RNA–Protein interactions for RNA: ENST00000639456.1

CROCCP2-204, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 2, humanhuman

TSL 5

Gene CROCCP2, Length 2,575 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2-204ENST00000639456 NISCHQ9Y2I1 1504 aa36.53■■■■□ 3.44
CROCCP2-204ENST00000639456 SHROOM4Q9ULL8 1493 aa31.74■■■□□ 2.67
CROCCP2-204ENST00000639456 SUPT5HO00267 1087 aaKnown RBP31.18■■■□□ 2.58
CROCCP2-204ENST00000639456 ZCCHC6Q5VYS8 1495 aaKnown RBP30.89■■■□□ 2.53
CROCCP2-204ENST00000639456 DCAF8L2P0C7V8 631 aa30.8■■■□□ 2.52
CROCCP2-204ENST00000639456 CCDC180Q9P1Z9 1646 aa30.77■■■□□ 2.52
CROCCP2-204ENST00000639456 CHIC1Q5VXU3 224 aa30.18■■■□□ 2.42
CROCCP2-204ENST00000639456 MYO15BQ96JP2 1530 aa30.15■■■□□ 2.42
CROCCP2-204ENST00000639456 DCAF1Q9Y4B6 1507 aa29.72■■■□□ 2.35
CROCCP2-204ENST00000639456 PCGF6Q9BYE7 350 aa29.58■■■□□ 2.33
CROCCP2-204ENST00000639456 LOC105371045A0A1W2PR82 267 aa29.51■■■□□ 2.31
CROCCP2-204ENST00000639456 HRCP23327 699 aa29.47■■■□□ 2.31
CROCCP2-204ENST00000639456 SCRIBQ14160 1630 aa29.24■■■□□ 2.27
CROCCP2-204ENST00000639456 ABCC9O60706 1549 aa29.16■■■□□ 2.26
CROCCP2-204ENST00000639456 PPARGC1BQ86YN6 1023 aaKnown RBP29.13■■■□□ 2.25
CROCCP2-204ENST00000639456 RSF1Q96T23 1441 aaPredicted RBP29.06■■■□□ 2.24
CROCCP2-204ENST00000639456 FAM9AQ8IZU1 332 aaPredicted RBP28.89■■■□□ 2.21
CROCCP2-204ENST00000639456 TRIM41Q8WV44 630 aa28.86■■■□□ 2.21
CROCCP2-204ENST00000639456 EHMT2Q96KQ7 1210 aa28.84■■■□□ 2.21
CROCCP2-204ENST00000639456 RB1CC1Q8TDY2 1594 aa28.84■■■□□ 2.21
CROCCP2-204ENST00000639456 TRIM26Q12899 539 aaPredicted RBP28.74■■■□□ 2.19
CROCCP2-204ENST00000639456 CECR2Q9BXF3 1484 aa28.69■■■□□ 2.18
CROCCP2-204ENST00000639456 MROH2BQ7Z745 1585 aa28.53■■■□□ 2.16
CROCCP2-204ENST00000639456 NACADO15069 1562 aa28.49■■■□□ 2.15
CROCCP2-204ENST00000639456 WIZO95785 1651 aa28.41■■■□□ 2.14
CROCCP2-204ENST00000639456 BAZ1AQ9NRL2 1556 aaPredicted RBP28.05■■■□□ 2.08
CROCCP2-204ENST00000639456 ZEB1P37275 1124 aaPredicted RBP28.02■■■□□ 2.08
CROCCP2-204ENST00000639456 ABCC8Q09428 1581 aa27.92■■■□□ 2.06
CROCCP2-204ENST00000639456 TTBK1Q5TCY1 1321 aaPredicted RBP27.9■■■□□ 2.06
CROCCP2-204ENST00000639456 EIF4G1Q04637 1599 aaKnown RBP27.88■■■□□ 2.05
CROCCP2-204ENST00000639456 CCDC88BA6NC98 1476 aa27.82■■■□□ 2.04
CROCCP2-204ENST00000639456 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.81■■■□□ 2.04
CROCCP2-204ENST00000639456 SMARCA4P51532 1647 aa27.79■■■□□ 2.04
CROCCP2-204ENST00000639456 TOP2AP11388 1531 aaKnown RBP27.78■■■□□ 2.04
CROCCP2-204ENST00000639456 PABPN1Q86U42 306 aaKnown RBP eCLIP27.77■■■□□ 2.044e-13■□□□□ 10.5
CROCCP2-204ENST00000639456 UNC13AQ9UPW8 1703 aa27.75■■■□□ 2.03
CROCCP2-204ENST00000639456 SMARCA2P51531 1590 aa27.7■■■□□ 2.03
CROCCP2-204ENST00000639456 SOGA1O94964 1423 aa27.68■■■□□ 2.02
CROCCP2-204ENST00000639456 CCER1Q8TC90 406 aaPredicted RBP27.65■■■□□ 2.02
CROCCP2-204ENST00000639456 RUSC2Q8N2Y8 1516 aa27.57■■■□□ 2
CROCCP2-204ENST00000639456 UBTFP17480 764 aaKnown RBP27.54■■■□□ 2
CROCCP2-204ENST00000639456 CEP162Q5TB80 1403 aa27.54■■■□□ 2
CROCCP2-204ENST00000639456 CSRNP3Q8WYN3 585 aa27.48■■□□□ 1.99
CROCCP2-204ENST00000639456 BICRAQ9NZM4 1560 aa27.41■■□□□ 1.98
CROCCP2-204ENST00000639456 TNIKQ9UKE5 1360 aa27.38■■□□□ 1.97
CROCCP2-204ENST00000639456 SCAF1Q9H7N4 1312 aaKnown RBP27.36■■□□□ 1.97
CROCCP2-204ENST00000639456 WRNQ14191 1432 aaPredicted RBP eCLIP27.36■■□□□ 1.97
CROCCP2-204ENST00000639456 RANGAP1P46060 587 aaPredicted RBP27.23■■□□□ 1.95
CROCCP2-204ENST00000639456 EEA1Q15075 1411 aa27.22■■□□□ 1.95
CROCCP2-204ENST00000639456 GOLGA3Q08378 1498 aa27.2■■□□□ 1.94
CROCCP2-204ENST00000639456 SYNJ1O43426 1573 aa27.17■■□□□ 1.94
CROCCP2-204ENST00000639456 DIEXFQ68CQ4 756 aaKnown RBP27.14■■□□□ 1.94
CROCCP2-204ENST00000639456 HNRNPUL2Q1KMD3 747 aaKnown RBP27.09■■□□□ 1.93
CROCCP2-204ENST00000639456 PEG3Q9GZU2 1588 aa27.08■■□□□ 1.93
CROCCP2-204ENST00000639456 ATAD2BQ9ULI0 1458 aa27.08■■□□□ 1.93
CROCCP2-204ENST00000639456 BAZ1BQ9UIG0 1483 aaKnown RBP27.04■■□□□ 1.92
CROCCP2-204ENST00000639456 NEUROD1Q13562 356 aa27.03■■□□□ 1.92
CROCCP2-204ENST00000639456 CEP164Q9UPV0 1460 aa27.01■■□□□ 1.91
CROCCP2-204ENST00000639456 CLIP1P30622 1438 aa26.99■■□□□ 1.91
CROCCP2-204ENST00000639456 RAPGEF2Q9Y4G8 1499 aa26.95■■□□□ 1.91
CROCCP2-204ENST00000639456 ACIN1Q9UKV3 1341 aaKnown RBP26.95■■□□□ 1.9
CROCCP2-204ENST00000639456 KIF21BO75037 1637 aa26.89■■□□□ 1.9
CROCCP2-204ENST00000639456 APLP2Q06481 763 aa26.86■■□□□ 1.89
CROCCP2-204ENST00000639456 ZNF316A6NFI3 1004 aaPredicted RBP26.83■■□□□ 1.89
CROCCP2-204ENST00000639456 VPS8Q8N3P4 1428 aa26.82■■□□□ 1.88
CROCCP2-204ENST00000639456 GTF3C3Q9Y5Q9 886 aa26.77■■□□□ 1.88
CROCCP2-204ENST00000639456 YTHDC1Q96MU7 727 aaKnown RBP26.73■■□□□ 1.87
CROCCP2-204ENST00000639456 CENPBP07199 599 aaPredicted RBP26.71■■□□□ 1.87
CROCCP2-204ENST00000639456 TOP2BQ02880 1626 aa26.7■■□□□ 1.86
CROCCP2-204ENST00000639456 MIER1Q8N108 512 aa26.6■■□□□ 1.85
CROCCP2-204ENST00000639456 KANK4Q5T7N3 995 aaPredicted RBP26.58■■□□□ 1.85
CROCCP2-204ENST00000639456 PELP1Q8IZL8 1130 aaKnown RBP26.56■■□□□ 1.84
CROCCP2-204ENST00000639456 BIVM-ERCC5R4GMW8 1640 aa26.54■■□□□ 1.84
CROCCP2-204ENST00000639456 CUX1P39880 1505 aa26.51■■□□□ 1.83
CROCCP2-204ENST00000639456 PRXQ9BXM0 1461 aa26.51■■□□□ 1.83
CROCCP2-204ENST00000639456 ARAP1Q96P48 1450 aa26.5■■□□□ 1.83
CROCCP2-204ENST00000639456 NCAPD3P42695 1498 aa26.43■■□□□ 1.82
CROCCP2-204ENST00000639456 ERICH3Q5RHP9 1530 aa26.42■■□□□ 1.82
CROCCP2-204ENST00000639456 ITGAEP38570 1179 aa26.41■■□□□ 1.82
CROCCP2-204ENST00000639456 KIF27Q86VH2 1401 aa26.4■■□□□ 1.82
CROCCP2-204ENST00000639456 HMGXB3Q12766 1538 aa26.37■■□□□ 1.81
CROCCP2-204ENST00000639456 DHX57Q6P158 1386 aaKnown RBP26.35■■□□□ 1.81
CROCCP2-204ENST00000639456 CFTRP13569 1480 aa26.31■■□□□ 1.8
CROCCP2-204ENST00000639456 ARHGAP35Q9NRY4 1499 aa26.26■■□□□ 1.79
CROCCP2-204ENST00000639456 CUX2O14529 1486 aa26.21■■□□□ 1.79
CROCCP2-204ENST00000639456 RRBP1Q9P2E9 1410 aaKnown RBP26.17■■□□□ 1.78
CROCCP2-204ENST00000639456 CCNB3Q8WWL7 1395 aa26.16■■□□□ 1.78
CROCCP2-204ENST00000639456 IGF1RP08069 1367 aa26.16■■□□□ 1.78
CROCCP2-204ENST00000639456 P3H3Q8IVL6 736 aa26.14■■□□□ 1.78
CROCCP2-204ENST00000639456 CLSPNQ9HAW4 1339 aa26.13■■□□□ 1.77
CROCCP2-204ENST00000639456 ATP1B4Q9UN42 357 aaPredicted RBP26.1■■□□□ 1.77
CROCCP2-204ENST00000639456 CC2D2AQ9P2K1 1620 aa26.09■■□□□ 1.77
CROCCP2-204ENST00000639456 CARMIL1Q5VZK9 1371 aa26.06■■□□□ 1.76
CROCCP2-204ENST00000639456 CADPSQ9ULU8 1353 aa26.05■■□□□ 1.76
CROCCP2-204ENST00000639456 FGD5Q6ZNL6 1462 aa26.04■■□□□ 1.76
CROCCP2-204ENST00000639456 RAB3GAP2Q9H2M9 1393 aa26.01■■□□□ 1.75
CROCCP2-204ENST00000639456 FAM50AQ14320 339 aaKnown RBP25.99■■□□□ 1.75
CROCCP2-204ENST00000639456 PRDM2Q13029 1718 aa25.95■■□□□ 1.74
CROCCP2-204ENST00000639456 TIAM1Q13009 1591 aa25.93■■□□□ 1.74
CROCCP2-204ENST00000639456 PHLDB1Q86UU1 1377 aa25.93■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms