□ -1.04
HNRNPU-220ENST00000639667 SLC4A1APQ9BWU0 796 aaKnown RBP8.54□□□□□ -1.04
HNRNPU-220ENST00000639667 CHGAP10645 457 aaKnown RBP8.54□□□□□ -1.04
HNRNPU-220ENST00000639667 DHX29Q7Z478 1369 aaKnown RBP8.54□□□□□ -1.04
HNRNPU-220ENST00000639667 NUP155O75694 1391 aa8.53□□□□□ -1.04
HNRNPU-220ENST00000639667 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.53□□□□□ -1.04
HNRNPU-220ENST00000639667 ANKRD50Q9ULJ7 1429 aa8.53□□□□□ -1.04
HNRNPU-220ENST00000639667 ATP7AQ04656 1500 aa8.53□□□□□ -1.04
HNRNPU-220ENST00000639667 A2MP01023 1474 aa8.53□□□□□ -1.04
HNRNPU-220ENST00000639667 NCOA1Q15788 1441 aa8.52□□□□□ -1.04
HNRNPU-220ENST00000639667 RTEL1-TNFRSF6BF6WH68 1400 aa8.52□□□□□ -1.05
HNRNPU-220ENST00000639667 SETD5Q9C0A6 1442 aa8.52□□□□□ -1.05
HNRNPU-220ENST00000639667 CEBPAP49715 358 aaPredicted RBP8.52□□□□□ -1.05
HNRNPU-220ENST00000639667 CCER1Q8TC90 406 aaPredicted RBP8.52□□□□□ -1.05
HNRNPU-220ENST00000639667 STAG3Q9UJ98 1225 aa8.52□□□□□ -1.05
HNRNPU-220ENST00000639667 MLH3Q9UHC1 1453 aa8.52□□□□□ -1.05
HNRNPU-220ENST00000639667 MAGI2Q86UL8 1455 aa8.51□□□□□ -1.05
HNRNPU-220ENST00000639667 ARHGEF5Q12774 1597 aa8.51□□□□□ -1.05
HNRNPU-220ENST00000639667 HECW2Q9P2P5 1572 aa8.51□□□□□ -1.05
HNRNPU-220ENST00000639667 DNMT1P26358 1616 aaKnown RBP8.51□□□□□ -1.05
HNRNPU-220ENST00000639667 RAB3GAP2Q9H2M9 1393 aa8.5□□□□□ -1.05
HNRNPU-220ENST00000639667 FOXD1Q16676 465 aa8.5□□□□□ -1.05
HNRNPU-220ENST00000639667 ROCK1Q13464 1354 aa8.49□□□□□ -1.05
HNRNPU-220ENST00000639667 SENP3Q9H4L4 574 aaPredicted RBP8.49□□□□□ -1.05
HNRNPU-220ENST00000639667 PKD2Q13563 968 aa8.49□□□□□ -1.05
HNRNPU-220ENST00000639667 SHANK2Q9UPX8 1470 aa8.49□□□□□ -1.05
HNRNPU-220ENST00000639667 NEUROD1Q13562 356 aa8.48□□□□□ -1.05
HNRNPU-220ENST00000639667 NAIPQ13075 1403 aa8.48□□□□□ -1.05
HNRNPU-220ENST00000639667 DUOX2Q9NRD8 1548 aa8.47□□□□□ -1.05
HNRNPU-220ENST00000639667 FRMPD1Q5SYB0 1578 aa8.47□□□□□ -1.05
HNRNPU-220ENST00000639667 BCANQ96GW7 911 aa8.47□□□□□ -1.05
HNRNPU-220ENST00000639667 MPHOSPH9Q99550 1183 aa8.47□□□□□ -1.05
HNRNPU-220ENST00000639667 RICTORQ6R327 1708 aa8.47□□□□□ -1.05
HNRNPU-220ENST00000639667 FBXO31Q5XUX0 539 aaPredicted RBP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms