RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 ZMYM4Q5VZL5 1548 aa30.49■■■□□ 2.47
CLN6-221ENST00000637494 MAGI2Q86UL8 1455 aa30.48■■■□□ 2.47
CLN6-221ENST00000637494 POGZQ7Z3K3 1410 aa30.47■■■□□ 2.47
CLN6-221ENST00000637494 ZFYVE16Q7Z3T8 1539 aa30.46■■■□□ 2.47
CLN6-221ENST00000637494 CEP162Q5TB80 1403 aa30.4■■■□□ 2.46
CLN6-221ENST00000637494 BCORL1Q5H9F3 1711 aa30.39■■■□□ 2.46
CLN6-221ENST00000637494 ADAMTSL3P82987 1691 aa30.39■■■□□ 2.45
CLN6-221ENST00000637494 ZNF518AQ6AHZ1 1483 aa30.38■■■□□ 2.45
CLN6-221ENST00000637494 PREX2Q70Z35 1606 aa30.37■■■□□ 2.45
CLN6-221ENST00000637494 YEATS2Q9ULM3 1422 aa30.37■■■□□ 2.45
CLN6-221ENST00000637494 CDC42BPBQ9Y5S2 1711 aa30.36■■■□□ 2.45
CLN6-221ENST00000637494 MYT1LQ9UL68 1186 aa30.35■■■□□ 2.45
CLN6-221ENST00000637494 PTPRMP28827 1452 aa30.32■■■□□ 2.44
CLN6-221ENST00000637494 MTUS2Q5JR59 1369 aa30.31■■■□□ 2.44
CLN6-221ENST00000637494 ATP10AO60312 1499 aa30.3■■■□□ 2.44
CLN6-221ENST00000637494 HECW2Q9P2P5 1572 aa30.29■■■□□ 2.44
CLN6-221ENST00000637494 AFAP1Q8N556 730 aa30.29■■■□□ 2.44
CLN6-221ENST00000637494 MADDQ8WXG6 1647 aa30.29■■■□□ 2.44
CLN6-221ENST00000637494 CDC42BPAQ5VT25 1732 aa30.27■■■□□ 2.44
CLN6-221ENST00000637494 C9orf84Q5VXU9 1444 aa30.27■■■□□ 2.44
CLN6-221ENST00000637494 KDM5CP41229 1560 aa30.26■■■□□ 2.43
CLN6-221ENST00000637494 ZNF777Q9ULD5 760 aaPredicted RBP30.25■■■□□ 2.43
CLN6-221ENST00000637494 ABCC1P33527 1531 aa30.25■■■□□ 2.43
CLN6-221ENST00000637494 MLECQ14165 292 aa30.23■■■□□ 2.43
CLN6-221ENST00000637494 CCNB3Q8WWL7 1395 aa30.23■■■□□ 2.43
CLN6-221ENST00000637494 RIMS1Q86UR5 1692 aaKnown RBP30.21■■■□□ 2.43
CLN6-221ENST00000637494 ITSN2Q9NZM3 1697 aa30.21■■■□□ 2.43
CLN6-221ENST00000637494 LOC105371045A0A1W2PR82 267 aa30.21■■■□□ 2.43
CLN6-221ENST00000637494 GPATCH8Q9UKJ3 1502 aaKnown RBP30.21■■■□□ 2.43
CLN6-221ENST00000637494 CFDP1Q9UEE9 299 aaPredicted RBP30.19■■■□□ 2.42
CLN6-221ENST00000637494 MLH3Q9UHC1 1453 aa30.19■■■□□ 2.42
CLN6-221ENST00000637494 EHBP1L1Q8N3D4 1523 aa30.18■■■□□ 2.42
CLN6-221ENST00000637494 TRAPPC8Q9Y2L5 1435 aa30.18■■■□□ 2.42
CLN6-221ENST00000637494 SIGLEC1Q9BZZ2 1709 aa30.17■■■□□ 2.42
CLN6-221ENST00000637494 ARHGEF12Q9NZN5 1544 aa30.17■■■□□ 2.42
CLN6-221ENST00000637494 PLEKHH2Q8IVE3 1493 aa30.14■■■□□ 2.42
CLN6-221ENST00000637494 SAMD9LQ8IVG5 1584 aa30.13■■■□□ 2.41
CLN6-221ENST00000637494 DIP2CQ9Y2E4 1556 aa30.13■■■□□ 2.41
CLN6-221ENST00000637494 FER1L4A9Z1Z3 1794 aa30.12■■■□□ 2.41
CLN6-221ENST00000637494 PLPPR3Q6T4P5 718 aa30.11■■■□□ 2.41
CLN6-221ENST00000637494 SYCP2Q9BX26 1530 aa30.11■■■□□ 2.41
CLN6-221ENST00000637494 ABCA6Q8N139 1617 aa30.09■■■□□ 2.41
CLN6-221ENST00000637494 REREQ9P2R6 1566 aa30.09■■■□□ 2.41
CLN6-221ENST00000637494 VPS8Q8N3P4 1428 aa30.08■■■□□ 2.41
CLN6-221ENST00000637494 KIAA1107Q9UPP5 1409 aa30.08■■■□□ 2.41
CLN6-221ENST00000637494 HNRNPMP52272 730 aaKnown RBP eCLIP30.08■■■□□ 2.41
CLN6-221ENST00000637494 SPAG9O60271 1321 aaKnown RBP30.06■■■□□ 2.4
CLN6-221ENST00000637494 TIAM1Q13009 1591 aa30.04■■■□□ 2.4
CLN6-221ENST00000637494 KIDINS220Q9ULH0 1771 aa30.03■■■□□ 2.4
CLN6-221ENST00000637494 SUPT6HQ7KZ85 1726 aaKnown RBP30.02■■■□□ 2.4
CLN6-221ENST00000637494 ESF1Q9H501 851 aaKnown RBP30.02■■■□□ 2.4
CLN6-221ENST00000637494 AGLP35573 1532 aa30■■■□□ 2.39
CLN6-221ENST00000637494 NCOA2Q15596 1464 aa29.97■■■□□ 2.39
CLN6-221ENST00000637494 ATP7AQ04656 1500 aa29.96■■■□□ 2.39
CLN6-221ENST00000637494 LMTK3Q96Q04 1460 aa29.95■■■□□ 2.39
CLN6-221ENST00000637494 ZNF644Q9H582 1327 aaPredicted RBP29.93■■■□□ 2.38
CLN6-221ENST00000637494 LRRC9Q6ZRR7 1453 aa29.91■■■□□ 2.38
CLN6-221ENST00000637494 INO80Q9ULG1 1556 aaPredicted RBP29.9■■■□□ 2.38
CLN6-221ENST00000637494 MAP3K1Q13233 1512 aa29.88■■■□□ 2.37
CLN6-221ENST00000637494 CEBPAP49715 358 aaPredicted RBP29.88■■■□□ 2.37
CLN6-221ENST00000637494 APLP2Q06481 763 aa29.88■■■□□ 2.37
CLN6-221ENST00000637494 RSPH4AQ5TD94 716 aa29.86■■■□□ 2.37
CLN6-221ENST00000637494 CNTLNQ9NXG0 1405 aa29.86■■■□□ 2.37
CLN6-221ENST00000637494 A2MP01023 1474 aa29.86■■■□□ 2.37
CLN6-221ENST00000637494 MBD5Q9P267 1494 aa29.86■■■□□ 2.37
CLN6-221ENST00000637494 CAMSAP2Q08AD1 1489 aa29.84■■■□□ 2.37
CLN6-221ENST00000637494 PREX1Q8TCU6 1659 aa29.82■■■□□ 2.36
CLN6-221ENST00000637494 RTEL1-TNFRSF6BF6WH68 1400 aa29.82■■■□□ 2.36
CLN6-221ENST00000637494 HSPA2P54652 639 aa29.82■■■□□ 2.36
CLN6-221ENST00000637494 ADGBQ8N7X0 1667 aa29.82■■■□□ 2.36
CLN6-221ENST00000637494 CCDC141Q6ZP82 1450 aa29.8■■■□□ 2.36
CLN6-221ENST00000637494 PLXNC1O60486 1568 aa29.78■■■□□ 2.36
CLN6-221ENST00000637494 C3P01024 1663 aa29.77■■■□□ 2.36
CLN6-221ENST00000637494 KANK4Q5T7N3 995 aaPredicted RBP29.77■■■□□ 2.36
CLN6-221ENST00000637494 UHRF1BP1Q6BDS2 1440 aa29.77■■■□□ 2.36
CLN6-221ENST00000637494 TSPY4P0CV99 314 aa29.75■■■□□ 2.35
CLN6-221ENST00000637494 TSPY10P0CW01 314 aa29.75■■■□□ 2.35
CLN6-221ENST00000637494 GGT6Q6P531 493 aa29.74■■■□□ 2.35
CLN6-221ENST00000637494 SETD1BQ9UPS6 1966 aaKnown RBP29.72■■■□□ 2.35
CLN6-221ENST00000637494 ARHGEF5Q12774 1597 aa29.72■■■□□ 2.35
CLN6-221ENST00000637494 MROH2AA6NES4 1674 aa29.72■■■□□ 2.35
CLN6-221ENST00000637494 PPP6R1Q9UPN7 881 aa29.71■■■□□ 2.35
CLN6-221ENST00000637494 DHX29Q7Z478 1369 aaKnown RBP29.7■■■□□ 2.35
CLN6-221ENST00000637494 MYOM3Q5VTT5 1437 aa29.7■■■□□ 2.34
CLN6-221ENST00000637494 MIA2Q96PC5 1412 aa29.69■■■□□ 2.34
CLN6-221ENST00000637494 ILDR1Q86SU0 546 aaPredicted RBP29.68■■■□□ 2.34
CLN6-221ENST00000637494 ZMYM3Q14202 1370 aa29.67■■■□□ 2.34
CLN6-221ENST00000637494 CLTCQ00610 1675 aaKnown RBP29.65■■■□□ 2.34
CLN6-221ENST00000637494 NPATQ14207 1427 aa29.63■■■□□ 2.33
CLN6-221ENST00000637494 KIF3BO15066 747 aa29.62■■■□□ 2.33
CLN6-221ENST00000637494 DMRT2Q9Y5R5 561 aa29.61■■■□□ 2.33
CLN6-221ENST00000637494 MAST1Q9Y2H9 1570 aa29.56■■■□□ 2.32
CLN6-221ENST00000637494 FAM135AQ9P2D6 1515 aa29.52■■■□□ 2.32
CLN6-221ENST00000637494 WASHC2CQ9Y4E1 1318 aa29.5■■■□□ 2.31
CLN6-221ENST00000637494 FBXO41Q8TF61 875 aa29.5■■■□□ 2.31
CLN6-221ENST00000637494 PTPRKQ15262 1439 aa29.5■■■□□ 2.31
CLN6-221ENST00000637494 KDM5DQ9BY66 1539 aa29.5■■■□□ 2.31
CLN6-221ENST00000637494 PTPN23Q9H3S7 1636 aa29.49■■■□□ 2.31
CLN6-221ENST00000637494 STRCQ7RTU9 1775 aa29.47■■■□□ 2.31
CLN6-221ENST00000637494 FGD6Q6ZV73 1430 aa29.45■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms