RNA–Protein interactions for RNA: ENST00000636500.1

SMIM29-209, Transcript of small integral membrane protein 29, humanhuman

TSL 1 (best) BASIC

Gene SMIM29, Length 1,186 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM29-209ENST00000636500 VPS8Q8N3P4 1428 aa29.52■■■□□ 2.32
SMIM29-209ENST00000636500 EFCAB2Q5VUJ9 269 aa29.51■■■□□ 2.31
SMIM29-209ENST00000636500 AEBP2Q6ZN18 517 aaPredicted RBP29.5■■■□□ 2.31
SMIM29-209ENST00000636500 SCAPERQ9BY12 1400 aa29.49■■■□□ 2.31
SMIM29-209ENST00000636500 ZMYM4Q5VZL5 1548 aa29.49■■■□□ 2.31
SMIM29-209ENST00000636500 POGZQ7Z3K3 1410 aa29.46■■■□□ 2.31
SMIM29-209ENST00000636500 EHBP1L1Q8N3D4 1523 aa29.45■■■□□ 2.31
SMIM29-209ENST00000636500 ARHGEF40Q8TER5 1519 aa29.45■■■□□ 2.31
SMIM29-209ENST00000636500 MTUS2Q5JR59 1369 aa29.45■■■□□ 2.31
SMIM29-209ENST00000636500 TIAM1Q13009 1591 aa29.44■■■□□ 2.3
SMIM29-209ENST00000636500 GPATCH8Q9UKJ3 1502 aaKnown RBP29.43■■■□□ 2.3
SMIM29-209ENST00000636500 ABCC1P33527 1531 aa29.4■■■□□ 2.3
SMIM29-209ENST00000636500 ITSN2Q9NZM3 1697 aa29.4■■■□□ 2.3
SMIM29-209ENST00000636500 ARHGEF12Q9NZN5 1544 aa29.38■■■□□ 2.29
SMIM29-209ENST00000636500 ZFYVE16Q7Z3T8 1539 aa29.37■■■□□ 2.29
SMIM29-209ENST00000636500 SAMD9LQ8IVG5 1584 aa29.37■■■□□ 2.29
SMIM29-209ENST00000636500 SIGLEC1Q9BZZ2 1709 aa29.37■■■□□ 2.29
SMIM29-209ENST00000636500 YEATS2Q9ULM3 1422 aa29.37■■■□□ 2.29
SMIM29-209ENST00000636500 KDM5CP41229 1560 aa29.36■■■□□ 2.29
SMIM29-209ENST00000636500 MAGI2Q86UL8 1455 aa29.36■■■□□ 2.29
SMIM29-209ENST00000636500 ZNF518AQ6AHZ1 1483 aa29.34■■■□□ 2.29
SMIM29-209ENST00000636500 SUPT6HQ7KZ85 1726 aaKnown RBP29.33■■■□□ 2.29
SMIM29-209ENST00000636500 CCNB3Q8WWL7 1395 aa29.32■■■□□ 2.28
SMIM29-209ENST00000636500 MAP3K1Q13233 1512 aa29.3■■■□□ 2.28
SMIM29-209ENST00000636500 TRAPPC8Q9Y2L5 1435 aa29.3■■■□□ 2.28
SMIM29-209ENST00000636500 AFAP1Q8N556 730 aa29.3■■■□□ 2.28
SMIM29-209ENST00000636500 BCORL1Q5H9F3 1711 aa29.29■■■□□ 2.28
SMIM29-209ENST00000636500 ADAMTSL3P82987 1691 aa29.29■■■□□ 2.28
SMIM29-209ENST00000636500 LRRC9Q6ZRR7 1453 aa29.29■■■□□ 2.28
SMIM29-209ENST00000636500 NCOA2Q15596 1464 aa29.28■■■□□ 2.28
SMIM29-209ENST00000636500 HECW2Q9P2P5 1572 aa29.27■■■□□ 2.28
SMIM29-209ENST00000636500 SYCP2Q9BX26 1530 aa29.26■■■□□ 2.27
SMIM29-209ENST00000636500 ZNF777Q9ULD5 760 aaPredicted RBP29.25■■■□□ 2.27
SMIM29-209ENST00000636500 CFDP1Q9UEE9 299 aaPredicted RBP29.24■■■□□ 2.27
SMIM29-209ENST00000636500 KANK4Q5T7N3 995 aaPredicted RBP29.22■■■□□ 2.27
SMIM29-209ENST00000636500 ABCA6Q8N139 1617 aa29.22■■■□□ 2.27
SMIM29-209ENST00000636500 MLH3Q9UHC1 1453 aa29.22■■■□□ 2.27
SMIM29-209ENST00000636500 DIP2CQ9Y2E4 1556 aa29.22■■■□□ 2.27
SMIM29-209ENST00000636500 KIDINS220Q9ULH0 1771 aa29.21■■■□□ 2.27
SMIM29-209ENST00000636500 ATP10AO60312 1499 aa29.21■■■□□ 2.27
SMIM29-209ENST00000636500 KIAA1107Q9UPP5 1409 aa29.2■■■□□ 2.26
SMIM29-209ENST00000636500 PLEKHH2Q8IVE3 1493 aa29.18■■■□□ 2.26
SMIM29-209ENST00000636500 ARID4BQ4LE39 1312 aaPredicted RBP29.18■■■□□ 2.26
SMIM29-209ENST00000636500 MADDQ8WXG6 1647 aa29.17■■■□□ 2.26
SMIM29-209ENST00000636500 HNRNPMP52272 730 aaKnown RBP eCLIP29.17■■■□□ 2.26
SMIM29-209ENST00000636500 C9orf84Q5VXU9 1444 aa29.17■■■□□ 2.26
SMIM29-209ENST00000636500 ZNF644Q9H582 1327 aaPredicted RBP29.17■■■□□ 2.26
SMIM29-209ENST00000636500 REREQ9P2R6 1566 aa29.13■■■□□ 2.25
SMIM29-209ENST00000636500 MBD5Q9P267 1494 aa29.11■■■□□ 2.25
SMIM29-209ENST00000636500 INO80Q9ULG1 1556 aaPredicted RBP29.1■■■□□ 2.25
SMIM29-209ENST00000636500 RIMS1Q86UR5 1692 aaKnown RBP29.09■■■□□ 2.25
SMIM29-209ENST00000636500 CAMSAP2Q08AD1 1489 aa29.09■■■□□ 2.25
SMIM29-209ENST00000636500 MYT1LQ9UL68 1186 aa29.08■■■□□ 2.25
SMIM29-209ENST00000636500 PTPRMP28827 1452 aa29.07■■■□□ 2.24
SMIM29-209ENST00000636500 ATP7AQ04656 1500 aa29.06■■■□□ 2.24
SMIM29-209ENST00000636500 FER1L4A9Z1Z3 1794 aa29.06■■■□□ 2.24
SMIM29-209ENST00000636500 SPAG9O60271 1321 aaKnown RBP29.04■■■□□ 2.24
SMIM29-209ENST00000636500 APLP2Q06481 763 aa29.02■■■□□ 2.24
SMIM29-209ENST00000636500 MLECQ14165 292 aa29.01■■■□□ 2.23
SMIM29-209ENST00000636500 AGLP35573 1532 aa29■■■□□ 2.23
SMIM29-209ENST00000636500 MYOM3Q5VTT5 1437 aa29■■■□□ 2.23
SMIM29-209ENST00000636500 ARHGEF5Q12774 1597 aa28.98■■■□□ 2.23
SMIM29-209ENST00000636500 CCDC141Q6ZP82 1450 aa28.97■■■□□ 2.23
SMIM29-209ENST00000636500 ADGBQ8N7X0 1667 aa28.96■■■□□ 2.23
SMIM29-209ENST00000636500 MIA2Q96PC5 1412 aa28.95■■■□□ 2.23
SMIM29-209ENST00000636500 PLXNC1O60486 1568 aa28.95■■■□□ 2.22
SMIM29-209ENST00000636500 RTEL1-TNFRSF6BF6WH68 1400 aa28.92■■■□□ 2.22
SMIM29-209ENST00000636500 A2MP01023 1474 aa28.9■■■□□ 2.22
SMIM29-209ENST00000636500 PTPN23Q9H3S7 1636 aa28.87■■■□□ 2.21
SMIM29-209ENST00000636500 RSPH4AQ5TD94 716 aa28.87■■■□□ 2.21
SMIM29-209ENST00000636500 MAST1Q9Y2H9 1570 aa28.84■■■□□ 2.21
SMIM29-209ENST00000636500 FGD6Q6ZV73 1430 aa28.83■■■□□ 2.21
SMIM29-209ENST00000636500 CROCC2H7BZ55 1655 aa28.8■■■□□ 2.2
SMIM29-209ENST00000636500 C3P01024 1663 aa28.8■■■□□ 2.2
SMIM29-209ENST00000636500 TCOF1Q13428 1488 aaKnown RBP28.79■■■□□ 2.2
SMIM29-209ENST00000636500 PLPPR3Q6T4P5 718 aa28.78■■■□□ 2.2
SMIM29-209ENST00000636500 DHX29Q7Z478 1369 aaKnown RBP28.77■■■□□ 2.2
SMIM29-209ENST00000636500 TSPY4P0CV99 314 aa28.76■■■□□ 2.19
SMIM29-209ENST00000636500 TSPY10P0CW01 314 aa28.76■■■□□ 2.19
SMIM29-209ENST00000636500 CEBPAP49715 358 aaPredicted RBP28.75■■■□□ 2.19
SMIM29-209ENST00000636500 DNMT1P26358 1616 aaKnown RBP28.75■■■□□ 2.19
SMIM29-209ENST00000636500 MROH2AA6NES4 1674 aa28.74■■■□□ 2.19
SMIM29-209ENST00000636500 LMTK3Q96Q04 1460 aa28.74■■■□□ 2.19
SMIM29-209ENST00000636500 CLTCQ00610 1675 aaKnown RBP28.74■■■□□ 2.19
SMIM29-209ENST00000636500 ABCC5O15440 1437 aa28.73■■■□□ 2.19
SMIM29-209ENST00000636500 CNTLNQ9NXG0 1405 aa28.69■■■□□ 2.18
SMIM29-209ENST00000636500 SHANK2Q9UPX8 1470 aa28.69■■■□□ 2.18
SMIM29-209ENST00000636500 DAPK1P53355 1430 aa28.69■■■□□ 2.18
SMIM29-209ENST00000636500 SETD1BQ9UPS6 1966 aaKnown RBP28.68■■■□□ 2.18
SMIM29-209ENST00000636500 PREX1Q8TCU6 1659 aa28.68■■■□□ 2.18
SMIM29-209ENST00000636500 GGT6Q6P531 493 aa28.66■■■□□ 2.18
SMIM29-209ENST00000636500 ESF1Q9H501 851 aaKnown RBP28.65■■■□□ 2.18
SMIM29-209ENST00000636500 KIF3BO15066 747 aa28.62■■■□□ 2.17
SMIM29-209ENST00000636500 PPARGC1BQ86YN6 1023 aaKnown RBP28.62■■■□□ 2.17
SMIM29-209ENST00000636500 RNF17Q9BXT8 1623 aaKnown RBP28.61■■■□□ 2.17
SMIM29-209ENST00000636500 EIF2AK4Q9P2K8 1649 aaKnown RBP28.61■■■□□ 2.17
SMIM29-209ENST00000636500 ZMYM3Q14202 1370 aa28.61■■■□□ 2.17
SMIM29-209ENST00000636500 DUOX2Q9NRD8 1548 aa28.59■■■□□ 2.17
SMIM29-209ENST00000636500 PPP6R1Q9UPN7 881 aa28.59■■■□□ 2.17
SMIM29-209ENST00000636500 MROH1Q8NDA8 1641 aa28.56■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms