RNA–Protein interactions for RNA: ENST00000638144.1

CLN6-225, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 576 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-225ENST00000638144 EHBP1L1Q8N3D4 1523 aa19.89■□□□□ 0.77
CLN6-225ENST00000638144 ADGRL1O94910 1474 aa19.88■□□□□ 0.77
CLN6-225ENST00000638144 DENND4BO75064 1496 aaPredicted RBP19.86■□□□□ 0.77
CLN6-225ENST00000638144 EFCAB2Q5VUJ9 269 aa19.84■□□□□ 0.77
CLN6-225ENST00000638144 SCAPERQ9BY12 1400 aa19.84■□□□□ 0.77
CLN6-225ENST00000638144 GPATCH8Q9UKJ3 1502 aaKnown RBP19.81■□□□□ 0.76
CLN6-225ENST00000638144 POGZQ7Z3K3 1410 aa19.81■□□□□ 0.76
CLN6-225ENST00000638144 SUPT6HQ7KZ85 1726 aaKnown RBP19.8■□□□□ 0.76
CLN6-225ENST00000638144 CCNB3Q8WWL7 1395 aa19.8■□□□□ 0.76
CLN6-225ENST00000638144 SAMD9LQ8IVG5 1584 aa19.79■□□□□ 0.76
CLN6-225ENST00000638144 ZNF777Q9ULD5 760 aaPredicted RBP19.79■□□□□ 0.76
CLN6-225ENST00000638144 ABCC1P33527 1531 aa19.79■□□□□ 0.76
CLN6-225ENST00000638144 LRRC9Q6ZRR7 1453 aa19.79■□□□□ 0.76
CLN6-225ENST00000638144 ITSN2Q9NZM3 1697 aa19.78■□□□□ 0.76
CLN6-225ENST00000638144 ARHGEF40Q8TER5 1519 aa19.78■□□□□ 0.76
CLN6-225ENST00000638144 NCOA2Q15596 1464 aa19.78■□□□□ 0.76
CLN6-225ENST00000638144 ZMYM4Q5VZL5 1548 aa19.77■□□□□ 0.76
CLN6-225ENST00000638144 ARHGEF12Q9NZN5 1544 aa19.77■□□□□ 0.76
CLN6-225ENST00000638144 KANK4Q5T7N3 995 aaPredicted RBP19.77■□□□□ 0.76
CLN6-225ENST00000638144 YEATS2Q9ULM3 1422 aa19.76■□□□□ 0.75
CLN6-225ENST00000638144 SYCP2Q9BX26 1530 aa19.75■□□□□ 0.75
CLN6-225ENST00000638144 MAP3K1Q13233 1512 aa19.74■□□□□ 0.75
CLN6-225ENST00000638144 ZFYVE16Q7Z3T8 1539 aa19.74■□□□□ 0.75
CLN6-225ENST00000638144 KDM4FA0A1W2PPD8 638 aa19.73■□□□□ 0.75
CLN6-225ENST00000638144 AFAP1Q8N556 730 aa19.73■□□□□ 0.75
CLN6-225ENST00000638144 CFDP1Q9UEE9 299 aaPredicted RBP19.73■□□□□ 0.75
CLN6-225ENST00000638144 TRAPPC8Q9Y2L5 1435 aa19.73■□□□□ 0.75
CLN6-225ENST00000638144 ZNF518AQ6AHZ1 1483 aa19.72■□□□□ 0.75
CLN6-225ENST00000638144 SIGLEC1Q9BZZ2 1709 aa19.71■□□□□ 0.75
CLN6-225ENST00000638144 KDM5CP41229 1560 aa19.71■□□□□ 0.75
CLN6-225ENST00000638144 AEBP2Q6ZN18 517 aaPredicted RBP19.7■□□□□ 0.74
CLN6-225ENST00000638144 ZNF644Q9H582 1327 aaPredicted RBP19.7■□□□□ 0.74
CLN6-225ENST00000638144 APLP2Q06481 763 aa19.69■□□□□ 0.74
CLN6-225ENST00000638144 HECW2Q9P2P5 1572 aa19.69■□□□□ 0.74
CLN6-225ENST00000638144 HNRNPMP52272 730 aaKnown RBP eCLIP19.67■□□□□ 0.74
CLN6-225ENST00000638144 MYT1LQ9UL68 1186 aa19.66■□□□□ 0.74
CLN6-225ENST00000638144 MAGI2Q86UL8 1455 aa19.66■□□□□ 0.74
CLN6-225ENST00000638144 ABCA6Q8N139 1617 aa19.65■□□□□ 0.74
CLN6-225ENST00000638144 ARID4BQ4LE39 1312 aaPredicted RBP19.64■□□□□ 0.73
CLN6-225ENST00000638144 CAMSAP2Q08AD1 1489 aa19.64■□□□□ 0.73
CLN6-225ENST00000638144 DIP2CQ9Y2E4 1556 aa19.64■□□□□ 0.73
CLN6-225ENST00000638144 KIDINS220Q9ULH0 1771 aa19.63■□□□□ 0.73
CLN6-225ENST00000638144 PLEKHH2Q8IVE3 1493 aa19.63■□□□□ 0.73
CLN6-225ENST00000638144 BCORL1Q5H9F3 1711 aa19.62■□□□□ 0.73
CLN6-225ENST00000638144 KIAA1107Q9UPP5 1409 aa19.61■□□□□ 0.73
CLN6-225ENST00000638144 ATP10AO60312 1499 aa19.6■□□□□ 0.73
CLN6-225ENST00000638144 MLH3Q9UHC1 1453 aa19.6■□□□□ 0.73
CLN6-225ENST00000638144 MYOM3Q5VTT5 1437 aa19.59■□□□□ 0.73
CLN6-225ENST00000638144 C9orf84Q5VXU9 1444 aa19.59■□□□□ 0.73
CLN6-225ENST00000638144 MBD5Q9P267 1494 aa19.59■□□□□ 0.73
CLN6-225ENST00000638144 INO80Q9ULG1 1556 aaPredicted RBP19.58■□□□□ 0.73
CLN6-225ENST00000638144 ADAMTSL3P82987 1691 aa19.58■□□□□ 0.72
CLN6-225ENST00000638144 MADDQ8WXG6 1647 aa19.58■□□□□ 0.72
CLN6-225ENST00000638144 SPAG9O60271 1321 aaKnown RBP19.57■□□□□ 0.72
CLN6-225ENST00000638144 ATP7AQ04656 1500 aa19.57■□□□□ 0.72
CLN6-225ENST00000638144 MLECQ14165 292 aa19.56■□□□□ 0.72
CLN6-225ENST00000638144 PPARGC1BQ86YN6 1023 aaKnown RBP19.55■□□□□ 0.72
CLN6-225ENST00000638144 CCDC141Q6ZP82 1450 aa19.54■□□□□ 0.72
CLN6-225ENST00000638144 RIMS1Q86UR5 1692 aaKnown RBP19.53■□□□□ 0.72
CLN6-225ENST00000638144 PTPN23Q9H3S7 1636 aa19.51■□□□□ 0.71
CLN6-225ENST00000638144 ARHGEF5Q12774 1597 aa19.51■□□□□ 0.71
CLN6-225ENST00000638144 MIA2Q96PC5 1412 aa19.51■□□□□ 0.71
CLN6-225ENST00000638144 FER1L4A9Z1Z3 1794 aa19.5■□□□□ 0.71
CLN6-225ENST00000638144 REREQ9P2R6 1566 aa19.5■□□□□ 0.71
CLN6-225ENST00000638144 FGD6Q6ZV73 1430 aa19.5■□□□□ 0.71
CLN6-225ENST00000638144 ADGBQ8N7X0 1667 aa19.49■□□□□ 0.71
CLN6-225ENST00000638144 PTPRMP28827 1452 aa19.47■□□□□ 0.71
CLN6-225ENST00000638144 PLPPR3Q6T4P5 718 aa19.46■□□□□ 0.71
CLN6-225ENST00000638144 PLXNC1O60486 1568 aa19.44■□□□□ 0.7
CLN6-225ENST00000638144 A2MP01023 1474 aa19.44■□□□□ 0.7
CLN6-225ENST00000638144 AGLP35573 1532 aa19.44■□□□□ 0.7
CLN6-225ENST00000638144 CROCC2H7BZ55 1655 aa19.43■□□□□ 0.7
CLN6-225ENST00000638144 TCOF1Q13428 1488 aaKnown RBP19.42■□□□□ 0.7
CLN6-225ENST00000638144 RTEL1-TNFRSF6BF6WH68 1400 aa19.42■□□□□ 0.7
CLN6-225ENST00000638144 DNMT1P26358 1616 aaKnown RBP19.4■□□□□ 0.7
CLN6-225ENST00000638144 MAST1Q9Y2H9 1570 aa19.4■□□□□ 0.7
CLN6-225ENST00000638144 ABCC5O15440 1437 aa19.39■□□□□ 0.69
CLN6-225ENST00000638144 TSPY4P0CV99 314 aa19.38■□□□□ 0.69
CLN6-225ENST00000638144 TSPY10P0CW01 314 aa19.38■□□□□ 0.69
CLN6-225ENST00000638144 FAM50AQ14320 339 aaKnown RBP19.38■□□□□ 0.69
CLN6-225ENST00000638144 RSPH4AQ5TD94 716 aa19.38■□□□□ 0.69
CLN6-225ENST00000638144 DAPK1P53355 1430 aa19.37■□□□□ 0.69
CLN6-225ENST00000638144 SHANK2Q9UPX8 1470 aa19.34■□□□□ 0.69
CLN6-225ENST00000638144 DHX29Q7Z478 1369 aaKnown RBP19.33■□□□□ 0.69
CLN6-225ENST00000638144 CEBPAP49715 358 aaPredicted RBP19.33■□□□□ 0.68
CLN6-225ENST00000638144 CLTCQ00610 1675 aaKnown RBP19.33■□□□□ 0.68
CLN6-225ENST00000638144 GGT6Q6P531 493 aa19.32■□□□□ 0.68
CLN6-225ENST00000638144 CHIC2Q9UKJ5 165 aa19.32■□□□□ 0.68
CLN6-225ENST00000638144 C3P01024 1663 aa19.32■□□□□ 0.68
CLN6-225ENST00000638144 KIF3BO15066 747 aa19.3■□□□□ 0.68
CLN6-225ENST00000638144 ESF1Q9H501 851 aaKnown RBP19.3■□□□□ 0.68
CLN6-225ENST00000638144 RRP7BPQ9NSQ0 103 aa19.28■□□□□ 0.68
CLN6-225ENST00000638144 KIF15Q9NS87 1388 aa19.28■□□□□ 0.68
CLN6-225ENST00000638144 MROH2AA6NES4 1674 aa19.26■□□□□ 0.67
CLN6-225ENST00000638144 DUOX2Q9NRD8 1548 aa19.25■□□□□ 0.67
CLN6-225ENST00000638144 PTPRKQ15262 1439 aa19.25■□□□□ 0.67
CLN6-225ENST00000638144 RNF17Q9BXT8 1623 aaKnown RBP19.24■□□□□ 0.67
CLN6-225ENST00000638144 EIF2AK4Q9P2K8 1649 aaKnown RBP19.24■□□□□ 0.67
CLN6-225ENST00000638144 CNTLNQ9NXG0 1405 aa19.24■□□□□ 0.67
CLN6-225ENST00000638144 ITGAEP38570 1179 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 113.3 ms