RNA–Protein interactions for RNA: ENST00000639257.1

SPIN3-220, Transcript of spindlin family member 3, humanhuman

TSL 3

Gene SPIN3, Length 1,009 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-220ENST00000639257 CDC42BPAQ5VT25 1732 aa28.55■■■□□ 2.16
SPIN3-220ENST00000639257 ARHGAP5Q13017 1502 aa28.54■■■□□ 2.16
SPIN3-220ENST00000639257 EHBP1L1Q8N3D4 1523 aa28.54■■■□□ 2.16
SPIN3-220ENST00000639257 POGZQ7Z3K3 1410 aa28.52■■■□□ 2.16
SPIN3-220ENST00000639257 SCAPERQ9BY12 1400 aa28.52■■■□□ 2.16
SPIN3-220ENST00000639257 MTUS2Q5JR59 1369 aa28.51■■■□□ 2.16
SPIN3-220ENST00000639257 TIAM1Q13009 1591 aa28.51■■■□□ 2.15
SPIN3-220ENST00000639257 KDM4FA0A1W2PPD8 638 aa28.51■■■□□ 2.15
SPIN3-220ENST00000639257 GPATCH8Q9UKJ3 1502 aaKnown RBP28.51■■■□□ 2.15
SPIN3-220ENST00000639257 MAP3K1Q13233 1512 aa28.49■■■□□ 2.15
SPIN3-220ENST00000639257 ARHGEF40Q8TER5 1519 aa28.48■■■□□ 2.15
SPIN3-220ENST00000639257 MAGI2Q86UL8 1455 aa28.47■■■□□ 2.15
SPIN3-220ENST00000639257 ABCC1P33527 1531 aa28.46■■■□□ 2.15
SPIN3-220ENST00000639257 KDM5CP41229 1560 aa28.45■■■□□ 2.14
SPIN3-220ENST00000639257 ZNF518AQ6AHZ1 1483 aa28.42■■■□□ 2.14
SPIN3-220ENST00000639257 ARHGEF12Q9NZN5 1544 aa28.42■■■□□ 2.14
SPIN3-220ENST00000639257 SAMD9LQ8IVG5 1584 aa28.4■■■□□ 2.14
SPIN3-220ENST00000639257 LRRC9Q6ZRR7 1453 aa28.4■■■□□ 2.14
SPIN3-220ENST00000639257 ITSN2Q9NZM3 1697 aa28.38■■■□□ 2.13
SPIN3-220ENST00000639257 ZFYVE16Q7Z3T8 1539 aa28.38■■■□□ 2.13
SPIN3-220ENST00000639257 YEATS2Q9ULM3 1422 aa28.38■■■□□ 2.13
SPIN3-220ENST00000639257 CCNB3Q8WWL7 1395 aa28.37■■■□□ 2.13
SPIN3-220ENST00000639257 SUPT6HQ7KZ85 1726 aaKnown RBP28.36■■■□□ 2.13
SPIN3-220ENST00000639257 NCOA2Q15596 1464 aa28.35■■■□□ 2.13
SPIN3-220ENST00000639257 AEBP2Q6ZN18 517 aaPredicted RBP28.34■■■□□ 2.13
SPIN3-220ENST00000639257 KIAA1107Q9UPP5 1409 aa28.34■■■□□ 2.13
SPIN3-220ENST00000639257 TRAPPC8Q9Y2L5 1435 aa28.34■■■□□ 2.13
SPIN3-220ENST00000639257 MLH3Q9UHC1 1453 aa28.33■■■□□ 2.13
SPIN3-220ENST00000639257 AFAP1Q8N556 730 aa28.31■■■□□ 2.12
SPIN3-220ENST00000639257 HECW2Q9P2P5 1572 aa28.3■■■□□ 2.12
SPIN3-220ENST00000639257 PLEKHH2Q8IVE3 1493 aa28.3■■■□□ 2.12
SPIN3-220ENST00000639257 CFDP1Q9UEE9 299 aaPredicted RBP28.3■■■□□ 2.12
SPIN3-220ENST00000639257 SIGLEC1Q9BZZ2 1709 aa28.29■■■□□ 2.12
SPIN3-220ENST00000639257 SYCP2Q9BX26 1530 aa28.28■■■□□ 2.12
SPIN3-220ENST00000639257 ADAMTSL3P82987 1691 aa28.28■■■□□ 2.12
SPIN3-220ENST00000639257 KANK4Q5T7N3 995 aaPredicted RBP28.27■■■□□ 2.12
SPIN3-220ENST00000639257 BCORL1Q5H9F3 1711 aa28.26■■■□□ 2.12
SPIN3-220ENST00000639257 ATP10AO60312 1499 aa28.26■■■□□ 2.11
SPIN3-220ENST00000639257 REREQ9P2R6 1566 aa28.24■■■□□ 2.11
SPIN3-220ENST00000639257 DIP2CQ9Y2E4 1556 aa28.24■■■□□ 2.11
SPIN3-220ENST00000639257 C9orf84Q5VXU9 1444 aa28.23■■■□□ 2.11
SPIN3-220ENST00000639257 MBD5Q9P267 1494 aa28.22■■■□□ 2.11
SPIN3-220ENST00000639257 KIDINS220Q9ULH0 1771 aa28.22■■■□□ 2.11
SPIN3-220ENST00000639257 ZNF777Q9ULD5 760 aaPredicted RBP28.21■■■□□ 2.11
SPIN3-220ENST00000639257 ABCA6Q8N139 1617 aa28.21■■■□□ 2.11
SPIN3-220ENST00000639257 ZNF644Q9H582 1327 aaPredicted RBP28.18■■■□□ 2.1
SPIN3-220ENST00000639257 HNRNPMP52272 730 aaKnown RBP eCLIP28.17■■■□□ 2.1
SPIN3-220ENST00000639257 INO80Q9ULG1 1556 aaPredicted RBP28.16■■■□□ 2.1
SPIN3-220ENST00000639257 CAMSAP2Q08AD1 1489 aa28.14■■■□□ 2.09
SPIN3-220ENST00000639257 AGLP35573 1532 aa28.13■■■□□ 2.09
SPIN3-220ENST00000639257 MYOM3Q5VTT5 1437 aa28.12■■■□□ 2.09
SPIN3-220ENST00000639257 MADDQ8WXG6 1647 aa28.12■■■□□ 2.09
SPIN3-220ENST00000639257 ATP7AQ04656 1500 aa28.12■■■□□ 2.09
SPIN3-220ENST00000639257 MIA2Q96PC5 1412 aa28.11■■■□□ 2.09
SPIN3-220ENST00000639257 ARID4BQ4LE39 1312 aaPredicted RBP28.11■■■□□ 2.09
SPIN3-220ENST00000639257 ARHGEF5Q12774 1597 aa28.09■■■□□ 2.09
SPIN3-220ENST00000639257 APLP2Q06481 763 aa28.09■■■□□ 2.09
SPIN3-220ENST00000639257 SPAG9O60271 1321 aaKnown RBP28.09■■■□□ 2.09
SPIN3-220ENST00000639257 PTPRMP28827 1452 aa28.08■■■□□ 2.09
SPIN3-220ENST00000639257 RTEL1-TNFRSF6BF6WH68 1400 aa28.07■■■□□ 2.08
SPIN3-220ENST00000639257 CCDC141Q6ZP82 1450 aa28.06■■■□□ 2.08
SPIN3-220ENST00000639257 PLXNC1O60486 1568 aa28.04■■■□□ 2.08
SPIN3-220ENST00000639257 RSPH4AQ5TD94 716 aa28.04■■■□□ 2.08
SPIN3-220ENST00000639257 RIMS1Q86UR5 1692 aaKnown RBP28■■■□□ 2.07
SPIN3-220ENST00000639257 MYT1LQ9UL68 1186 aa27.99■■■□□ 2.07
SPIN3-220ENST00000639257 FER1L4A9Z1Z3 1794 aa27.99■■■□□ 2.07
SPIN3-220ENST00000639257 ADGBQ8N7X0 1667 aa27.97■■■□□ 2.07
SPIN3-220ENST00000639257 A2MP01023 1474 aa27.96■■■□□ 2.07
SPIN3-220ENST00000639257 MAST1Q9Y2H9 1570 aa27.95■■■□□ 2.07
SPIN3-220ENST00000639257 TCOF1Q13428 1488 aaKnown RBP27.95■■■□□ 2.06
SPIN3-220ENST00000639257 FGD6Q6ZV73 1430 aa27.94■■■□□ 2.06
SPIN3-220ENST00000639257 PTPN23Q9H3S7 1636 aa27.92■■■□□ 2.06
SPIN3-220ENST00000639257 MLECQ14165 292 aa27.91■■■□□ 2.06
SPIN3-220ENST00000639257 DHX29Q7Z478 1369 aaKnown RBP27.87■■■□□ 2.05
SPIN3-220ENST00000639257 SHANK2Q9UPX8 1470 aa27.85■■■□□ 2.05
SPIN3-220ENST00000639257 CROCC2H7BZ55 1655 aa27.84■■■□□ 2.05
SPIN3-220ENST00000639257 ABCC5O15440 1437 aa27.84■■■□□ 2.05
SPIN3-220ENST00000639257 DNMT1P26358 1616 aaKnown RBP27.83■■■□□ 2.05
SPIN3-220ENST00000639257 TSPY4P0CV99 314 aa27.83■■■□□ 2.05
SPIN3-220ENST00000639257 TSPY10P0CW01 314 aa27.83■■■□□ 2.05
SPIN3-220ENST00000639257 CNTLNQ9NXG0 1405 aa27.81■■■□□ 2.04
SPIN3-220ENST00000639257 DAPK1P53355 1430 aa27.79■■■□□ 2.04
SPIN3-220ENST00000639257 MROH2AA6NES4 1674 aa27.78■■■□□ 2.04
SPIN3-220ENST00000639257 LMTK3Q96Q04 1460 aa27.76■■■□□ 2.04
SPIN3-220ENST00000639257 C3P01024 1663 aa27.76■■■□□ 2.03
SPIN3-220ENST00000639257 PPP6R1Q9UPN7 881 aa27.76■■■□□ 2.03
SPIN3-220ENST00000639257 FAM135AQ9P2D6 1515 aa27.74■■■□□ 2.03
SPIN3-220ENST00000639257 EIF2AK4Q9P2K8 1649 aaKnown RBP27.72■■■□□ 2.03
SPIN3-220ENST00000639257 CEBPAP49715 358 aaPredicted RBP27.7■■■□□ 2.02
SPIN3-220ENST00000639257 DUOX2Q9NRD8 1548 aa27.7■■■□□ 2.02
SPIN3-220ENST00000639257 RNF17Q9BXT8 1623 aaKnown RBP27.7■■■□□ 2.02
SPIN3-220ENST00000639257 SETD1BQ9UPS6 1966 aaKnown RBP27.68■■■□□ 2.02
SPIN3-220ENST00000639257 CLTCQ00610 1675 aaKnown RBP27.68■■■□□ 2.02
SPIN3-220ENST00000639257 ADGRL2O95490 1459 aa27.67■■■□□ 2.02
SPIN3-220ENST00000639257 PREX1Q8TCU6 1659 aa27.66■■■□□ 2.02
SPIN3-220ENST00000639257 ZMYM3Q14202 1370 aa27.66■■■□□ 2.02
SPIN3-220ENST00000639257 KIF3BO15066 747 aa27.66■■■□□ 2.02
SPIN3-220ENST00000639257 GGT6Q6P531 493 aa27.66■■■□□ 2.02
SPIN3-220ENST00000639257 ESF1Q9H501 851 aaKnown RBP27.65■■■□□ 2.02
SPIN3-220ENST00000639257 NPATQ14207 1427 aa27.65■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms