RNA–Protein interactions for RNA: ENST00000639470.1

COLCA2-207, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best)

Gene COLCA2, Length 1,207 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-207ENST00000639470 SIGLEC1Q9BZZ2 1709 aa26.55■■□□□ 1.84
COLCA2-207ENST00000639470 MYO5CQ9NQX4 1742 aa26.55■■□□□ 1.84
COLCA2-207ENST00000639470 ARHGAP5Q13017 1502 aa26.55■■□□□ 1.84
COLCA2-207ENST00000639470 ZMYM4Q5VZL5 1548 aa26.55■■□□□ 1.84
COLCA2-207ENST00000639470 ADAMTSL3P82987 1691 aa26.52■■□□□ 1.84
COLCA2-207ENST00000639470 ZFYVE16Q7Z3T8 1539 aa26.52■■□□□ 1.84
COLCA2-207ENST00000639470 LOC105371045A0A1W2PR82 267 aa26.51■■□□□ 1.83
COLCA2-207ENST00000639470 HECW2Q9P2P5 1572 aa26.5■■□□□ 1.83
COLCA2-207ENST00000639470 CEP162Q5TB80 1403 aa26.5■■□□□ 1.83
COLCA2-207ENST00000639470 AFAP1Q8N556 730 aa26.49■■□□□ 1.83
COLCA2-207ENST00000639470 BCORL1Q5H9F3 1711 aa26.48■■□□□ 1.83
COLCA2-207ENST00000639470 PTPRMP28827 1452 aa26.48■■□□□ 1.83
COLCA2-207ENST00000639470 MADDQ8WXG6 1647 aa26.47■■□□□ 1.83
COLCA2-207ENST00000639470 CDC42BPBQ9Y5S2 1711 aa26.45■■□□□ 1.83
COLCA2-207ENST00000639470 ARHGEF12Q9NZN5 1544 aa26.45■■□□□ 1.83
COLCA2-207ENST00000639470 MLECQ14165 292 aa26.44■■□□□ 1.82
COLCA2-207ENST00000639470 PREX2Q70Z35 1606 aa26.43■■□□□ 1.82
COLCA2-207ENST00000639470 TRAPPC8Q9Y2L5 1435 aa26.42■■□□□ 1.82
COLCA2-207ENST00000639470 PLPPR3Q6T4P5 718 aa26.41■■□□□ 1.82
COLCA2-207ENST00000639470 MAGI2Q86UL8 1455 aa26.41■■□□□ 1.82
COLCA2-207ENST00000639470 ZNF518AQ6AHZ1 1483 aa26.37■■□□□ 1.81
COLCA2-207ENST00000639470 ZNF777Q9ULD5 760 aaPredicted RBP26.37■■□□□ 1.81
COLCA2-207ENST00000639470 ABCC1P33527 1531 aa26.37■■□□□ 1.81
COLCA2-207ENST00000639470 KDM5CP41229 1560 aa26.37■■□□□ 1.81
COLCA2-207ENST00000639470 CDC42BPAQ5VT25 1732 aa26.36■■□□□ 1.81
COLCA2-207ENST00000639470 RIMS1Q86UR5 1692 aaKnown RBP26.36■■□□□ 1.81
COLCA2-207ENST00000639470 ATP10AO60312 1499 aa26.36■■□□□ 1.81
COLCA2-207ENST00000639470 GPATCH8Q9UKJ3 1502 aaKnown RBP26.35■■□□□ 1.81
COLCA2-207ENST00000639470 MYT1LQ9UL68 1186 aa26.34■■□□□ 1.81
COLCA2-207ENST00000639470 C9orf84Q5VXU9 1444 aa26.33■■□□□ 1.81
COLCA2-207ENST00000639470 MTUS2Q5JR59 1369 aa26.33■■□□□ 1.8
COLCA2-207ENST00000639470 SAMD9LQ8IVG5 1584 aa26.32■■□□□ 1.8
COLCA2-207ENST00000639470 DIP2CQ9Y2E4 1556 aa26.3■■□□□ 1.8
COLCA2-207ENST00000639470 ITSN2Q9NZM3 1697 aa26.29■■□□□ 1.8
COLCA2-207ENST00000639470 ABCA6Q8N139 1617 aa26.28■■□□□ 1.8
COLCA2-207ENST00000639470 HNRNPMP52272 730 aaKnown RBP eCLIP26.28■■□□□ 1.8
COLCA2-207ENST00000639470 SYCP2Q9BX26 1530 aa26.28■■□□□ 1.8
COLCA2-207ENST00000639470 CCNB3Q8WWL7 1395 aa26.26■■□□□ 1.79
COLCA2-207ENST00000639470 ZNF644Q9H582 1327 aaPredicted RBP26.26■■□□□ 1.79
COLCA2-207ENST00000639470 MLH3Q9UHC1 1453 aa26.24■■□□□ 1.79
COLCA2-207ENST00000639470 CFDP1Q9UEE9 299 aaPredicted RBP26.24■■□□□ 1.79
COLCA2-207ENST00000639470 TIAM1Q13009 1591 aa26.22■■□□□ 1.79
COLCA2-207ENST00000639470 EHBP1L1Q8N3D4 1523 aa26.21■■□□□ 1.79
COLCA2-207ENST00000639470 CEBPAP49715 358 aaPredicted RBP26.21■■□□□ 1.79
COLCA2-207ENST00000639470 LMTK3Q96Q04 1460 aa26.21■■□□□ 1.79
COLCA2-207ENST00000639470 KIDINS220Q9ULH0 1771 aa26.2■■□□□ 1.78
COLCA2-207ENST00000639470 FER1L4A9Z1Z3 1794 aa26.19■■□□□ 1.78
COLCA2-207ENST00000639470 HSPA2P54652 639 aa26.18■■□□□ 1.78
COLCA2-207ENST00000639470 VPS8Q8N3P4 1428 aa26.16■■□□□ 1.78
COLCA2-207ENST00000639470 SPAG9O60271 1321 aaKnown RBP26.14■■□□□ 1.77
COLCA2-207ENST00000639470 REREQ9P2R6 1566 aa26.13■■□□□ 1.77
COLCA2-207ENST00000639470 NCOA2Q15596 1464 aa26.12■■□□□ 1.77
COLCA2-207ENST00000639470 KIAA1107Q9UPP5 1409 aa26.12■■□□□ 1.77
COLCA2-207ENST00000639470 KANK4Q5T7N3 995 aaPredicted RBP26.1■■□□□ 1.77
COLCA2-207ENST00000639470 MBD5Q9P267 1494 aa26.08■■□□□ 1.77
COLCA2-207ENST00000639470 AGLP35573 1532 aa26.08■■□□□ 1.77
COLCA2-207ENST00000639470 ATP7AQ04656 1500 aa26.08■■□□□ 1.77
COLCA2-207ENST00000639470 PLEKHH2Q8IVE3 1493 aa26.07■■□□□ 1.76
COLCA2-207ENST00000639470 INO80Q9ULG1 1556 aaPredicted RBP26.07■■□□□ 1.76
COLCA2-207ENST00000639470 ILDR1Q86SU0 546 aaPredicted RBP26.06■■□□□ 1.76
COLCA2-207ENST00000639470 LRRC9Q6ZRR7 1453 aa26.04■■□□□ 1.76
COLCA2-207ENST00000639470 SUPT6HQ7KZ85 1726 aaKnown RBP26.02■■□□□ 1.76
COLCA2-207ENST00000639470 CAMSAP2Q08AD1 1489 aa26.01■■□□□ 1.75
COLCA2-207ENST00000639470 A2MP01023 1474 aa25.99■■□□□ 1.75
COLCA2-207ENST00000639470 PLXNC1O60486 1568 aa25.97■■□□□ 1.75
COLCA2-207ENST00000639470 C3P01024 1663 aa25.95■■□□□ 1.74
COLCA2-207ENST00000639470 ESF1Q9H501 851 aaKnown RBP25.93■■□□□ 1.74
COLCA2-207ENST00000639470 GGT6Q6P531 493 aa25.92■■□□□ 1.74
COLCA2-207ENST00000639470 CCDC141Q6ZP82 1450 aa25.91■■□□□ 1.74
COLCA2-207ENST00000639470 PREX1Q8TCU6 1659 aa25.9■■□□□ 1.74
COLCA2-207ENST00000639470 MAP3K1Q13233 1512 aa25.88■■□□□ 1.73
COLCA2-207ENST00000639470 UHRF1BP1Q6BDS2 1440 aa25.88■■□□□ 1.73
COLCA2-207ENST00000639470 RTEL1-TNFRSF6BF6WH68 1400 aa25.87■■□□□ 1.73
COLCA2-207ENST00000639470 ZMYM3Q14202 1370 aa25.86■■□□□ 1.73
COLCA2-207ENST00000639470 CNTLNQ9NXG0 1405 aa25.86■■□□□ 1.73
COLCA2-207ENST00000639470 ADGBQ8N7X0 1667 aa25.85■■□□□ 1.73
COLCA2-207ENST00000639470 DHX29Q7Z478 1369 aaKnown RBP25.84■■□□□ 1.73
COLCA2-207ENST00000639470 CLTCQ00610 1675 aaKnown RBP25.83■■□□□ 1.73
COLCA2-207ENST00000639470 MYOM3Q5VTT5 1437 aa25.83■■□□□ 1.73
COLCA2-207ENST00000639470 ARHGEF5Q12774 1597 aa25.81■■□□□ 1.72
COLCA2-207ENST00000639470 KIF3BO15066 747 aa25.8■■□□□ 1.72
COLCA2-207ENST00000639470 MROH2AA6NES4 1674 aa25.77■■□□□ 1.72
COLCA2-207ENST00000639470 PTPRKQ15262 1439 aa25.76■■□□□ 1.71
COLCA2-207ENST00000639470 STRCQ7RTU9 1775 aa25.76■■□□□ 1.71
COLCA2-207ENST00000639470 MIA2Q96PC5 1412 aa25.74■■□□□ 1.71
COLCA2-207ENST00000639470 TSPY4P0CV99 314 aa25.74■■□□□ 1.71
COLCA2-207ENST00000639470 TSPY10P0CW01 314 aa25.74■■□□□ 1.71
COLCA2-207ENST00000639470 APLP2Q06481 763 aa25.74■■□□□ 1.71
COLCA2-207ENST00000639470 RSPH4AQ5TD94 716 aa25.74■■□□□ 1.71
COLCA2-207ENST00000639470 NPATQ14207 1427 aa25.73■■□□□ 1.71
COLCA2-207ENST00000639470 FBXO31Q5XUX0 539 aaPredicted RBP25.71■■□□□ 1.71
COLCA2-207ENST00000639470 SETD1BQ9UPS6 1966 aaKnown RBP25.7■■□□□ 1.7
COLCA2-207ENST00000639470 FBXO41Q8TF61 875 aa25.68■■□□□ 1.7
COLCA2-207ENST00000639470 MAST1Q9Y2H9 1570 aa25.68■■□□□ 1.7
COLCA2-207ENST00000639470 ABCC5O15440 1437 aa25.67■■□□□ 1.7
COLCA2-207ENST00000639470 NCOA1Q15788 1441 aa25.66■■□□□ 1.7
COLCA2-207ENST00000639470 MYO3AQ8NEV4 1616 aa25.66■■□□□ 1.7
COLCA2-207ENST00000639470 PTPN23Q9H3S7 1636 aa25.66■■□□□ 1.7
COLCA2-207ENST00000639470 FGD6Q6ZV73 1430 aa25.65■■□□□ 1.7
COLCA2-207ENST00000639470 KDM5DQ9BY66 1539 aa25.64■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms