RNA–Protein interactions for RNA: ENST00000639605.1

SPIN3-225, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 2,331 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-225ENST00000639605 ERCC6Q03468 1493 aa18.62■□□□□ 0.57
SPIN3-225ENST00000639605 TROQ12816 1431 aaPredicted RBP18.61■□□□□ 0.57
SPIN3-225ENST00000639605 CEP170Q5SW79 1584 aa18.61■□□□□ 0.57
SPIN3-225ENST00000639605 ABCC5O15440 1437 aa18.6■□□□□ 0.57
SPIN3-225ENST00000639605 ADCY10Q96PN6 1610 aa18.59■□□□□ 0.57
SPIN3-225ENST00000639605 NUP160Q12769 1436 aa18.59■□□□□ 0.57
SPIN3-225ENST00000639605 WASHC2AQ641Q2 1341 aa18.57■□□□□ 0.56
SPIN3-225ENST00000639605 ARID3CA6NKF2 412 aa18.57■□□□□ 0.56
SPIN3-225ENST00000639605 ITSN2Q9NZM3 1697 aa18.57■□□□□ 0.56
SPIN3-225ENST00000639605 MPHOSPH9Q99550 1183 aa18.57■□□□□ 0.56
SPIN3-225ENST00000639605 CARMIL2Q6F5E8 1435 aa18.56■□□□□ 0.56
SPIN3-225ENST00000639605 HSPA5P11021 654 aaKnown RBP18.55■□□□□ 0.56
SPIN3-225ENST00000639605 FOXD1Q16676 465 aa18.54■□□□□ 0.56
SPIN3-225ENST00000639605 CHMP7Q8WUX9 453 aaPredicted RBP18.54■□□□□ 0.56
SPIN3-225ENST00000639605 ANKRD30BQ9BXX2 1392 aa18.51■□□□□ 0.55
SPIN3-225ENST00000639605 ADGRL2O95490 1459 aa18.51■□□□□ 0.55
SPIN3-225ENST00000639605 CAMSAP2Q08AD1 1489 aa18.51■□□□□ 0.55
SPIN3-225ENST00000639605 RPRD2Q5VT52 1461 aaKnown RBP18.51■□□□□ 0.55
SPIN3-225ENST00000639605 ADGBQ8N7X0 1667 aa18.5■□□□□ 0.55
SPIN3-225ENST00000639605 PRG4Q92954 1404 aaPredicted RBP18.5■□□□□ 0.55
SPIN3-225ENST00000639605 GPATCH8Q9UKJ3 1502 aaKnown RBP18.5■□□□□ 0.55
SPIN3-225ENST00000639605 PLB1Q6P1J6 1458 aa18.5■□□□□ 0.55
SPIN3-225ENST00000639605 C11orf95C9JLR9 678 aaPredicted RBP18.49■□□□□ 0.55
SPIN3-225ENST00000639605 CCDC184Q52MB2 194 aa18.49■□□□□ 0.55
SPIN3-225ENST00000639605 NEFLP07196 543 aa18.48■□□□□ 0.55
SPIN3-225ENST00000639605 ABCA8O94911 1581 aa18.48■□□□□ 0.55
SPIN3-225ENST00000639605 CROCC2H7BZ55 1655 aa18.48■□□□□ 0.55
SPIN3-225ENST00000639605 L3MBTL2Q969R5 705 aa18.47■□□□□ 0.55
SPIN3-225ENST00000639605 HNRNPUQ00839 825 aaKnown RBP eCLIP18.46■□□□□ 0.55
SPIN3-225ENST00000639605 TEX14Q8IWB6 1497 aa18.46■□□□□ 0.55
SPIN3-225ENST00000639605 JPH4Q96JJ6 628 aa18.46■□□□□ 0.55
SPIN3-225ENST00000639605 ZNF644Q9H582 1327 aaPredicted RBP18.46■□□□□ 0.55
SPIN3-225ENST00000639605 NCOA1Q15788 1441 aa18.45■□□□□ 0.54
SPIN3-225ENST00000639605 CFDP1Q9UEE9 299 aaPredicted RBP18.45■□□□□ 0.54
SPIN3-225ENST00000639605 KIF14Q15058 1648 aa18.45■□□□□ 0.54
SPIN3-225ENST00000639605 CNTLNQ9NXG0 1405 aa18.44■□□□□ 0.54
SPIN3-225ENST00000639605 EIF4G2P78344 907 aaKnown RBP eCLIP18.44■□□□□ 0.54
SPIN3-225ENST00000639605 ANP32EQ9BTT0 268 aa18.43■□□□□ 0.54
SPIN3-225ENST00000639605 IRX6P78412 446 aaPredicted RBP18.43■□□□□ 0.54
SPIN3-225ENST00000639605 NBPF8Q3BBV2 869 aa18.43■□□□□ 0.54
SPIN3-225ENST00000639605 RBM19Q9Y4C8 960 aaKnown RBP18.43■□□□□ 0.54
SPIN3-225ENST00000639605 PZPP20742 1482 aa18.43■□□□□ 0.54
SPIN3-225ENST00000639605 SHANK2Q9UPX8 1470 aa18.42■□□□□ 0.54
SPIN3-225ENST00000639605 ABCC10Q5T3U5 1492 aa18.4■□□□□ 0.54
SPIN3-225ENST00000639605 ANKRD30AQ9BXX3 1397 aa18.39■□□□□ 0.53
SPIN3-225ENST00000639605 CCDC7Q96M83 1385 aa18.39■□□□□ 0.53
SPIN3-225ENST00000639605 SLC4A1APQ9BWU0 796 aaKnown RBP18.39■□□□□ 0.53
SPIN3-225ENST00000639605 ATP10BO94823 1461 aa18.37■□□□□ 0.53
SPIN3-225ENST00000639605 KIAA1107Q9UPP5 1409 aa18.36■□□□□ 0.53
SPIN3-225ENST00000639605 CDC42BPAQ5VT25 1732 aa18.36■□□□□ 0.53
SPIN3-225ENST00000639605 FBLN2P98095 1184 aa18.35■□□□□ 0.53
SPIN3-225ENST00000639605 POLR1AO95602 1720 aaPredicted RBP18.35■□□□□ 0.53
SPIN3-225ENST00000639605 PLEKHD1A6NEE1 506 aa18.35■□□□□ 0.53
SPIN3-225ENST00000639605 SPATA31E1Q6ZUB1 1445 aa18.35■□□□□ 0.53
SPIN3-225ENST00000639605 MBD5Q9P267 1494 aa18.34■□□□□ 0.53
SPIN3-225ENST00000639605 PRKRIP1Q9H875 184 aaPredicted RBP18.33■□□□□ 0.53
SPIN3-225ENST00000639605 KDM5DQ9BY66 1539 aa18.33■□□□□ 0.52
SPIN3-225ENST00000639605 ARHGEF5Q12774 1597 aa18.32■□□□□ 0.52
SPIN3-225ENST00000639605 ANKRD50Q9ULJ7 1429 aa18.32■□□□□ 0.52
SPIN3-225ENST00000639605 KIF7Q2M1P5 1343 aa18.31■□□□□ 0.52
SPIN3-225ENST00000639605 C9orf84Q5VXU9 1444 aa18.3■□□□□ 0.52
SPIN3-225ENST00000639605 BCORL1Q5H9F3 1711 aa18.28■□□□□ 0.52
SPIN3-225ENST00000639605 MSH5O43196 834 aa18.27■□□□□ 0.52
SPIN3-225ENST00000639605 FAM9BQ8IZU0 186 aa18.27■□□□□ 0.52
SPIN3-225ENST00000639605 ZNF777Q9ULD5 760 aaPredicted RBP18.27■□□□□ 0.51
SPIN3-225ENST00000639605 PTPRGP23470 1445 aa18.26■□□□□ 0.51
SPIN3-225ENST00000639605 MRS2Q9HD23 443 aa18.24■□□□□ 0.51
SPIN3-225ENST00000639605 ARHGEF12Q9NZN5 1544 aa18.24■□□□□ 0.51
SPIN3-225ENST00000639605 UHRF1BP1Q6BDS2 1440 aa18.24■□□□□ 0.51
SPIN3-225ENST00000639605 PREX2Q70Z35 1606 aa18.23■□□□□ 0.51
SPIN3-225ENST00000639605 PKD2Q13563 968 aa18.22■□□□□ 0.51
SPIN3-225ENST00000639605 SHROOM2Q13796 1616 aa18.22■□□□□ 0.51
SPIN3-225ENST00000639605 RSPH4AQ5TD94 716 aa18.21■□□□□ 0.51
SPIN3-225ENST00000639605 TSPY4P0CV99 314 aa18.21■□□□□ 0.51
SPIN3-225ENST00000639605 TSPY10P0CW01 314 aa18.21■□□□□ 0.51
SPIN3-225ENST00000639605 ARID4BQ4LE39 1312 aaPredicted RBP18.21■□□□□ 0.5
SPIN3-225ENST00000639605 DHX29Q7Z478 1369 aaKnown RBP18.2■□□□□ 0.5
SPIN3-225ENST00000639605 CCDC141Q6ZP82 1450 aa18.2■□□□□ 0.5
SPIN3-225ENST00000639605 ZBED9Q6R2W3 1325 aa18.19■□□□□ 0.5
SPIN3-225ENST00000639605 NUP155O75694 1391 aa18.19■□□□□ 0.5
SPIN3-225ENST00000639605 KIF15Q9NS87 1388 aa18.18■□□□□ 0.5
SPIN3-225ENST00000639605 RALGAPBQ86X10 1494 aa18.18■□□□□ 0.5
SPIN3-225ENST00000639605 KDM5CP41229 1560 aa18.18■□□□□ 0.5
SPIN3-225ENST00000639605 SAMD9LQ8IVG5 1584 aa18.18■□□□□ 0.5
SPIN3-225ENST00000639605 MAST1Q9Y2H9 1570 aa18.18■□□□□ 0.5
SPIN3-225ENST00000639605 CDC42BPBQ9Y5S2 1711 aa18.17■□□□□ 0.5
SPIN3-225ENST00000639605 CHD1O14646 1710 aa18.16■□□□□ 0.5
SPIN3-225ENST00000639605 USP47Q96K76 1375 aa18.16■□□□□ 0.5
SPIN3-225ENST00000639605 CNGB1Q14028 1251 aaPredicted RBP18.15■□□□□ 0.5
SPIN3-225ENST00000639605 ZNF326Q5BKZ1 582 aaKnown RBP18.14■□□□□ 0.49
SPIN3-225ENST00000639605 B4GALNT3Q6L9W6 998 aa18.13■□□□□ 0.49
SPIN3-225ENST00000639605 PPP4R2Q9NY27 417 aa18.13■□□□□ 0.49
SPIN3-225ENST00000639605 PLEKHH2Q8IVE3 1493 aa18.12■□□□□ 0.49
SPIN3-225ENST00000639605 ABCC2Q92887 1545 aa18.11■□□□□ 0.49
SPIN3-225ENST00000639605 SENP3-EIF4A1A0A087X0R7 540 aa18.11■□□□□ 0.49
SPIN3-225ENST00000639605 ROCK2O75116 1388 aaKnown RBP18.11■□□□□ 0.49
SPIN3-225ENST00000639605 HNRNPMP52272 730 aaKnown RBP eCLIP18.1■□□□□ 0.49
SPIN3-225ENST00000639605 UNC13BO14795 1591 aa18.1■□□□□ 0.49
SPIN3-225ENST00000639605 FAM135AQ9P2D6 1515 aa18.1■□□□□ 0.49
SPIN3-225ENST00000639605 ERICH6BQ5W0A0 696 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms