RNA–Protein interactions for RNA: ENST00000638514.1

KCNMA1-238, Transcript of potassium calcium-activated channel subfamily M alpha 1, human

APPRIS ALT2 TSL 5

Gene KCNMA1, Length 3,711 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KCNMA1-238	ENST00000638514	SNAPC4	Q5SXM2	1469 aa		18.33	■□□□□ 0.52
KCNMA1-238	ENST00000638514	KIF7	Q2M1P5	1343 aa		18.33	■□□□□ 0.52
KCNMA1-238	ENST00000638514	CADPS	Q9ULU8	1353 aa		18.3	■□□□□ 0.52
KCNMA1-238	ENST00000638514	EIF5B	O60841	1220 aa	Known RBP	18.3	■□□□□ 0.52
KCNMA1-238	ENST00000638514	KDM2A	Q9Y2K7	1162 aa		18.3	■□□□□ 0.52
KCNMA1-238	ENST00000638514	NPM2	Q86SE8	214 aa	Known RBP	18.3	■□□□□ 0.52
KCNMA1-238	ENST00000638514	USP35	Q9P2H5	1018 aa		18.3	■□□□□ 0.52
KCNMA1-238	ENST00000638514	ABCA5	Q8WWZ7	1642 aa		18.29	■□□□□ 0.52
KCNMA1-238	ENST00000638514	MPHOSPH9	Q99550	1183 aa		18.28	■□□□□ 0.52
KCNMA1-238	ENST00000638514	SUPT6H	Q7KZ85	1726 aa	Known RBP	18.28	■□□□□ 0.52
KCNMA1-238	ENST00000638514	GCC2	Q8IWJ2	1684 aa		18.28	■□□□□ 0.52
KCNMA1-238	ENST00000638514	NEFM	P07197	916 aa		18.28	■□□□□ 0.52
KCNMA1-238	ENST00000638514	RAD54L2	Q9Y4B4	1467 aa		18.28	■□□□□ 0.52
KCNMA1-238	ENST00000638514	CHMP7	Q8WUX9	453 aa	Predicted RBP	18.28	■□□□□ 0.52
KCNMA1-238	ENST00000638514	SENP3	Q9H4L4	574 aa	Predicted RBP	18.28	■□□□□ 0.52
KCNMA1-238	ENST00000638514	NBPF8	Q3BBV2	869 aa		18.26	■□□□□ 0.51
KCNMA1-238	ENST00000638514	LAS1L	Q9Y4W2	734 aa	Known RBP	18.26	■□□□□ 0.51
KCNMA1-238	ENST00000638514	CTTNBP2	Q8WZ74	1663 aa		18.26	■□□□□ 0.51
KCNMA1-238	ENST00000638514	POLR1A	O95602	1720 aa	Predicted RBP	18.26	■□□□□ 0.51
KCNMA1-238	ENST00000638514	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	18.25	■□□□□ 0.51
KCNMA1-238	ENST00000638514	EHBP1L1	Q8N3D4	1523 aa		18.25	■□□□□ 0.51
KCNMA1-238	ENST00000638514	TCERG1	O14776	1098 aa	Known RBP	18.24	■□□□□ 0.51
KCNMA1-238	ENST00000638514	SPATA31E1	Q6ZUB1	1445 aa		18.24	■□□□□ 0.51
KCNMA1-238	ENST00000638514	PPM1G	O15355	546 aa	Predicted RBP	18.22	■□□□□ 0.51
KCNMA1-238	ENST00000638514	UGGT2	Q9NYU1	1516 aa		18.22	■□□□□ 0.51
KCNMA1-238	ENST00000638514	LRRIQ1	Q96JM4	1722 aa		18.22	■□□□□ 0.51
KCNMA1-238	ENST00000638514	KDM6B	O15054	1643 aa		18.21	■□□□□ 0.51
KCNMA1-238	ENST00000638514	DHX29	Q7Z478	1369 aa	Known RBP	18.21	■□□□□ 0.51
KCNMA1-238	ENST00000638514	WASHC2C	Q9Y4E1	1318 aa		18.21	■□□□□ 0.51
KCNMA1-238	ENST00000638514	PDE4A	P27815	886 aa		18.2	■□□□□ 0.5
KCNMA1-238	ENST00000638514	GRIN2B	Q13224	1484 aa		18.2	■□□□□ 0.5
KCNMA1-238	ENST00000638514	NES	P48681	1621 aa		18.2	■□□□□ 0.5
KCNMA1-238	ENST00000638514	SLC4A1AP	Q9BWU0	796 aa	Known RBP	18.2	■□□□□ 0.5
KCNMA1-238	ENST00000638514	BRPF3	Q9ULD4	1205 aa		18.2	■□□□□ 0.5
KCNMA1-238	ENST00000638514	TCOF1	Q13428	1488 aa	Known RBP	18.2	■□□□□ 0.5
KCNMA1-238	ENST00000638514	RPRD2	Q5VT52	1461 aa	Known RBP	18.2	■□□□□ 0.5
KCNMA1-238	ENST00000638514	CC2D2A	Q9P2K1	1620 aa		18.19	■□□□□ 0.5
KCNMA1-238	ENST00000638514	CUL7	Q14999	1698 aa		18.19	■□□□□ 0.5
KCNMA1-238	ENST00000638514	THOC2	Q8NI27	1593 aa	Known RBP	18.19	■□□□□ 0.5
KCNMA1-238	ENST00000638514	TEX14	Q8IWB6	1497 aa		18.19	■□□□□ 0.5
KCNMA1-238	ENST00000638514	ANKRD30B	Q9BXX2	1392 aa		18.17	■□□□□ 0.5
KCNMA1-238	ENST00000638514	ARHGEF11	O15085	1522 aa		18.17	■□□□□ 0.5
KCNMA1-238	ENST00000638514	BACH2	Q9BYV9	841 aa		18.16	■□□□□ 0.5
KCNMA1-238	ENST00000638514	ABCA10	Q8WWZ4	1543 aa		18.16	■□□□□ 0.5
KCNMA1-238	ENST00000638514	RRP1	P56182	461 aa	Known RBP	18.16	■□□□□ 0.5
KCNMA1-238	ENST00000638514	PNISR	Q8TF01	805 aa	Known RBP	18.16	■□□□□ 0.5
KCNMA1-238	ENST00000638514	MIA2	Q96PC5	1412 aa		18.15	■□□□□ 0.5
KCNMA1-238	ENST00000638514	MS4A1	P11836	297 aa		18.15	■□□□□ 0.5
KCNMA1-238	ENST00000638514	EXOC6	Q8TAG9	804 aa		18.15	■□□□□ 0.5
KCNMA1-238	ENST00000638514	TMC1	Q8TDI8	760 aa		18.15	■□□□□ 0.5
KCNMA1-238	ENST00000638514	SAMD9	Q5K651	1589 aa		18.14	■□□□□ 0.5
KCNMA1-238	ENST00000638514	PKNOX2	Q96KN3	472 aa		18.14	■□□□□ 0.49
KCNMA1-238	ENST00000638514	RGL3	Q3MIN7	710 aa		18.14	■□□□□ 0.49
KCNMA1-238	ENST00000638514	FANCD2	Q9BXW9	1451 aa		18.12	■□□□□ 0.49
KCNMA1-238	ENST00000638514	MAGI3	Q5TCQ9	1506 aa		18.11	■□□□□ 0.49
KCNMA1-238	ENST00000638514	DDRGK1	Q96HY6	314 aa		18.1	■□□□□ 0.49
KCNMA1-238	ENST00000638514	RCAN3	Q9UKA8	241 aa		18.08	■□□□□ 0.49
KCNMA1-238	ENST00000638514	GSE1	Q14687	1217 aa		18.08	■□□□□ 0.48
KCNMA1-238	ENST00000638514	CFDP1	Q9UEE9	299 aa	Predicted RBP	18.08	■□□□□ 0.48
KCNMA1-238	ENST00000638514	ARID4B	Q4LE39	1312 aa	Predicted RBP	18.08	■□□□□ 0.48
KCNMA1-238	ENST00000638514	USP47	Q96K76	1375 aa		18.08	■□□□□ 0.48
KCNMA1-238	ENST00000638514	DNMBP	Q6XZF7	1577 aa		18.07	■□□□□ 0.48
KCNMA1-238	ENST00000638514	POLA1	P09884	1462 aa	Predicted RBP	18.07	■□□□□ 0.48
KCNMA1-238	ENST00000638514	LRPPRC	P42704	1394 aa	Known RBP	18.06	■□□□□ 0.48
KCNMA1-238	ENST00000638514	BCORL1	Q5H9F3	1711 aa		18.06	■□□□□ 0.48
KCNMA1-238	ENST00000638514	ROCK2	O75116	1388 aa	Known RBP	18.04	■□□□□ 0.48
KCNMA1-238	ENST00000638514	KIF15	Q9NS87	1388 aa		18.02	■□□□□ 0.48
KCNMA1-238	ENST00000638514	ZNF644	Q9H582	1327 aa	Predicted RBP	18.02	■□□□□ 0.48
KCNMA1-238	ENST00000638514	BRD4	O60885	1362 aa	Predicted RBP	18.02	■□□□□ 0.48
KCNMA1-238	ENST00000638514	ROCK1	Q13464	1354 aa		18.02	■□□□□ 0.48
KCNMA1-238	ENST00000638514	NFKBIB	Q15653	356 aa		18.01	■□□□□ 0.47
KCNMA1-238	ENST00000638514	KIF21A	Q7Z4S6	1674 aa		18.01	■□□□□ 0.47
KCNMA1-238	ENST00000638514	TOPBP1	Q92547	1522 aa		18.01	■□□□□ 0.47
KCNMA1-238	ENST00000638514	MYBBP1A	Q9BQG0	1328 aa	Known RBP	18	■□□□□ 0.47
KCNMA1-238	ENST00000638514	MBD5	Q9P267	1494 aa		17.99	■□□□□ 0.47
KCNMA1-238	ENST00000638514	PDE3B	Q13370	1112 aa		17.99	■□□□□ 0.47
KCNMA1-238	ENST00000638514	DAPK1	P53355	1430 aa		17.98	■□□□□ 0.47
KCNMA1-238	ENST00000638514	RALBP1	Q15311	655 aa		17.98	■□□□□ 0.47
KCNMA1-238	ENST00000638514	TSPY4	P0CV99	314 aa		17.97	■□□□□ 0.47
KCNMA1-238	ENST00000638514	TSPY10	P0CW01	314 aa		17.97	■□□□□ 0.47
KCNMA1-238	ENST00000638514	FRAT1	Q92837	279 aa	Predicted RBP	17.97	■□□□□ 0.47
KCNMA1-238	ENST00000638514	DAXX	Q9UER7	740 aa	Predicted RBP	17.97	■□□□□ 0.47
KCNMA1-238	ENST00000638514	KTN1	Q86UP2	1357 aa	Known RBP	17.97	■□□□□ 0.47
KCNMA1-238	ENST00000638514	KDM5C	P41229	1560 aa		17.97	■□□□□ 0.47
KCNMA1-238	ENST00000638514	KIF14	Q15058	1648 aa		17.95	■□□□□ 0.46
KCNMA1-238	ENST00000638514	PLEKHD1	A6NEE1	506 aa		17.95	■□□□□ 0.46
KCNMA1-238	ENST00000638514	EPRS	P07814	1512 aa	Known RBP	17.95	■□□□□ 0.46
KCNMA1-238	ENST00000638514	CHGA	P10645	457 aa	Known RBP	17.94	■□□□□ 0.46
KCNMA1-238	ENST00000638514	PDS5B	Q9NTI5	1447 aa		17.93	■□□□□ 0.46
KCNMA1-238	ENST00000638514	ABCC5	O15440	1437 aa		17.93	■□□□□ 0.46
KCNMA1-238	ENST00000638514	SLC4A3	P48751	1232 aa		17.92	■□□□□ 0.46
KCNMA1-238	ENST00000638514	RSPH6A	Q9H0K4	717 aa		17.92	■□□□□ 0.46
KCNMA1-238	ENST00000638514	PZP	P20742	1482 aa		17.91	■□□□□ 0.46
KCNMA1-238	ENST00000638514	SKAP1	Q86WV1	359 aa		17.91	■□□□□ 0.46
KCNMA1-238	ENST00000638514	DNMT1	P26358	1616 aa	Known RBP	17.91	■□□□□ 0.46
KCNMA1-238	ENST00000638514	ERCC6	Q03468	1493 aa		17.91	■□□□□ 0.46
KCNMA1-238	ENST00000638514	CRBN	Q96SW2	442 aa		17.9	■□□□□ 0.46
KCNMA1-238	ENST00000638514	CDK13	Q14004	1512 aa	Known RBP	17.9	■□□□□ 0.46
KCNMA1-238	ENST00000638514	PLIN1	O60240	522 aa		17.9	■□□□□ 0.46
KCNMA1-238	ENST00000638514	CARD11	Q9BXL7	1154 aa		17.89	■□□□□ 0.45

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