RNA–Protein interactions for RNA: ENST00000638237.1

NECAP1-210, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene NECAP1, Length 2,517 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-210ENST00000638237 DENND4BO75064 1496 aaPredicted RBP12.26□□□□□ -0.45
NECAP1-210ENST00000638237 SYNJ2O15056 1496 aa12.26□□□□□ -0.45
NECAP1-210ENST00000638237 TRIM52Q96A61 297 aa12.26□□□□□ -0.45
NECAP1-210ENST00000638237 ANP32EQ9BTT0 268 aa12.25□□□□□ -0.45
NECAP1-210ENST00000638237 PRG4Q92954 1404 aaPredicted RBP12.24□□□□□ -0.45
NECAP1-210ENST00000638237 TIMELESSQ9UNS1 1208 aa12.24□□□□□ -0.45
NECAP1-210ENST00000638237 KIF14Q15058 1648 aa12.23□□□□□ -0.45
NECAP1-210ENST00000638237 MIA2Q96PC5 1412 aa12.23□□□□□ -0.45
NECAP1-210ENST00000638237 KDM5BQ9UGL1 1544 aa12.22□□□□□ -0.45
NECAP1-210ENST00000638237 DAPK1P53355 1430 aa12.21□□□□□ -0.46
NECAP1-210ENST00000638237 DNMT1P26358 1616 aaKnown RBP12.2□□□□□ -0.46
NECAP1-210ENST00000638237 JPH4Q96JJ6 628 aa12.2□□□□□ -0.46
NECAP1-210ENST00000638237 ABCC5O15440 1437 aa12.19□□□□□ -0.46
NECAP1-210ENST00000638237 NUP160Q12769 1436 aa12.19□□□□□ -0.46
NECAP1-210ENST00000638237 FKBP8Q14318 412 aa12.18□□□□□ -0.46
NECAP1-210ENST00000638237 ZNF777Q9ULD5 760 aaPredicted RBP12.18□□□□□ -0.46
NECAP1-210ENST00000638237 CCER2I3L3R5 266 aa12.17□□□□□ -0.46
NECAP1-210ENST00000638237 MPHOSPH9Q99550 1183 aa12.17□□□□□ -0.46
NECAP1-210ENST00000638237 TROQ12816 1431 aaPredicted RBP12.17□□□□□ -0.46
NECAP1-210ENST00000638237 AKNAQ7Z591 1439 aa12.17□□□□□ -0.46
NECAP1-210ENST00000638237 CAMSAP2Q08AD1 1489 aa12.16□□□□□ -0.46
NECAP1-210ENST00000638237 CDK11AQ9UQ88 783 aaPredicted RBP12.16□□□□□ -0.46
NECAP1-210ENST00000638237 BCANQ96GW7 911 aa12.16□□□□□ -0.46
NECAP1-210ENST00000638237 ITSN2Q9NZM3 1697 aa12.15□□□□□ -0.46
NECAP1-210ENST00000638237 CFDP1Q9UEE9 299 aaPredicted RBP12.15□□□□□ -0.46
NECAP1-210ENST00000638237 CARMIL2Q6F5E8 1435 aa12.15□□□□□ -0.46
NECAP1-210ENST00000638237 CDC42BPAQ5VT25 1732 aa12.14□□□□□ -0.47
NECAP1-210ENST00000638237 GPATCH8Q9UKJ3 1502 aaKnown RBP12.14□□□□□ -0.47
NECAP1-210ENST00000638237 CHD1O14646 1710 aa12.13□□□□□ -0.47
NECAP1-210ENST00000638237 NEFLP07196 543 aa12.13□□□□□ -0.47
NECAP1-210ENST00000638237 ADCY10Q96PN6 1610 aa12.13□□□□□ -0.47
NECAP1-210ENST00000638237 ANP32CO43423 234 aa12.12□□□□□ -0.47
NECAP1-210ENST00000638237 CROCC2H7BZ55 1655 aa12.11□□□□□ -0.47
NECAP1-210ENST00000638237 ADGBQ8N7X0 1667 aa12.11□□□□□ -0.47
NECAP1-210ENST00000638237 L3MBTL2Q969R5 705 aa12.11□□□□□ -0.47
NECAP1-210ENST00000638237 DAXXQ9UER7 740 aaPredicted RBP12.11□□□□□ -0.47
NECAP1-210ENST00000638237 ROCK1Q13464 1354 aa12.11□□□□□ -0.47
NECAP1-210ENST00000638237 ABCA8O94911 1581 aa12.11□□□□□ -0.47
NECAP1-210ENST00000638237 SLC4A1APQ9BWU0 796 aaKnown RBP12.1□□□□□ -0.47
NECAP1-210ENST00000638237 ATP10BO94823 1461 aa12.09□□□□□ -0.47
NECAP1-210ENST00000638237 RBM19Q9Y4C8 960 aaKnown RBP12.08□□□□□ -0.48
NECAP1-210ENST00000638237 NCOA1Q15788 1441 aa12.08□□□□□ -0.48
NECAP1-210ENST00000638237 ANKRD30BQ9BXX2 1392 aa12.08□□□□□ -0.48
NECAP1-210ENST00000638237 HSPA5P11021 654 aaKnown RBP12.08□□□□□ -0.48
NECAP1-210ENST00000638237 PLEKHD1A6NEE1 506 aa12.07□□□□□ -0.48
NECAP1-210ENST00000638237 PZPP20742 1482 aa12.06□□□□□ -0.48
NECAP1-210ENST00000638237 WASHC2AQ641Q2 1341 aa12.06□□□□□ -0.48
NECAP1-210ENST00000638237 RPRD2Q5VT52 1461 aaKnown RBP12.06□□□□□ -0.48
NECAP1-210ENST00000638237 TEX14Q8IWB6 1497 aa12.06□□□□□ -0.48
NECAP1-210ENST00000638237 NBPF8Q3BBV2 869 aa12.05□□□□□ -0.48
NECAP1-210ENST00000638237 ABCC10Q5T3U5 1492 aa12.05□□□□□ -0.48
NECAP1-210ENST00000638237 ERCC6L2Q5T890 1561 aa12.04□□□□□ -0.48
NECAP1-210ENST00000638237 PTPRGP23470 1445 aa12.03□□□□□ -0.48
NECAP1-210ENST00000638237 CDC42BPBQ9Y5S2 1711 aa12.03□□□□□ -0.48
NECAP1-210ENST00000638237 C11orf95C9JLR9 678 aaPredicted RBP12.02□□□□□ -0.48
NECAP1-210ENST00000638237 HNRNPMP52272 730 aaKnown RBP eCLIP12.02□□□□□ -0.49
NECAP1-210ENST00000638237 EIF4G2P78344 907 aaKnown RBP eCLIP12.02□□□□□ -0.49
NECAP1-210ENST00000638237 ADGRL2O95490 1459 aa12.02□□□□□ -0.49
NECAP1-210ENST00000638237 ANKRD50Q9ULJ7 1429 aa12.01□□□□□ -0.49
NECAP1-210ENST00000638237 C9orf84Q5VXU9 1444 aa12.01□□□□□ -0.49
NECAP1-210ENST00000638237 ZNF326Q5BKZ1 582 aaKnown RBP12.01□□□□□ -0.49
NECAP1-210ENST00000638237 ANKRD30AQ9BXX3 1397 aa12.01□□□□□ -0.49
NECAP1-210ENST00000638237 PKD2Q13563 968 aa12□□□□□ -0.49
NECAP1-210ENST00000638237 SAMD9LQ8IVG5 1584 aa11.99□□□□□ -0.49
NECAP1-210ENST00000638237 BCL11AQ9H165 835 aa11.98□□□□□ -0.49
NECAP1-210ENST00000638237 TTC37Q6PGP7 1564 aa11.98□□□□□ -0.49
NECAP1-210ENST00000638237 PREX2Q70Z35 1606 aa11.97□□□□□ -0.49
NECAP1-210ENST00000638237 KIAA1107Q9UPP5 1409 aa11.97□□□□□ -0.49
NECAP1-210ENST00000638237 NUP155O75694 1391 aa11.97□□□□□ -0.49
NECAP1-210ENST00000638237 SHROOM2Q13796 1616 aa11.96□□□□□ -0.49
NECAP1-210ENST00000638237 KIF15Q9NS87 1388 aa11.96□□□□□ -0.5
NECAP1-210ENST00000638237 TSPY4P0CV99 314 aa11.95□□□□□ -0.5
NECAP1-210ENST00000638237 TSPY10P0CW01 314 aa11.95□□□□□ -0.5
NECAP1-210ENST00000638237 MBD5Q9P267 1494 aa11.95□□□□□ -0.5
NECAP1-210ENST00000638237 POLR1AO95602 1720 aaPredicted RBP11.95□□□□□ -0.5
NECAP1-210ENST00000638237 SYCP2Q9BX26 1530 aa11.95□□□□□ -0.5
NECAP1-210ENST00000638237 SHANK2Q9UPX8 1470 aa11.95□□□□□ -0.5
NECAP1-210ENST00000638237 FANCIQ9NVI1 1328 aa11.94□□□□□ -0.5
NECAP1-210ENST00000638237 CNGB1Q14028 1251 aaPredicted RBP11.94□□□□□ -0.5
NECAP1-210ENST00000638237 CCDC184Q52MB2 194 aa11.94□□□□□ -0.5
NECAP1-210ENST00000638237 ERICH6Q7L0X2 663 aa11.94□□□□□ -0.5
NECAP1-210ENST00000638237 CCDC7Q96M83 1385 aa11.94□□□□□ -0.5
NECAP1-210ENST00000638237 HNRNPUQ00839 825 aaKnown RBP eCLIP11.94□□□□□ -0.5
NECAP1-210ENST00000638237 CNTLNQ9NXG0 1405 aa11.94□□□□□ -0.5
NECAP1-210ENST00000638237 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.93□□□□□ -0.5
NECAP1-210ENST00000638237 BCORL1Q5H9F3 1711 aa11.93□□□□□ -0.5
NECAP1-210ENST00000638237 SPATA31E1Q6ZUB1 1445 aa11.93□□□□□ -0.5
NECAP1-210ENST00000638237 ERICH6BQ5W0A0 696 aa11.93□□□□□ -0.5
NECAP1-210ENST00000638237 ARHGAP5Q13017 1502 aa11.93□□□□□ -0.5
NECAP1-210ENST00000638237 ARHGEF5Q12774 1597 aa11.92□□□□□ -0.5
NECAP1-210ENST00000638237 KIF7Q2M1P5 1343 aa11.92□□□□□ -0.5
NECAP1-210ENST00000638237 MYO5CQ9NQX4 1742 aa11.92□□□□□ -0.5
NECAP1-210ENST00000638237 POLR3GLQ9BT43 218 aa11.92□□□□□ -0.5
NECAP1-210ENST00000638237 CCDC141Q6ZP82 1450 aa11.92□□□□□ -0.5
NECAP1-210ENST00000638237 ABCC2Q92887 1545 aa11.9□□□□□ -0.5
NECAP1-210ENST00000638237 KDM2AQ9Y2K7 1162 aa11.9□□□□□ -0.5
NECAP1-210ENST00000638237 USP47Q96K76 1375 aa11.89□□□□□ -0.51
NECAP1-210ENST00000638237 ZCCHC11Q5TAX3 1644 aaKnown RBP11.88□□□□□ -0.51
NECAP1-210ENST00000638237 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.88□□□□□ -0.51
NECAP1-210ENST00000638237 KDM5DQ9BY66 1539 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 124 ms