RNA–Protein interactions for RNA: ENST00000636257.1

SPTAN1-230, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 5

Gene SPTAN1, Length 100 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-230ENST00000636257 FAM9AQ8IZU1 332 aaPredicted RBP21.9■■□□□ 1.1
SPTAN1-230ENST00000636257 RAPGEF6Q8TEU7 1601 aa21.89■■□□□ 1.09
SPTAN1-230ENST00000636257 CEBPAP49715 358 aaPredicted RBP21.88■■□□□ 1.09
SPTAN1-230ENST00000636257 MED1Q15648 1581 aaPredicted RBP21.84■■□□□ 1.09
SPTAN1-230ENST00000636257 ATP10AO60312 1499 aa21.83■■□□□ 1.08
SPTAN1-230ENST00000636257 C9orf84Q5VXU9 1444 aa21.81■■□□□ 1.08
SPTAN1-230ENST00000636257 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.8■■□□□ 1.08
SPTAN1-230ENST00000636257 C3P01024 1663 aa21.79■■□□□ 1.08
SPTAN1-230ENST00000636257 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.79■■□□□ 1.08
SPTAN1-230ENST00000636257 HNRNPUL2Q1KMD3 747 aaKnown RBP21.79■■□□□ 1.08
SPTAN1-230ENST00000636257 NCOA1Q15788 1441 aa21.78■■□□□ 1.08
SPTAN1-230ENST00000636257 NUP153P49790 1475 aaKnown RBP21.77■■□□□ 1.08
SPTAN1-230ENST00000636257 UBAP1LF5GYI3 381 aa21.77■■□□□ 1.08
SPTAN1-230ENST00000636257 SAMD9Q5K651 1589 aa21.77■■□□□ 1.08
SPTAN1-230ENST00000636257 P3H3Q8IVL6 736 aa21.76■■□□□ 1.07
SPTAN1-230ENST00000636257 SCAPERQ9BY12 1400 aa21.72■■□□□ 1.07
SPTAN1-230ENST00000636257 PRXQ9BXM0 1461 aa21.7■■□□□ 1.06
SPTAN1-230ENST00000636257 PLEKHD1A6NEE1 506 aa21.69■■□□□ 1.06
SPTAN1-230ENST00000636257 TRAPPC8Q9Y2L5 1435 aa21.68■■□□□ 1.06
SPTAN1-230ENST00000636257 CAMSAP1Q5T5Y3 1602 aa21.66■■□□□ 1.06
SPTAN1-230ENST00000636257 ZNF335Q9H4Z2 1342 aaPredicted RBP21.66■■□□□ 1.06
SPTAN1-230ENST00000636257 REREQ9P2R6 1566 aa21.64■■□□□ 1.05
SPTAN1-230ENST00000636257 HSPA1LP34931 641 aa21.62■■□□□ 1.05
SPTAN1-230ENST00000636257 PLCH2O75038 1416 aa21.62■■□□□ 1.05
SPTAN1-230ENST00000636257 KDM5CP41229 1560 aa21.6■■□□□ 1.05
SPTAN1-230ENST00000636257 DIP2CQ9Y2E4 1556 aa21.6■■□□□ 1.05
SPTAN1-230ENST00000636257 ZNF518AQ6AHZ1 1483 aa21.58■■□□□ 1.05
SPTAN1-230ENST00000636257 MYO5CQ9NQX4 1742 aa21.58■■□□□ 1.04
SPTAN1-230ENST00000636257 AGLP35573 1532 aa21.57■■□□□ 1.04
SPTAN1-230ENST00000636257 PHF23Q9BUL5 403 aaPredicted RBP21.57■■□□□ 1.04
SPTAN1-230ENST00000636257 ABCA6Q8N139 1617 aa21.54■■□□□ 1.04
SPTAN1-230ENST00000636257 NCKAP5LQ9HCH0 1330 aa21.54■■□□□ 1.04
SPTAN1-230ENST00000636257 SUPT6HQ7KZ85 1726 aaKnown RBP21.53■■□□□ 1.04
SPTAN1-230ENST00000636257 NPATQ14207 1427 aa21.53■■□□□ 1.04
SPTAN1-230ENST00000636257 ZNF142P52746 1687 aaPredicted RBP21.53■■□□□ 1.04
SPTAN1-230ENST00000636257 PLA2R1Q13018 1463 aa21.52■■□□□ 1.04
SPTAN1-230ENST00000636257 ESF1Q9H501 851 aaKnown RBP21.52■■□□□ 1.04
SPTAN1-230ENST00000636257 MROH2AA6NES4 1674 aa21.52■■□□□ 1.04
SPTAN1-230ENST00000636257 CNTLNQ9NXG0 1405 aa21.52■■□□□ 1.04
SPTAN1-230ENST00000636257 SCAF1Q9H7N4 1312 aaKnown RBP21.51■■□□□ 1.03
SPTAN1-230ENST00000636257 EFCAB2Q5VUJ9 269 aa21.49■■□□□ 1.03
SPTAN1-230ENST00000636257 TCOF1Q13428 1488 aaKnown RBP21.49■■□□□ 1.03
SPTAN1-230ENST00000636257 PIP4K2BP78356 416 aa21.48■■□□□ 1.03
SPTAN1-230ENST00000636257 PKD2Q13563 968 aa21.48■■□□□ 1.03
SPTAN1-230ENST00000636257 TOM1O60784 492 aa21.46■■□□□ 1.03
SPTAN1-230ENST00000636257 MYO3AQ8NEV4 1616 aa21.46■■□□□ 1.03
SPTAN1-230ENST00000636257 AFAP1Q8N556 730 aa21.45■■□□□ 1.02
SPTAN1-230ENST00000636257 MLH3Q9UHC1 1453 aa21.45■■□□□ 1.02
SPTAN1-230ENST00000636257 CDK13Q14004 1512 aaKnown RBP21.45■■□□□ 1.02
SPTAN1-230ENST00000636257 CPS1P31327 1500 aa21.42■■□□□ 1.02
SPTAN1-230ENST00000636257 CEP170BQ9Y4F5 1589 aaPredicted RBP21.42■■□□□ 1.02
SPTAN1-230ENST00000636257 MYT1LQ9UL68 1186 aa21.41■■□□□ 1.02
SPTAN1-230ENST00000636257 PPP6R1Q9UPN7 881 aa21.41■■□□□ 1.02
SPTAN1-230ENST00000636257 ARHGAP5Q13017 1502 aa21.38■■□□□ 1.01
SPTAN1-230ENST00000636257 ALKQ9UM73 1620 aa21.37■■□□□ 1.01
SPTAN1-230ENST00000636257 KIF14Q15058 1648 aa21.36■■□□□ 1.01
SPTAN1-230ENST00000636257 KIDINS220Q9ULH0 1771 aa21.36■■□□□ 1.01
SPTAN1-230ENST00000636257 ZMYM3Q14202 1370 aa21.36■■□□□ 1.01
SPTAN1-230ENST00000636257 PTPRKQ15262 1439 aa21.34■■□□□ 1.01
SPTAN1-230ENST00000636257 POLR1AO95602 1720 aaPredicted RBP21.34■■□□□ 1.01
SPTAN1-230ENST00000636257 CLTCQ00610 1675 aaKnown RBP21.32■■□□□ 1
SPTAN1-230ENST00000636257 RGS17Q9UGC6 210 aaPredicted RBP21.32■■□□□ 1
SPTAN1-230ENST00000636257 CDC42BPBQ9Y5S2 1711 aa21.32■■□□□ 1
SPTAN1-230ENST00000636257 SHANK2Q9UPX8 1470 aa21.32■■□□□ 1
SPTAN1-230ENST00000636257 ITSN2Q9NZM3 1697 aa21.31■■□□□ 1
SPTAN1-230ENST00000636257 ABCC1P33527 1531 aa21.29■■□□□ 1
SPTAN1-230ENST00000636257 NEURL4Q96JN8 1562 aa21.28■■□□□ 1
SPTAN1-230ENST00000636257 RANGAP1P46060 587 aaPredicted RBP21.28■■□□□ 1
SPTAN1-230ENST00000636257 DNMT1P26358 1616 aaKnown RBP21.27■■□□□ 1
SPTAN1-230ENST00000636257 VWDEQ8N2E2 1590 aa21.24■□□□□ 0.99
SPTAN1-230ENST00000636257 PREX2Q70Z35 1606 aa21.23■□□□□ 0.99
SPTAN1-230ENST00000636257 A2ML1A8K2U0 1454 aa21.23■□□□□ 0.99
SPTAN1-230ENST00000636257 TROQ12816 1431 aaPredicted RBP21.21■□□□□ 0.99
SPTAN1-230ENST00000636257 CDK11AQ9UQ88 783 aaPredicted RBP21.2■□□□□ 0.98
SPTAN1-230ENST00000636257 RNF17Q9BXT8 1623 aaKnown RBP21.18■□□□□ 0.98
SPTAN1-230ENST00000636257 CSRNP3Q8WYN3 585 aa21.17■□□□□ 0.98
SPTAN1-230ENST00000636257 CLIP1P30622 1438 aa21.17■□□□□ 0.98
SPTAN1-230ENST00000636257 PLXNC1O60486 1568 aa21.16■□□□□ 0.98
SPTAN1-230ENST00000636257 SAMD9LQ8IVG5 1584 aa21.16■□□□□ 0.98
SPTAN1-230ENST00000636257 SETD1AO15047 1707 aaKnown RBP21.15■□□□□ 0.98
SPTAN1-230ENST00000636257 SENP3Q9H4L4 574 aaPredicted RBP21.15■□□□□ 0.98
SPTAN1-230ENST00000636257 POTEAQ6S8J7 498 aa21.13■□□□□ 0.97
SPTAN1-230ENST00000636257 STRCP1A6NGW2 1772 aa21.13■□□□□ 0.97
SPTAN1-230ENST00000636257 SYNMO15061 1565 aa21.12■□□□□ 0.97
SPTAN1-230ENST00000636257 LRRIQ1Q96JM4 1722 aa21.1■□□□□ 0.97
SPTAN1-230ENST00000636257 DEPDC5O75140 1603 aa21.1■□□□□ 0.97
SPTAN1-230ENST00000636257 CDC42BPAQ5VT25 1732 aa21.09■□□□□ 0.97
SPTAN1-230ENST00000636257 LRRC7Q96NW7 1537 aa21.09■□□□□ 0.97
SPTAN1-230ENST00000636257 FMN1Q68DA7 1419 aa21.09■□□□□ 0.97
SPTAN1-230ENST00000636257 MED14O60244 1454 aa21.08■□□□□ 0.97
SPTAN1-230ENST00000636257 ATP1B4Q9UN42 357 aaPredicted RBP21.08■□□□□ 0.97
SPTAN1-230ENST00000636257 IQGAP1P46940 1657 aa21.06■□□□□ 0.96
SPTAN1-230ENST00000636257 ATP7AQ04656 1500 aa21.06■□□□□ 0.96
SPTAN1-230ENST00000636257 A2MP01023 1474 aa21.06■□□□□ 0.96
SPTAN1-230ENST00000636257 INO80Q9ULG1 1556 aaPredicted RBP21.06■□□□□ 0.96
SPTAN1-230ENST00000636257 NPHP4O75161 1426 aaPredicted RBP21.04■□□□□ 0.96
SPTAN1-230ENST00000636257 ANKLE2Q86XL3 938 aa21.04■□□□□ 0.96
SPTAN1-230ENST00000636257 SPAG9O60271 1321 aaKnown RBP21.04■□□□□ 0.96
SPTAN1-230ENST00000636257 SYCP2Q9BX26 1530 aa21.03■□□□□ 0.96
SPTAN1-230ENST00000636257 GGT6Q6P531 493 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms