RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 EHBP1L1Q8N3D4 1523 aa34.5■■■■□ 3.11
SCN1B-206ENST00000638536 RICTORQ6R327 1708 aa34.48■■■■□ 3.11
SCN1B-206ENST00000638536 ADGRL1O94910 1474 aa34.47■■■■□ 3.11
SCN1B-206ENST00000638536 DENND4BO75064 1496 aaPredicted RBP34.46■■■■□ 3.11
SCN1B-206ENST00000638536 GPATCH8Q9UKJ3 1502 aaKnown RBP34.45■■■■□ 3.11
SCN1B-206ENST00000638536 SCAPERQ9BY12 1400 aa34.44■■■■□ 3.1
SCN1B-206ENST00000638536 KANK4Q5T7N3 995 aaPredicted RBP34.44■■■■□ 3.1
SCN1B-206ENST00000638536 LRRC9Q6ZRR7 1453 aa34.41■■■■□ 3.1
SCN1B-206ENST00000638536 MAP3K1Q13233 1512 aa34.39■■■■□ 3.1
SCN1B-206ENST00000638536 CCNB3Q8WWL7 1395 aa34.38■■■■□ 3.09
SCN1B-206ENST00000638536 SUPT6HQ7KZ85 1726 aaKnown RBP34.36■■■■□ 3.09
SCN1B-206ENST00000638536 NCOA2Q15596 1464 aa34.35■■■■□ 3.09
SCN1B-206ENST00000638536 POGZQ7Z3K3 1410 aa34.34■■■■□ 3.09
SCN1B-206ENST00000638536 ARHGEF12Q9NZN5 1544 aa34.34■■■■□ 3.09
SCN1B-206ENST00000638536 ZNF777Q9ULD5 760 aaPredicted RBP34.33■■■■□ 3.09
SCN1B-206ENST00000638536 SAMD9LQ8IVG5 1584 aa34.32■■■■□ 3.08
SCN1B-206ENST00000638536 ABCC1P33527 1531 aa34.3■■■■□ 3.08
SCN1B-206ENST00000638536 CFDP1Q9UEE9 299 aaPredicted RBP34.3■■■■□ 3.08
SCN1B-206ENST00000638536 AFAP1Q8N556 730 aa34.29■■■■□ 3.08
SCN1B-206ENST00000638536 ZMYM4Q5VZL5 1548 aa34.28■■■■□ 3.08
SCN1B-206ENST00000638536 ITSN2Q9NZM3 1697 aa34.27■■■■□ 3.08
SCN1B-206ENST00000638536 KDM4FA0A1W2PPD8 638 aa34.26■■■■□ 3.08
SCN1B-206ENST00000638536 TRAPPC8Q9Y2L5 1435 aa34.26■■■■□ 3.07
SCN1B-206ENST00000638536 YEATS2Q9ULM3 1422 aa34.24■■■■□ 3.07
SCN1B-206ENST00000638536 APLP2Q06481 763 aa34.24■■■■□ 3.07
SCN1B-206ENST00000638536 ZNF644Q9H582 1327 aaPredicted RBP34.24■■■■□ 3.07
SCN1B-206ENST00000638536 ZNF518AQ6AHZ1 1483 aa34.22■■■■□ 3.07
SCN1B-206ENST00000638536 KDM5CP41229 1560 aa34.2■■■■□ 3.07
SCN1B-206ENST00000638536 ARHGEF40Q8TER5 1519 aa34.2■■■■□ 3.07
SCN1B-206ENST00000638536 SYCP2Q9BX26 1530 aa34.2■■■■□ 3.07
SCN1B-206ENST00000638536 HNRNPMP52272 730 aaKnown RBP eCLIP34.2■■■■□ 3.07
SCN1B-206ENST00000638536 ZFYVE16Q7Z3T8 1539 aa34.18■■■■□ 3.06
SCN1B-206ENST00000638536 MAGI2Q86UL8 1455 aa34.16■■■■□ 3.06
SCN1B-206ENST00000638536 SIGLEC1Q9BZZ2 1709 aa34.14■■■■□ 3.06
SCN1B-206ENST00000638536 KIAA1107Q9UPP5 1409 aa34.12■■■■□ 3.05
SCN1B-206ENST00000638536 HECW2Q9P2P5 1572 aa34.1■■■■□ 3.05
SCN1B-206ENST00000638536 PLEKHH2Q8IVE3 1493 aa34.09■■■■□ 3.05
SCN1B-206ENST00000638536 CAMSAP2Q08AD1 1489 aa34.07■■■■□ 3.04
SCN1B-206ENST00000638536 MBD5Q9P267 1494 aa34.07■■■■□ 3.04
SCN1B-206ENST00000638536 MLH3Q9UHC1 1453 aa34.07■■■■□ 3.04
SCN1B-206ENST00000638536 KIDINS220Q9ULH0 1771 aa34.06■■■■□ 3.04
SCN1B-206ENST00000638536 MYT1LQ9UL68 1186 aa34.06■■■■□ 3.04
SCN1B-206ENST00000638536 AEBP2Q6ZN18 517 aaPredicted RBP34.04■■■■□ 3.04
SCN1B-206ENST00000638536 MYOM3Q5VTT5 1437 aa34.04■■■■□ 3.04
SCN1B-206ENST00000638536 ABCA6Q8N139 1617 aa34.03■■■■□ 3.04
SCN1B-206ENST00000638536 ARID4BQ4LE39 1312 aaPredicted RBP34.03■■■■□ 3.04
SCN1B-206ENST00000638536 ATP10AO60312 1499 aa34.03■■■■□ 3.04
SCN1B-206ENST00000638536 DIP2CQ9Y2E4 1556 aa34.03■■■■□ 3.04
SCN1B-206ENST00000638536 SPAG9O60271 1321 aaKnown RBP33.98■■■■□ 3.03
SCN1B-206ENST00000638536 BCORL1Q5H9F3 1711 aa33.97■■■■□ 3.03
SCN1B-206ENST00000638536 C9orf84Q5VXU9 1444 aa33.96■■■■□ 3.03
SCN1B-206ENST00000638536 MIA2Q96PC5 1412 aa33.95■■■■□ 3.03
SCN1B-206ENST00000638536 PPARGC1BQ86YN6 1023 aaKnown RBP33.94■■■■□ 3.02
SCN1B-206ENST00000638536 ADAMTSL3P82987 1691 aa33.94■■■■□ 3.02
SCN1B-206ENST00000638536 INO80Q9ULG1 1556 aaPredicted RBP33.94■■■■□ 3.02
SCN1B-206ENST00000638536 ATP7AQ04656 1500 aa33.93■■■■□ 3.02
SCN1B-206ENST00000638536 CCDC141Q6ZP82 1450 aa33.89■■■■□ 3.02
SCN1B-206ENST00000638536 MLECQ14165 292 aa33.88■■■■□ 3.01
SCN1B-206ENST00000638536 ARHGEF5Q12774 1597 aa33.87■■■■□ 3.01
SCN1B-206ENST00000638536 PTPN23Q9H3S7 1636 aa33.87■■■■□ 3.01
SCN1B-206ENST00000638536 REREQ9P2R6 1566 aa33.86■■■■□ 3.01
SCN1B-206ENST00000638536 MADDQ8WXG6 1647 aa33.86■■■■□ 3.01
SCN1B-206ENST00000638536 FGD6Q6ZV73 1430 aa33.86■■■■□ 3.01
SCN1B-206ENST00000638536 RSPH4AQ5TD94 716 aa33.82■■■■□ 3
SCN1B-206ENST00000638536 RTEL1-TNFRSF6BF6WH68 1400 aa33.8■■■■□ 3
SCN1B-206ENST00000638536 TCOF1Q13428 1488 aaKnown RBP33.77■■■■□ 3
SCN1B-206ENST00000638536 RIMS1Q86UR5 1692 aaKnown RBP33.76■■■■□ 3
SCN1B-206ENST00000638536 AGLP35573 1532 aa33.76■■■□□ 2.99
SCN1B-206ENST00000638536 ADGBQ8N7X0 1667 aa33.76■■■□□ 2.99
SCN1B-206ENST00000638536 A2MP01023 1474 aa33.74■■■□□ 2.99
SCN1B-206ENST00000638536 TSPY4P0CV99 314 aa33.74■■■□□ 2.99
SCN1B-206ENST00000638536 TSPY10P0CW01 314 aa33.74■■■□□ 2.99
SCN1B-206ENST00000638536 PTPRMP28827 1452 aa33.74■■■□□ 2.99
SCN1B-206ENST00000638536 PLXNC1O60486 1568 aa33.73■■■□□ 2.99
SCN1B-206ENST00000638536 FER1L4A9Z1Z3 1794 aa33.73■■■□□ 2.99
SCN1B-206ENST00000638536 ABCC5O15440 1437 aa33.71■■■□□ 2.99
SCN1B-206ENST00000638536 MAST1Q9Y2H9 1570 aa33.69■■■□□ 2.98
SCN1B-206ENST00000638536 CROCC2H7BZ55 1655 aa33.67■■■□□ 2.98
SCN1B-206ENST00000638536 DNMT1P26358 1616 aaKnown RBP33.67■■■□□ 2.98
SCN1B-206ENST00000638536 DAPK1P53355 1430 aa33.66■■■□□ 2.98
SCN1B-206ENST00000638536 FAM50AQ14320 339 aaKnown RBP33.65■■■□□ 2.98
SCN1B-206ENST00000638536 DHX29Q7Z478 1369 aaKnown RBP33.64■■■□□ 2.98
SCN1B-206ENST00000638536 PLPPR3Q6T4P5 718 aa33.61■■■□□ 2.97
SCN1B-206ENST00000638536 SHANK2Q9UPX8 1470 aa33.57■■■□□ 2.96
SCN1B-206ENST00000638536 CHIC2Q9UKJ5 165 aa33.57■■■□□ 2.96
SCN1B-206ENST00000638536 GGT6Q6P531 493 aa33.56■■■□□ 2.96
SCN1B-206ENST00000638536 CEBPAP49715 358 aaPredicted RBP33.54■■■□□ 2.96
SCN1B-206ENST00000638536 KIF3BO15066 747 aa33.53■■■□□ 2.96
SCN1B-206ENST00000638536 RRP7BPQ9NSQ0 103 aa33.51■■■□□ 2.96
SCN1B-206ENST00000638536 PTPRKQ15262 1439 aa33.49■■■□□ 2.95
SCN1B-206ENST00000638536 KIF15Q9NS87 1388 aa33.47■■■□□ 2.95
SCN1B-206ENST00000638536 C3P01024 1663 aa33.46■■■□□ 2.95
SCN1B-206ENST00000638536 CLTCQ00610 1675 aaKnown RBP33.46■■■□□ 2.95
SCN1B-206ENST00000638536 ESF1Q9H501 851 aaKnown RBP33.45■■■□□ 2.95
SCN1B-206ENST00000638536 DUOX2Q9NRD8 1548 aa33.44■■■□□ 2.94
SCN1B-206ENST00000638536 NCOA1Q15788 1441 aa33.43■■■□□ 2.94
SCN1B-206ENST00000638536 RRBP1Q9P2E9 1410 aaKnown RBP33.4■■■□□ 2.94
SCN1B-206ENST00000638536 ANKRD30AQ9BXX3 1397 aa33.4■■■□□ 2.94
SCN1B-206ENST00000638536 ADGRL2O95490 1459 aa33.4■■■□□ 2.94
SCN1B-206ENST00000638536 CNTLNQ9NXG0 1405 aa33.4■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms