RNA–Protein interactions for RNA: ENST00000636940.1

ARID1B-221, Transcript of AT-rich interaction domain 1B, humanhuman

TSL 5

Gene ARID1B, Length 5,910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID1B-221ENST00000636940 PLCB2Q00722 1185 aa13.07□□□□□ -0.32
ARID1B-221ENST00000636940 DCAF11Q8TEB1 546 aa13.07□□□□□ -0.32
ARID1B-221ENST00000636940 FRAT2O75474 233 aaPredicted RBP13.07□□□□□ -0.32
ARID1B-221ENST00000636940 CYB5RLQ6IPT4 315 aa13.07□□□□□ -0.32
ARID1B-221ENST00000636940 CWC22Q9HCG8 908 aaKnown RBP13.07□□□□□ -0.32
ARID1B-221ENST00000636940 CHMP3Q9Y3E7 222 aa13.07□□□□□ -0.32
ARID1B-221ENST00000636940 FHAD1B1AJZ9 1412 aa13.07□□□□□ -0.32
ARID1B-221ENST00000636940 CCDC88BA6NC98 1476 aa13.06□□□□□ -0.32
ARID1B-221ENST00000636940 GOLGA6L22H0YM25 854 aa13.06□□□□□ -0.32
ARID1B-221ENST00000636940 PTMAP06454 111 aaKnown RBP13.06□□□□□ -0.32
ARID1B-221ENST00000636940 TAF7LQ5H9L4 462 aa13.06□□□□□ -0.32
ARID1B-221ENST00000636940 MROH2BQ7Z745 1585 aa13.06□□□□□ -0.32
ARID1B-221ENST00000636940 GNL2Q13823 731 aaKnown RBP13.06□□□□□ -0.32
ARID1B-221ENST00000636940 TRIM44Q96DX7 344 aaPredicted RBP13.06□□□□□ -0.32
ARID1B-221ENST00000636940 VPS53Q5VIR6 699 aa13.05□□□□□ -0.32
ARID1B-221ENST00000636940 OSCARQ8IYS5 282 aa13.05□□□□□ -0.32
ARID1B-221ENST00000636940 MYO15BQ96JP2 1530 aa13.05□□□□□ -0.32
ARID1B-221ENST00000636940 ANO8Q9HCE9 1232 aaPredicted RBP13.05□□□□□ -0.32
ARID1B-221ENST00000636940 EID1Q9Y6B2 187 aa13.05□□□□□ -0.32
ARID1B-221ENST00000636940 CADPSQ9ULU8 1353 aa13.04□□□□□ -0.32
ARID1B-221ENST00000636940 SUPT16HQ9Y5B9 1047 aaKnown RBP13.04□□□□□ -0.32
ARID1B-221ENST00000636940 EVA1CP58658 441 aa13.04□□□□□ -0.32
ARID1B-221ENST00000636940 RGS3P49796 1198 aa13.03□□□□□ -0.32
ARID1B-221ENST00000636940 GORABQ5T7V8 394 aa13.03□□□□□ -0.32
ARID1B-221ENST00000636940 FOXD1Q16676 465 aa13.02□□□□□ -0.32
ARID1B-221ENST00000636940 PPP1R1BQ9UD71 204 aaPredicted RBP13.01□□□□□ -0.33
ARID1B-221ENST00000636940 EFCAB2Q5VUJ9 269 aa13.01□□□□□ -0.33
ARID1B-221ENST00000636940 NUTM2FA1L443 756 aa13□□□□□ -0.33
ARID1B-221ENST00000636940 PNNQ9H307 717 aaKnown RBP12.99□□□□□ -0.33
ARID1B-221ENST00000636940 TNIKQ9UKE5 1360 aa12.99□□□□□ -0.33
ARID1B-221ENST00000636940 BECN1Q14457 450 aa12.99□□□□□ -0.33
ARID1B-221ENST00000636940 NUTM2DQ5VT03 806 aaPredicted RBP12.99□□□□□ -0.33
ARID1B-221ENST00000636940 WWC1Q8IX03 1113 aa12.99□□□□□ -0.33
ARID1B-221ENST00000636940 CTDP1Q9Y5B0 961 aaPredicted RBP12.98□□□□□ -0.33
ARID1B-221ENST00000636940 GOLGA6L4A6NEF3 574 aa12.97□□□□□ -0.33
ARID1B-221ENST00000636940 NGDNQ8NEJ9 315 aaKnown RBP12.97□□□□□ -0.33
ARID1B-221ENST00000636940 LTV1Q96GA3 475 aaPredicted RBP12.97□□□□□ -0.33
ARID1B-221ENST00000636940 DNTTIP2Q5QJE6 756 aaKnown RBP12.97□□□□□ -0.33
ARID1B-221ENST00000636940 RAD21O60216 631 aa12.97□□□□□ -0.33
ARID1B-221ENST00000636940 APBB1O00213 710 aa12.97□□□□□ -0.33
ARID1B-221ENST00000636940 TOP2AP11388 1531 aaKnown RBP12.96□□□□□ -0.33
ARID1B-221ENST00000636940 ABCC8Q09428 1581 aa12.96□□□□□ -0.33
ARID1B-221ENST00000636940 FBXW7Q969H0 707 aa12.96□□□□□ -0.33
ARID1B-221ENST00000636940 FANCD2Q9BXW9 1451 aa12.96□□□□□ -0.34
ARID1B-221ENST00000636940 GOLGA6L6A8MZA4 724 aa12.95□□□□□ -0.34
ARID1B-221ENST00000636940 SF3B2Q13435 895 aaKnown RBP12.95□□□□□ -0.34
ARID1B-221ENST00000636940 HDGFL2Q7Z4V5 671 aaPredicted RBP12.95□□□□□ -0.34
ARID1B-221ENST00000636940 ANP32EQ9BTT0 268 aa12.95□□□□□ -0.34
ARID1B-221ENST00000636940 WIZO95785 1651 aa12.95□□□□□ -0.34
ARID1B-221ENST00000636940 SYTL4Q96C24 671 aaPredicted RBP12.95□□□□□ -0.34
ARID1B-221ENST00000636940 TMF1P82094 1093 aa12.95□□□□□ -0.34
ARID1B-221ENST00000636940 MORC1Q86VD1 984 aa12.94□□□□□ -0.34
ARID1B-221ENST00000636940 ATAD2BQ9ULI0 1458 aa12.93□□□□□ -0.34
ARID1B-221ENST00000636940 TRIM34Q9BYJ4 488 aa12.93□□□□□ -0.34
ARID1B-221ENST00000636940 MARCH6O60337 910 aa12.93□□□□□ -0.34
ARID1B-221ENST00000636940 FBXO3Q9UK99 471 aa12.92□□□□□ -0.34
ARID1B-221ENST00000636940 TOMM22Q9NS69 142 aa12.92□□□□□ -0.34
ARID1B-221ENST00000636940 JPH4Q96JJ6 628 aa12.92□□□□□ -0.34
ARID1B-221ENST00000636940 CHMP4BQ9H444 224 aaKnown RBP12.92□□□□□ -0.34
ARID1B-221ENST00000636940 KIAA2012Q0VF49 1180 aa12.92□□□□□ -0.34
ARID1B-221ENST00000636940 DDRGK1Q96HY6 314 aa12.91□□□□□ -0.34
ARID1B-221ENST00000636940 ARHGAP35Q9NRY4 1499 aa12.91□□□□□ -0.34
ARID1B-221ENST00000636940 PKD2Q13563 968 aa12.9□□□□□ -0.34
ARID1B-221ENST00000636940 RASSF8Q8NHQ8 419 aa12.9□□□□□ -0.34
ARID1B-221ENST00000636940 KIF3BO15066 747 aa12.9□□□□□ -0.34
ARID1B-221ENST00000636940 TCEAL9Q9UHQ7 104 aa12.89□□□□□ -0.35
ARID1B-221ENST00000636940 NRDCO43847 1150 aa12.89□□□□□ -0.35
ARID1B-221ENST00000636940 SMARCA4P51532 1647 aa12.89□□□□□ -0.35
ARID1B-221ENST00000636940 CHAF1AQ13111 956 aaPredicted RBP12.89□□□□□ -0.35
ARID1B-221ENST00000636940 SAMD1Q6SPF0 538 aaPredicted RBP12.89□□□□□ -0.35
ARID1B-221ENST00000636940 FMN1Q68DA7 1419 aa12.88□□□□□ -0.35
ARID1B-221ENST00000636940 SPRYD3Q8NCJ5 442 aa12.88□□□□□ -0.35
ARID1B-221ENST00000636940 NOC3LQ8WTT2 800 aaKnown RBP12.88□□□□□ -0.35
ARID1B-221ENST00000636940 WASHC2CQ9Y4E1 1318 aa12.88□□□□□ -0.35
ARID1B-221ENST00000636940 SPAG9O60271 1321 aaKnown RBP12.88□□□□□ -0.35
ARID1B-221ENST00000636940 ERICH6BQ5W0A0 696 aa12.87□□□□□ -0.35
ARID1B-221ENST00000636940 AMPHP49418 695 aa12.87□□□□□ -0.35
ARID1B-221ENST00000636940 B4GALNT3Q6L9W6 998 aa12.87□□□□□ -0.35
ARID1B-221ENST00000636940 HNRNPMP52272 730 aaKnown RBP eCLIP12.86□□□□□ -0.35
ARID1B-221ENST00000636940 FAM69CQ0P6D2 419 aa12.86□□□□□ -0.35
ARID1B-221ENST00000636940 HSP90AB1P08238 724 aaKnown RBP12.85□□□□□ -0.35
ARID1B-221ENST00000636940 KIAA1211Q6ZU35 1233 aa12.85□□□□□ -0.35
ARID1B-221ENST00000636940 MCCP23508 829 aa12.84□□□□□ -0.35
ARID1B-221ENST00000636940 RAPGEF2Q9Y4G8 1499 aa12.84□□□□□ -0.35
ARID1B-221ENST00000636940 PTPRGP23470 1445 aa12.84□□□□□ -0.35
ARID1B-221ENST00000636940 KANK4Q5T7N3 995 aaPredicted RBP12.84□□□□□ -0.35
ARID1B-221ENST00000636940 HSPA5P11021 654 aaKnown RBP12.83□□□□□ -0.35
ARID1B-221ENST00000636940 ANKRD30AQ9BXX3 1397 aa12.82□□□□□ -0.36
ARID1B-221ENST00000636940 MS4A1P11836 297 aa12.82□□□□□ -0.36
ARID1B-221ENST00000636940 CREBRFQ8IUR6 639 aa12.82□□□□□ -0.36
ARID1B-221ENST00000636940 U2AF1L5P0DN76 240 aaPredicted RBP12.82□□□□□ -0.36
ARID1B-221ENST00000636940 U2AF1Q01081 240 aaKnown RBP eCLIP12.82□□□□□ -0.361e-8■□□□□ 11
ARID1B-221ENST00000636940 CEP89Q96ST8 783 aa12.81□□□□□ -0.36
ARID1B-221ENST00000636940 L1TD1Q5T7N2 865 aaKnown RBP12.81□□□□□ -0.36
ARID1B-221ENST00000636940 NOL10Q9BSC4 688 aaKnown RBP12.81□□□□□ -0.36
ARID1B-221ENST00000636940 STK31Q9BXU1 1019 aa12.81□□□□□ -0.36
ARID1B-221ENST00000636940 CCAR1Q8IX12 1150 aaKnown RBP12.8□□□□□ -0.36
ARID1B-221ENST00000636940 FHOD3Q2V2M9 1422 aa12.8□□□□□ -0.36
ARID1B-221ENST00000636940 HSP90B1P14625 803 aaKnown RBP12.8□□□□□ -0.36
ARID1B-221ENST00000636940 CCDC18Q5T9S5 1454 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 163 ms