RNA–Protein interactions for RNA: ENST00000630962.1

SRP54-214, Transcript of signal recognition particle 54, humanhuman

TSL 5 BASIC

Gene SRP54, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-214ENST00000630962 RIMBP2O15034 1052 aa8.94□□□□□ -0.98
SRP54-214ENST00000630962 PDE4AP27815 886 aa8.94□□□□□ -0.98
SRP54-214ENST00000630962 DOK7Q18PE1 504 aa8.93□□□□□ -0.98
SRP54-214ENST00000630962 GPHNQ9NQX3 736 aaPredicted RBP8.92□□□□□ -0.98
SRP54-214ENST00000630962 KIF3CO14782 793 aa8.9□□□□□ -0.98
SRP54-214ENST00000630962 C2orf72A6NCS6 295 aa8.89□□□□□ -0.99
SRP54-214ENST00000630962 ZSWIM6Q9HCJ5 1215 aa8.89□□□□□ -0.99
SRP54-214ENST00000630962 FOXK1P85037 733 aa8.88□□□□□ -0.99
SRP54-214ENST00000630962 ZNF710Q8N1W2 664 aa8.88□□□□□ -0.99
SRP54-214ENST00000630962 TMEM92Q6UXU6 159 aa8.87□□□□□ -0.99
SRP54-214ENST00000630962 CRISPLD2Q9H0B8 497 aa8.87□□□□□ -0.99
SRP54-214ENST00000630962 PLCB2Q00722 1185 aa8.86□□□□□ -0.99
SRP54-214ENST00000630962 SLC34A2O95436 690 aa8.85□□□□□ -0.99
SRP54-214ENST00000630962 FAM163AQ96GL9 167 aaPredicted RBP8.85□□□□□ -0.99
SRP54-214ENST00000630962 DDX27Q96GQ7 796 aaKnown RBP8.83□□□□□ -1
SRP54-214ENST00000630962 TBC1D12O60347 775 aa8.82□□□□□ -1
SRP54-214ENST00000630962 LARP6Q9BRS8 491 aaKnown RBP8.82□□□□□ -1
SRP54-214ENST00000630962 MFSD10Q14728 455 aa8.81□□□□□ -1
SRP54-214ENST00000630962 PPP1R15BQ5SWA1 713 aa8.81□□□□□ -1
SRP54-214ENST00000630962 PLPP6Q8IY26 295 aa8.81□□□□□ -1
SRP54-214ENST00000630962 WDR70Q9NW82 654 aa8.81□□□□□ -1
SRP54-214ENST00000630962 NCKAP5LQ9HCH0 1330 aa8.8□□□□□ -1
SRP54-214ENST00000630962 HOXB3P14651 431 aaPredicted RBP8.8□□□□□ -1
SRP54-214ENST00000630962 DSG2Q14126 1118 aa8.8□□□□□ -1
SRP54-214ENST00000630962 ST18O60284 1047 aa8.79□□□□□ -1
SRP54-214ENST00000630962 HOXB1P14653 301 aaPredicted RBP8.77□□□□□ -1.01
SRP54-214ENST00000630962 PTCD2Q8WV60 388 aaKnown RBP8.77□□□□□ -1.01
SRP54-214ENST00000630962 CADPS2Q86UW7 1296 aa8.76□□□□□ -1.01
SRP54-214ENST00000630962 ZNF316A6NFI3 1004 aaPredicted RBP8.75□□□□□ -1.01
SRP54-214ENST00000630962 GPR153Q6NV75 609 aa8.73□□□□□ -1.01
SRP54-214ENST00000630962 PCDH10Q9P2E7 1040 aa8.73□□□□□ -1.01
SRP54-214ENST00000630962 PCDHGA4Q9Y5G9 962 aa8.73□□□□□ -1.01
SRP54-214ENST00000630962 EMP3P54852 163 aa8.72□□□□□ -1.01
SRP54-214ENST00000630962 PSDA5PKW4 1024 aaPredicted RBP8.71□□□□□ -1.02
SRP54-214ENST00000630962 CAMK2BQ13554 666 aa8.71□□□□□ -1.02
SRP54-214ENST00000630962 TSHZ2Q9NRE2 1034 aa8.71□□□□□ -1.02
SRP54-214ENST00000630962 HAP1P54257 671 aaPredicted RBP8.7□□□□□ -1.02
SRP54-214ENST00000630962 E2F4Q16254 413 aa8.7□□□□□ -1.02
SRP54-214ENST00000630962 OXER1Q8TDS5 423 aa8.7□□□□□ -1.02
SRP54-214ENST00000630962 POTEMA6NI47 508 aa8.69□□□□□ -1.02
SRP54-214ENST00000630962 ARSIQ5FYB1 569 aa8.69□□□□□ -1.02
SRP54-214ENST00000630962 POTEGQ6S5H5 508 aa8.69□□□□□ -1.02
SRP54-214ENST00000630962 MAP3K9P80192 1104 aa8.68□□□□□ -1.02
SRP54-214ENST00000630962 LCE2DQ5TA82 110 aaPredicted RBP8.68□□□□□ -1.02
SRP54-214ENST00000630962 ERBB3P21860 1342 aa8.68□□□□□ -1.02
SRP54-214ENST00000630962 P3H3Q8IVL6 736 aa8.67□□□□□ -1.02
SRP54-214ENST00000630962 VSIG10Q8N0Z9 540 aa8.66□□□□□ -1.02
SRP54-214ENST00000630962 ARIH1Q9Y4X5 557 aaPredicted RBP8.65□□□□□ -1.02
SRP54-214ENST00000630962 UPF1Q92900 1129 aaKnown RBP eCLIP8.64□□□□□ -1.03
SRP54-214ENST00000630962 MARVELD3Q96A59 401 aa8.64□□□□□ -1.03
SRP54-214ENST00000630962 SPDYE16A6NNV3 312 aaPredicted RBP8.63□□□□□ -1.03
SRP54-214ENST00000630962 NUDT7P0C024 238 aa8.63□□□□□ -1.03
SRP54-214ENST00000630962 FAM205CA6NFA0 338 aa8.62□□□□□ -1.03
SRP54-214ENST00000630962 EVI5O60447 810 aa8.61□□□□□ -1.03
SRP54-214ENST00000630962 HS3ST6Q96QI5 342 aa8.61□□□□□ -1.03
SRP54-214ENST00000630962 ANO8Q9HCE9 1232 aaPredicted RBP8.61□□□□□ -1.03
SRP54-214ENST00000630962 EMILIN3Q9NT22 766 aa8.61□□□□□ -1.03
SRP54-214ENST00000630962 KDM4FA0A1W2PPD8 638 aa8.6□□□□□ -1.03
SRP54-214ENST00000630962 ARHGEF1Q92888 912 aaKnown RBP8.6□□□□□ -1.03
SRP54-214ENST00000630962 PPP4R3BQ5MIZ7 849 aa8.59□□□□□ -1.03
SRP54-214ENST00000630962 VARS2Q5ST30 1063 aaKnown RBP8.59□□□□□ -1.03
SRP54-214ENST00000630962 PBX2P40425 430 aa8.58□□□□□ -1.04
SRP54-214ENST00000630962 ZNF687Q8N1G0 1237 aa8.58□□□□□ -1.04
SRP54-214ENST00000630962 KHSRPQ92945 711 aaKnown RBP eCLIP8.58□□□□□ -1.042e-7■□□□□ 9.6
SRP54-214ENST00000630962 KCNH8Q96L42 1107 aa8.58□□□□□ -1.04
SRP54-214ENST00000630962 LHX6Q9UPM6 363 aa8.58□□□□□ -1.04
SRP54-214ENST00000630962 DPYSL4O14531 572 aa8.57□□□□□ -1.04
SRP54-214ENST00000630962 PDIA6Q15084 440 aa8.56□□□□□ -1.04
SRP54-214ENST00000630962 CDAN1Q8IWY9 1227 aa8.56□□□□□ -1.04
SRP54-214ENST00000630962 JPH4Q96JJ6 628 aa8.56□□□□□ -1.04
SRP54-214ENST00000630962 PTGER2P43116 358 aa8.55□□□□□ -1.04
SRP54-214ENST00000630962 FBXW7Q969H0 707 aa8.54□□□□□ -1.04
SRP54-214ENST00000630962 EPAS1Q99814 870 aa8.54□□□□□ -1.04
SRP54-214ENST00000630962 PHF14O94880 888 aa8.53□□□□□ -1.04
SRP54-214ENST00000630962 FOSBP53539 338 aa8.52□□□□□ -1.05
SRP54-214ENST00000630962 ZNF454Q8N9F8 522 aa8.52□□□□□ -1.05
SRP54-214ENST00000630962 KCNV2Q8TDN2 545 aa8.51□□□□□ -1.05
SRP54-214ENST00000630962 TYW1BQ6NUM6 668 aa8.5□□□□□ -1.05
SRP54-214ENST00000630962 ZDHHC16Q969W1 377 aa8.5□□□□□ -1.05
SRP54-214ENST00000630962 ARHGAP33O14559 1287 aa8.49□□□□□ -1.05
SRP54-214ENST00000630962 BCL2L12Q9HB09 334 aa8.49□□□□□ -1.05
SRP54-214ENST00000630962 KDM2AQ9Y2K7 1162 aa8.48□□□□□ -1.05
SRP54-214ENST00000630962 POTEB3A0JP26 581 aa8.47□□□□□ -1.05
SRP54-214ENST00000630962 PTPREP23469 700 aa8.47□□□□□ -1.05
SRP54-214ENST00000630962 POTEBQ6S5H4 581 aa8.47□□□□□ -1.05
SRP54-214ENST00000630962 SMYD5Q6GMV2 418 aa8.46□□□□□ -1.06
SRP54-214ENST00000630962 PCDHGA10Q9Y5H3 936 aa8.45□□□□□ -1.06
SRP54-214ENST00000630962 TK2O00142 265 aa8.43□□□□□ -1.06
SRP54-214ENST00000630962 TULP1O00294 542 aaPredicted RBP8.43□□□□□ -1.06
SRP54-214ENST00000630962 LSM11P83369 360 aaKnown RBP eCLIP8.43□□□□□ -1.06
SRP54-214ENST00000630962 DDX12PQ92771 950 aa8.43□□□□□ -1.06
SRP54-214ENST00000630962 NBR1Q14596 966 aa8.42□□□□□ -1.06
SRP54-214ENST00000630962 CERKQ8TCT0 537 aa8.42□□□□□ -1.06
SRP54-214ENST00000630962 SLC4A5Q9BY07 1137 aa8.42□□□□□ -1.06
SRP54-214ENST00000630962 GRXCR2A6NFK2 248 aa8.41□□□□□ -1.06
SRP54-214ENST00000630962 KCNK17Q96T54 332 aa8.41□□□□□ -1.06
SRP54-214ENST00000630962 KRTAP3-3Q9BYR6 98 aa8.41□□□□□ -1.06
SRP54-214ENST00000630962 KRTAP3-2Q9BYR7 98 aa8.41□□□□□ -1.06
SRP54-214ENST00000630962 PPP1R3GB7ZBB8 358 aa8.4□□□□□ -1.06
SRP54-214ENST00000630962 SLC24A1O60721 1099 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms