RNA–Protein interactions for RNA: ENST00000639456.1

CROCCP2-204, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 2, humanhuman

TSL 5

Gene CROCCP2, Length 2,575 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2-204ENST00000639456 MRC2Q9UBG0 1479 aa24.83■■□□□ 1.57
CROCCP2-204ENST00000639456 FAM9BQ8IZU0 186 aa24.81■■□□□ 1.56
CROCCP2-204ENST00000639456 RBM19Q9Y4C8 960 aaKnown RBP24.8■■□□□ 1.56
CROCCP2-204ENST00000639456 DAPK1P53355 1430 aa24.8■■□□□ 1.56
CROCCP2-204ENST00000639456 ZNF777Q9ULD5 760 aaPredicted RBP24.79■■□□□ 1.56
CROCCP2-204ENST00000639456 AKNAQ7Z591 1439 aa24.78■■□□□ 1.56
CROCCP2-204ENST00000639456 ABCC5O15440 1437 aa24.78■■□□□ 1.56
CROCCP2-204ENST00000639456 ANKRD30BQ9BXX2 1392 aa24.76■■□□□ 1.55
CROCCP2-204ENST00000639456 ZNF326Q5BKZ1 582 aaKnown RBP24.75■■□□□ 1.55
CROCCP2-204ENST00000639456 DISP1Q96F81 1524 aa24.74■■□□□ 1.55
CROCCP2-204ENST00000639456 NUP153P49790 1475 aaKnown RBP24.74■■□□□ 1.55
CROCCP2-204ENST00000639456 CNTLNQ9NXG0 1405 aa24.74■■□□□ 1.55
CROCCP2-204ENST00000639456 CCDC7Q96M83 1385 aa24.74■■□□□ 1.55
CROCCP2-204ENST00000639456 FBLN2P98095 1184 aa24.74■■□□□ 1.55
CROCCP2-204ENST00000639456 PRKRIP1Q9H875 184 aaPredicted RBP24.74■■□□□ 1.55
CROCCP2-204ENST00000639456 ANP32EQ9BTT0 268 aa24.73■■□□□ 1.55
CROCCP2-204ENST00000639456 POLR3GLQ9BT43 218 aa24.73■■□□□ 1.55
CROCCP2-204ENST00000639456 MRS2Q9HD23 443 aa24.72■■□□□ 1.55
CROCCP2-204ENST00000639456 PRG4Q92954 1404 aaPredicted RBP24.72■■□□□ 1.55
CROCCP2-204ENST00000639456 RPRD2Q5VT52 1461 aaKnown RBP24.7■■□□□ 1.54
CROCCP2-204ENST00000639456 KIAA0556O60303 1618 aa24.69■■□□□ 1.54
CROCCP2-204ENST00000639456 CFDP1Q9UEE9 299 aaPredicted RBP24.69■■□□□ 1.54
CROCCP2-204ENST00000639456 NCOA1Q15788 1441 aa24.69■■□□□ 1.54
CROCCP2-204ENST00000639456 KIF7Q2M1P5 1343 aa24.68■■□□□ 1.54
CROCCP2-204ENST00000639456 ERCC6Q03468 1493 aa24.67■■□□□ 1.54
CROCCP2-204ENST00000639456 SENP3-EIF4A1A0A087X0R7 540 aa24.67■■□□□ 1.54
CROCCP2-204ENST00000639456 CDK11AQ9UQ88 783 aaPredicted RBP24.67■■□□□ 1.54
CROCCP2-204ENST00000639456 KIAA0586Q9BVV6 1533 aa24.67■■□□□ 1.54
CROCCP2-204ENST00000639456 DNMT1P26358 1616 aaKnown RBP24.66■■□□□ 1.54
CROCCP2-204ENST00000639456 TEX14Q8IWB6 1497 aa24.66■■□□□ 1.54
CROCCP2-204ENST00000639456 ROCK1Q13464 1354 aa24.66■■□□□ 1.54
CROCCP2-204ENST00000639456 PLB1Q6P1J6 1458 aa24.63■■□□□ 1.53
CROCCP2-204ENST00000639456 RAPGEF6Q8TEU7 1601 aa24.63■■□□□ 1.53
CROCCP2-204ENST00000639456 IFT140Q96RY7 1462 aa24.62■■□□□ 1.53
CROCCP2-204ENST00000639456 CHMP7Q8WUX9 453 aaPredicted RBP24.62■■□□□ 1.53
CROCCP2-204ENST00000639456 GRIN2AQ12879 1464 aa24.61■■□□□ 1.53
CROCCP2-204ENST00000639456 PKD2Q13563 968 aa24.58■■□□□ 1.53
CROCCP2-204ENST00000639456 CAMSAP2Q08AD1 1489 aa24.58■■□□□ 1.53
CROCCP2-204ENST00000639456 SPATA31E1Q6ZUB1 1445 aa24.57■■□□□ 1.52
CROCCP2-204ENST00000639456 PZPP20742 1482 aa24.57■■□□□ 1.52
CROCCP2-204ENST00000639456 EIF4G3O43432 1585 aaKnown RBP24.55■■□□□ 1.52
CROCCP2-204ENST00000639456 TROQ12816 1431 aaPredicted RBP24.54■■□□□ 1.52
CROCCP2-204ENST00000639456 KIF14Q15058 1648 aa24.54■■□□□ 1.52
CROCCP2-204ENST00000639456 GPATCH8Q9UKJ3 1502 aaKnown RBP24.52■■□□□ 1.52
CROCCP2-204ENST00000639456 B4GALNT3Q6L9W6 998 aa24.51■■□□□ 1.51
CROCCP2-204ENST00000639456 MSH5O43196 834 aa24.49■■□□□ 1.51
CROCCP2-204ENST00000639456 USP47Q96K76 1375 aa24.48■■□□□ 1.51
CROCCP2-204ENST00000639456 JPH4Q96JJ6 628 aa24.48■■□□□ 1.51
CROCCP2-204ENST00000639456 KDM2AQ9Y2K7 1162 aa24.48■■□□□ 1.51
CROCCP2-204ENST00000639456 ZBED9Q6R2W3 1325 aa24.48■■□□□ 1.51
CROCCP2-204ENST00000639456 CEP170Q5SW79 1584 aa24.46■■□□□ 1.51
CROCCP2-204ENST00000639456 KIAA1107Q9UPP5 1409 aa24.45■■□□□ 1.5
CROCCP2-204ENST00000639456 PPP4R2Q9NY27 417 aa24.44■■□□□ 1.5
CROCCP2-204ENST00000639456 BCORL1Q5H9F3 1711 aa24.43■■□□□ 1.5
CROCCP2-204ENST00000639456 ANKRD50Q9ULJ7 1429 aa24.42■■□□□ 1.5
CROCCP2-204ENST00000639456 NUP155O75694 1391 aa24.42■■□□□ 1.5
CROCCP2-204ENST00000639456 ANKRD30AQ9BXX3 1397 aa24.42■■□□□ 1.5
CROCCP2-204ENST00000639456 PLEKHD1A6NEE1 506 aa24.41■■□□□ 1.5
CROCCP2-204ENST00000639456 DHX29Q7Z478 1369 aaKnown RBP24.41■■□□□ 1.5
CROCCP2-204ENST00000639456 HNRNPMP52272 730 aaKnown RBP eCLIP24.4■■□□□ 1.5
CROCCP2-204ENST00000639456 ITSN2Q9NZM3 1697 aa24.39■■□□□ 1.49
CROCCP2-204ENST00000639456 CARD11Q9BXL7 1154 aa24.38■■□□□ 1.49
CROCCP2-204ENST00000639456 MBD5Q9P267 1494 aa24.37■■□□□ 1.49
CROCCP2-204ENST00000639456 ADGBQ8N7X0 1667 aa24.37■■□□□ 1.49
CROCCP2-204ENST00000639456 POLR1AO95602 1720 aaPredicted RBP24.37■■□□□ 1.49
CROCCP2-204ENST00000639456 SYNJ2O15056 1496 aa24.35■■□□□ 1.49
CROCCP2-204ENST00000639456 CARMIL2Q6F5E8 1435 aa24.35■■□□□ 1.49
CROCCP2-204ENST00000639456 DCAF11Q8TEB1 546 aa24.34■■□□□ 1.49
CROCCP2-204ENST00000639456 MAGI1Q96QZ7 1491 aaPredicted RBP24.34■■□□□ 1.49
CROCCP2-204ENST00000639456 ADGRL2O95490 1459 aa24.33■■□□□ 1.49
CROCCP2-204ENST00000639456 TSPY4P0CV99 314 aa24.33■■□□□ 1.49
CROCCP2-204ENST00000639456 TSPY10P0CW01 314 aa24.33■■□□□ 1.49
CROCCP2-204ENST00000639456 ST20-MTHFSA0A0A6YYL1 179 aa24.33■■□□□ 1.48
CROCCP2-204ENST00000639456 CROCC2H7BZ55 1655 aa24.32■■□□□ 1.48
CROCCP2-204ENST00000639456 C9orf84Q5VXU9 1444 aa24.31■■□□□ 1.48
CROCCP2-204ENST00000639456 ERICH6BQ5W0A0 696 aa24.3■■□□□ 1.48
CROCCP2-204ENST00000639456 CDC42BPAQ5VT25 1732 aa24.29■■□□□ 1.48
CROCCP2-204ENST00000639456 ATP10BO94823 1461 aa24.29■■□□□ 1.48
CROCCP2-204ENST00000639456 TMC1Q8TDI8 760 aa24.29■■□□□ 1.48
CROCCP2-204ENST00000639456 KDM5CP41229 1560 aa24.29■■□□□ 1.48
CROCCP2-204ENST00000639456 ADCY10Q96PN6 1610 aa24.28■■□□□ 1.48
CROCCP2-204ENST00000639456 RGL3Q3MIN7 710 aa24.25■■□□□ 1.47
CROCCP2-204ENST00000639456 KIF15Q9NS87 1388 aa24.25■■□□□ 1.47
CROCCP2-204ENST00000639456 SALL2Q9Y467 1007 aaPredicted RBP24.25■■□□□ 1.47
CROCCP2-204ENST00000639456 FANCIQ9NVI1 1328 aa24.24■■□□□ 1.47
CROCCP2-204ENST00000639456 PNISRQ8TF01 805 aaKnown RBP24.24■■□□□ 1.47
CROCCP2-204ENST00000639456 ABCC10Q5T3U5 1492 aa24.23■■□□□ 1.47
CROCCP2-204ENST00000639456 NUP160Q12769 1436 aa24.23■■□□□ 1.47
CROCCP2-204ENST00000639456 NUDCQ9Y266 331 aa24.23■■□□□ 1.47
CROCCP2-204ENST00000639456 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.21■■□□□ 1.472e-7■■□□□ 11.9
CROCCP2-204ENST00000639456 ERICH6Q7L0X2 663 aa24.2■■□□□ 1.46
CROCCP2-204ENST00000639456 SMG6Q86US8 1419 aaKnown RBP24.19■■□□□ 1.46
CROCCP2-204ENST00000639456 RALGAPBQ86X10 1494 aa24.19■■□□□ 1.46
CROCCP2-204ENST00000639456 ABCA8O94911 1581 aa24.18■■□□□ 1.46
CROCCP2-204ENST00000639456 ROCK2O75116 1388 aaKnown RBP24.17■■□□□ 1.46
CROCCP2-204ENST00000639456 UHRF1BP1Q6BDS2 1440 aa24.17■■□□□ 1.46
CROCCP2-204ENST00000639456 NBPF1Q3BBV0 1214 aa24.16■■□□□ 1.46
CROCCP2-204ENST00000639456 CCDC136Q96JN2 1154 aa24.14■■□□□ 1.46
CROCCP2-204ENST00000639456 ARID4BQ4LE39 1312 aaPredicted RBP24.14■■□□□ 1.45
CROCCP2-204ENST00000639456 SHANK2Q9UPX8 1470 aa24.12■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms