RNA–Protein interactions for RNA: ENST00000638716.1

HNRNPU-216, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5 BASIC

Gene HNRNPU, Length 2,640 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-216ENST00000638716 KIAA0556O60303 1618 aa13.27□□□□□ -0.28
HNRNPU-216ENST00000638716 ROCK1Q13464 1354 aa13.26□□□□□ -0.29
HNRNPU-216ENST00000638716 CNTLNQ9NXG0 1405 aa13.26□□□□□ -0.29
HNRNPU-216ENST00000638716 RAPGEF6Q8TEU7 1601 aa13.25□□□□□ -0.29
HNRNPU-216ENST00000638716 RPRD2Q5VT52 1461 aaKnown RBP13.25□□□□□ -0.29
HNRNPU-216ENST00000638716 ABCC5O15440 1437 aa13.25□□□□□ -0.29
HNRNPU-216ENST00000638716 ANKRD30BQ9BXX2 1392 aa13.25□□□□□ -0.29
HNRNPU-216ENST00000638716 ANP32EQ9BTT0 268 aa13.25□□□□□ -0.29
HNRNPU-216ENST00000638716 DISP1Q96F81 1524 aa13.25□□□□□ -0.29
HNRNPU-216ENST00000638716 ZNF608Q9ULD9 1512 aaPredicted RBP13.24□□□□□ -0.29
HNRNPU-216ENST00000638716 NCOA1Q15788 1441 aa13.24□□□□□ -0.29
HNRNPU-216ENST00000638716 C11orf95C9JLR9 678 aaPredicted RBP13.24□□□□□ -0.29
HNRNPU-216ENST00000638716 RBM19Q9Y4C8 960 aaKnown RBP13.23□□□□□ -0.29
HNRNPU-216ENST00000638716 KIAA0586Q9BVV6 1533 aa13.23□□□□□ -0.29
HNRNPU-216ENST00000638716 NUP153P49790 1475 aaKnown RBP13.23□□□□□ -0.29
HNRNPU-216ENST00000638716 CCDC7Q96M83 1385 aa13.23□□□□□ -0.29
HNRNPU-216ENST00000638716 TEX14Q8IWB6 1497 aa13.23□□□□□ -0.29
HNRNPU-216ENST00000638716 ZNF644Q9H582 1327 aaPredicted RBP13.22□□□□□ -0.29
HNRNPU-216ENST00000638716 IFT140Q96RY7 1462 aa13.22□□□□□ -0.29
HNRNPU-216ENST00000638716 NBPF8Q3BBV2 869 aa13.22□□□□□ -0.29
HNRNPU-216ENST00000638716 CCDC184Q52MB2 194 aa13.21□□□□□ -0.29
HNRNPU-216ENST00000638716 ADGBQ8N7X0 1667 aa13.21□□□□□ -0.3
HNRNPU-216ENST00000638716 ITSN2Q9NZM3 1697 aa13.2□□□□□ -0.3
HNRNPU-216ENST00000638716 SLC4A1APQ9BWU0 796 aaKnown RBP13.19□□□□□ -0.3
HNRNPU-216ENST00000638716 PRKRIP1Q9H875 184 aaPredicted RBP13.19□□□□□ -0.3
HNRNPU-216ENST00000638716 CDK11AQ9UQ88 783 aaPredicted RBP13.18□□□□□ -0.3
HNRNPU-216ENST00000638716 SPATA31E1Q6ZUB1 1445 aa13.18□□□□□ -0.3
HNRNPU-216ENST00000638716 GRIN2AQ12879 1464 aa13.18□□□□□ -0.3
HNRNPU-216ENST00000638716 IRX6P78412 446 aaPredicted RBP13.17□□□□□ -0.3
HNRNPU-216ENST00000638716 EIF4G3O43432 1585 aaKnown RBP13.17□□□□□ -0.3
HNRNPU-216ENST00000638716 CROCC2H7BZ55 1655 aa13.17□□□□□ -0.3
HNRNPU-216ENST00000638716 PZPP20742 1482 aa13.16□□□□□ -0.3
HNRNPU-216ENST00000638716 CAMSAP2Q08AD1 1489 aa13.16□□□□□ -0.3
HNRNPU-216ENST00000638716 ADCY10Q96PN6 1610 aa13.15□□□□□ -0.3
HNRNPU-216ENST00000638716 PRG4Q92954 1404 aaPredicted RBP13.15□□□□□ -0.3
HNRNPU-216ENST00000638716 FAM9BQ8IZU0 186 aa13.15□□□□□ -0.3
HNRNPU-216ENST00000638716 KIF7Q2M1P5 1343 aa13.15□□□□□ -0.3
HNRNPU-216ENST00000638716 TROQ12816 1431 aaPredicted RBP13.15□□□□□ -0.3
HNRNPU-216ENST00000638716 KIF14Q15058 1648 aa13.14□□□□□ -0.31
HNRNPU-216ENST00000638716 MRS2Q9HD23 443 aa13.14□□□□□ -0.31
HNRNPU-216ENST00000638716 GPATCH8Q9UKJ3 1502 aaKnown RBP13.12□□□□□ -0.31
HNRNPU-216ENST00000638716 CFDP1Q9UEE9 299 aaPredicted RBP13.12□□□□□ -0.31
HNRNPU-216ENST00000638716 BCORL1Q5H9F3 1711 aa13.12□□□□□ -0.31
HNRNPU-216ENST00000638716 ERICH6BQ5W0A0 696 aa13.12□□□□□ -0.31
HNRNPU-216ENST00000638716 CEP170Q5SW79 1584 aa13.11□□□□□ -0.31
HNRNPU-216ENST00000638716 PLB1Q6P1J6 1458 aa13.11□□□□□ -0.31
HNRNPU-216ENST00000638716 MBD5Q9P267 1494 aa13.11□□□□□ -0.31
HNRNPU-216ENST00000638716 ZBED9Q6R2W3 1325 aa13.11□□□□□ -0.31
HNRNPU-216ENST00000638716 ADGRL2O95490 1459 aa13.11□□□□□ -0.31
HNRNPU-216ENST00000638716 CDC42BPAQ5VT25 1732 aa13.1□□□□□ -0.31
HNRNPU-216ENST00000638716 KIAA1107Q9UPP5 1409 aa13.1□□□□□ -0.31
HNRNPU-216ENST00000638716 ZNF777Q9ULD5 760 aaPredicted RBP13.09□□□□□ -0.31
HNRNPU-216ENST00000638716 PPP4R2Q9NY27 417 aa13.09□□□□□ -0.31
HNRNPU-216ENST00000638716 MAGI1Q96QZ7 1491 aaPredicted RBP13.08□□□□□ -0.32
HNRNPU-216ENST00000638716 KDM5CP41229 1560 aa13.08□□□□□ -0.32
HNRNPU-216ENST00000638716 ANKRD30AQ9BXX3 1397 aa13.06□□□□□ -0.32
HNRNPU-216ENST00000638716 PKD2Q13563 968 aa13.06□□□□□ -0.32
HNRNPU-216ENST00000638716 SYNJ2O15056 1496 aa13.06□□□□□ -0.32
HNRNPU-216ENST00000638716 DHX29Q7Z478 1369 aaKnown RBP13.06□□□□□ -0.32
HNRNPU-216ENST00000638716 USP47Q96K76 1375 aa13.06□□□□□ -0.32
HNRNPU-216ENST00000638716 CHMP7Q8WUX9 453 aaPredicted RBP13.06□□□□□ -0.32
HNRNPU-216ENST00000638716 MSH5O43196 834 aa13.05□□□□□ -0.32
HNRNPU-216ENST00000638716 ANKRD50Q9ULJ7 1429 aa13.04□□□□□ -0.32
HNRNPU-216ENST00000638716 ZNF326Q5BKZ1 582 aaKnown RBP13.04□□□□□ -0.32
HNRNPU-216ENST00000638716 OSCARQ8IYS5 282 aa13.04□□□□□ -0.32
HNRNPU-216ENST00000638716 CARMIL2Q6F5E8 1435 aa13.03□□□□□ -0.32
HNRNPU-216ENST00000638716 FANCIQ9NVI1 1328 aa13.03□□□□□ -0.32
HNRNPU-216ENST00000638716 POLR3GLQ9BT43 218 aa13.02□□□□□ -0.32
HNRNPU-216ENST00000638716 JPH4Q96JJ6 628 aa13.02□□□□□ -0.33
HNRNPU-216ENST00000638716 FBLN2P98095 1184 aa13.01□□□□□ -0.33
HNRNPU-216ENST00000638716 UHRF1BP1Q6BDS2 1440 aa13.01□□□□□ -0.33
HNRNPU-216ENST00000638716 ABCA8O94911 1581 aa13.01□□□□□ -0.33
HNRNPU-216ENST00000638716 B4GALNT3Q6L9W6 998 aa13.01□□□□□ -0.33
HNRNPU-216ENST00000638716 ARID4BQ4LE39 1312 aaPredicted RBP13.01□□□□□ -0.33
HNRNPU-216ENST00000638716 ABCC10Q5T3U5 1492 aa13□□□□□ -0.33
HNRNPU-216ENST00000638716 RALGAPBQ86X10 1494 aa13□□□□□ -0.33
HNRNPU-216ENST00000638716 SHANK2Q9UPX8 1470 aa13□□□□□ -0.33
HNRNPU-216ENST00000638716 NUP160Q12769 1436 aa13□□□□□ -0.33
HNRNPU-216ENST00000638716 CNGB1Q14028 1251 aaPredicted RBP13□□□□□ -0.33
HNRNPU-216ENST00000638716 C9orf84Q5VXU9 1444 aa12.99□□□□□ -0.33
HNRNPU-216ENST00000638716 NUP155O75694 1391 aa12.99□□□□□ -0.33
HNRNPU-216ENST00000638716 PLEKHD1A6NEE1 506 aa12.99□□□□□ -0.33
HNRNPU-216ENST00000638716 SMG6Q86US8 1419 aaKnown RBP12.99□□□□□ -0.33
HNRNPU-216ENST00000638716 KDM5DQ9BY66 1539 aa12.99□□□□□ -0.33
HNRNPU-216ENST00000638716 ARHGEF12Q9NZN5 1544 aa12.98□□□□□ -0.33
HNRNPU-216ENST00000638716 ATP10BO94823 1461 aa12.98□□□□□ -0.33
HNRNPU-216ENST00000638716 ROCK2O75116 1388 aaKnown RBP12.96□□□□□ -0.33
HNRNPU-216ENST00000638716 CARD11Q9BXL7 1154 aa12.96□□□□□ -0.33
HNRNPU-216ENST00000638716 NUDCQ9Y266 331 aa12.95□□□□□ -0.34
HNRNPU-216ENST00000638716 E9PCH4 1651 aa12.95□□□□□ -0.34
HNRNPU-216ENST00000638716 CDC42BPBQ9Y5S2 1711 aa12.95□□□□□ -0.34
HNRNPU-216ENST00000638716 TSPY4P0CV99 314 aa12.95□□□□□ -0.34
HNRNPU-216ENST00000638716 TSPY10P0CW01 314 aa12.95□□□□□ -0.34
HNRNPU-216ENST00000638716 ARHGEF5Q12774 1597 aa12.95□□□□□ -0.34
HNRNPU-216ENST00000638716 PNISRQ8TF01 805 aaKnown RBP12.94□□□□□ -0.34
HNRNPU-216ENST00000638716 KDM2AQ9Y2K7 1162 aa12.93□□□□□ -0.34
HNRNPU-216ENST00000638716 PTPRGP23470 1445 aa12.93□□□□□ -0.34
HNRNPU-216ENST00000638716 KIF15Q9NS87 1388 aa12.93□□□□□ -0.34
HNRNPU-216ENST00000638716 HNRNPMP52272 730 aaKnown RBP eCLIP12.92□□□□□ -0.34
HNRNPU-216ENST00000638716 RNF123Q5XPI4 1314 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms