RNA–Protein interactions for RNA: ENST00000628904.2

PKP4-217, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 3,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-217ENST00000628904 FYCO1Q9BQS8 1478 aa10.3□□□□□ -0.76
PKP4-217ENST00000628904 C11orf95C9JLR9 678 aaPredicted RBP10.29□□□□□ -0.76
PKP4-217ENST00000628904 SAFB2Q14151 953 aaKnown RBP eCLIP10.29□□□□□ -0.76
PKP4-217ENST00000628904 MLECQ14165 292 aa10.28□□□□□ -0.76
PKP4-217ENST00000628904 BCL11AQ9H165 835 aa10.28□□□□□ -0.76
PKP4-217ENST00000628904 KIF21AQ7Z4S6 1674 aa10.28□□□□□ -0.76
PKP4-217ENST00000628904 TNNT2P45379 298 aaPredicted RBP10.28□□□□□ -0.76
PKP4-217ENST00000628904 ST20-MTHFSA0A0A6YYL1 179 aa10.27□□□□□ -0.77
PKP4-217ENST00000628904 EPRSP07814 1512 aaKnown RBP10.27□□□□□ -0.77
PKP4-217ENST00000628904 NAIPQ13075 1403 aa10.27□□□□□ -0.77
PKP4-217ENST00000628904 CYB5RLQ6IPT4 315 aa10.26□□□□□ -0.77
PKP4-217ENST00000628904 WASHC2AQ641Q2 1341 aa10.26□□□□□ -0.77
PKP4-217ENST00000628904 KIF3BO15066 747 aa10.26□□□□□ -0.77
PKP4-217ENST00000628904 IFT140Q96RY7 1462 aa10.24□□□□□ -0.77
PKP4-217ENST00000628904 PLEKHG5O94827 1062 aa10.24□□□□□ -0.77
PKP4-217ENST00000628904 SLC24A1O60721 1099 aa10.24□□□□□ -0.77
PKP4-217ENST00000628904 UACAQ9BZF9 1416 aa10.23□□□□□ -0.77
PKP4-217ENST00000628904 ANKRD30AQ9BXX3 1397 aa10.23□□□□□ -0.77
PKP4-217ENST00000628904 THOC2Q8NI27 1593 aaKnown RBP10.23□□□□□ -0.77
PKP4-217ENST00000628904 NBPF1Q3BBV0 1214 aa10.22□□□□□ -0.77
PKP4-217ENST00000628904 MAPKBP1O60336 1514 aa10.22□□□□□ -0.77
PKP4-217ENST00000628904 IQGAP2Q13576 1575 aa10.21□□□□□ -0.77
PKP4-217ENST00000628904 GRIN2AQ12879 1464 aa10.21□□□□□ -0.77
PKP4-217ENST00000628904 STAG3Q9UJ98 1225 aa10.21□□□□□ -0.78
PKP4-217ENST00000628904 TIMELESSQ9UNS1 1208 aa10.21□□□□□ -0.78
PKP4-217ENST00000628904 EFCAB2Q5VUJ9 269 aa10.21□□□□□ -0.78
PKP4-217ENST00000628904 B4GALNT3Q6L9W6 998 aa10.21□□□□□ -0.78
PKP4-217ENST00000628904 ARHGEF11O15085 1522 aa10.21□□□□□ -0.78
PKP4-217ENST00000628904 HFM1A2PYH4 1435 aa10.2□□□□□ -0.78
PKP4-217ENST00000628904 EFCAB5A4FU69 1503 aa10.2□□□□□ -0.78
PKP4-217ENST00000628904 ERICH6Q7L0X2 663 aa10.2□□□□□ -0.78
PKP4-217ENST00000628904 KIAA0586Q9BVV6 1533 aa10.19□□□□□ -0.78
PKP4-217ENST00000628904 KIF15Q9NS87 1388 aa10.19□□□□□ -0.78
PKP4-217ENST00000628904 NEUROD2Q15784 382 aa10.19□□□□□ -0.78
PKP4-217ENST00000628904 STK26Q9P289 416 aa10.18□□□□□ -0.78
PKP4-217ENST00000628904 SPAG9O60271 1321 aaKnown RBP10.18□□□□□ -0.78
PKP4-217ENST00000628904 KIF7Q2M1P5 1343 aa10.18□□□□□ -0.78
PKP4-217ENST00000628904 ROCK2O75116 1388 aaKnown RBP10.18□□□□□ -0.78
PKP4-217ENST00000628904 ANKRD50Q9ULJ7 1429 aa10.17□□□□□ -0.78
PKP4-217ENST00000628904 MAGI3Q5TCQ9 1506 aa10.17□□□□□ -0.78
PKP4-217ENST00000628904 ABCC5O15440 1437 aa10.17□□□□□ -0.78
PKP4-217ENST00000628904 PRKRIP1Q9H875 184 aaPredicted RBP10.16□□□□□ -0.78
PKP4-217ENST00000628904 DAPK1P53355 1430 aa10.16□□□□□ -0.78
PKP4-217ENST00000628904 CUL7Q14999 1698 aa10.16□□□□□ -0.78
PKP4-217ENST00000628904 NUP153P49790 1475 aaKnown RBP10.15□□□□□ -0.78
PKP4-217ENST00000628904 TROQ12816 1431 aaPredicted RBP10.15□□□□□ -0.78
PKP4-217ENST00000628904 NPM2Q86SE8 214 aaKnown RBP10.14□□□□□ -0.79
PKP4-217ENST00000628904 USP47Q96K76 1375 aa10.14□□□□□ -0.79
PKP4-217ENST00000628904 RAPGEF3O95398 923 aa10.13□□□□□ -0.79
PKP4-217ENST00000628904 SYNJ2O15056 1496 aa10.13□□□□□ -0.79
PKP4-217ENST00000628904 EHBP1L1Q8N3D4 1523 aa10.13□□□□□ -0.79
PKP4-217ENST00000628904 PTPN23Q9H3S7 1636 aa10.13□□□□□ -0.79
PKP4-217ENST00000628904 OSCARQ8IYS5 282 aa10.12□□□□□ -0.79
PKP4-217ENST00000628904 TRAK1Q9UPV9 953 aa10.12□□□□□ -0.79
PKP4-217ENST00000628904 ARID4BQ4LE39 1312 aaPredicted RBP10.12□□□□□ -0.79
PKP4-217ENST00000628904 PPM1GO15355 546 aaPredicted RBP10.12□□□□□ -0.79
PKP4-217ENST00000628904 CCER2I3L3R5 266 aa10.11□□□□□ -0.79
PKP4-217ENST00000628904 SUPT6HQ7KZ85 1726 aaKnown RBP10.11□□□□□ -0.79
PKP4-217ENST00000628904 TMEM132EQ6IEE7 984 aa10.11□□□□□ -0.79
PKP4-217ENST00000628904 DISP1Q96F81 1524 aa10.1□□□□□ -0.79
PKP4-217ENST00000628904 PANK3Q9H999 370 aa10.1□□□□□ -0.79
PKP4-217ENST00000628904 KNSTRNQ9Y448 316 aa10.1□□□□□ -0.79
PKP4-217ENST00000628904 C9orf84Q5VXU9 1444 aa10.1□□□□□ -0.79
PKP4-217ENST00000628904 CCDC136Q96JN2 1154 aa10.1□□□□□ -0.79
PKP4-217ENST00000628904 HECW1Q76N89 1606 aa10.1□□□□□ -0.79
PKP4-217ENST00000628904 ESF1Q9H501 851 aaKnown RBP10.09□□□□□ -0.79
PKP4-217ENST00000628904 CCDC7Q96M83 1385 aa10.09□□□□□ -0.79
PKP4-217ENST00000628904 NUTM2FA1L443 756 aa10.09□□□□□ -0.79
PKP4-217ENST00000628904 ABCA5Q8WWZ7 1642 aa10.09□□□□□ -0.79
PKP4-217ENST00000628904 CCDC146Q8IYE0 955 aa10.09□□□□□ -0.79
PKP4-217ENST00000628904 CCDC144AA2RUR9 1427 aa10.09□□□□□ -0.79
PKP4-217ENST00000628904 ATP10BO94823 1461 aa10.09□□□□□ -0.79
PKP4-217ENST00000628904 TARBP1Q13395 1621 aaKnown RBP10.08□□□□□ -0.8
PKP4-217ENST00000628904 ANKRD30BQ9BXX2 1392 aa10.08□□□□□ -0.8
PKP4-217ENST00000628904 NCOA1Q15788 1441 aa10.08□□□□□ -0.8
PKP4-217ENST00000628904 CAMSAP2Q08AD1 1489 aa10.08□□□□□ -0.8
PKP4-217ENST00000628904 ARHGAP5Q13017 1502 aa10.08□□□□□ -0.8
PKP4-217ENST00000628904 EIF4G3O43432 1585 aaKnown RBP10.08□□□□□ -0.8
PKP4-217ENST00000628904 SOX12O15370 315 aa10.08□□□□□ -0.8
PKP4-217ENST00000628904 WDR43Q15061 677 aaKnown RBP eCLIP10.08□□□□□ -0.8
PKP4-217ENST00000628904 MAP3K1Q13233 1512 aa10.08□□□□□ -0.8
PKP4-217ENST00000628904 GPATCH8Q9UKJ3 1502 aaKnown RBP10.08□□□□□ -0.8
PKP4-217ENST00000628904 WASHC2CQ9Y4E1 1318 aa10.07□□□□□ -0.8
PKP4-217ENST00000628904 CTTNBP2Q8WZ74 1663 aa10.07□□□□□ -0.8
PKP4-217ENST00000628904 CFAP70Q5T0N1 1121 aa10.07□□□□□ -0.8
PKP4-217ENST00000628904 MIA2Q96PC5 1412 aa10.07□□□□□ -0.8
PKP4-217ENST00000628904 ADAMTS12P58397 1594 aa10.07□□□□□ -0.8
PKP4-217ENST00000628904 SCAPERQ9BY12 1400 aa10.07□□□□□ -0.8
PKP4-217ENST00000628904 MAGI1Q96QZ7 1491 aaPredicted RBP10.07□□□□□ -0.8
PKP4-217ENST00000628904 PLIN1O60240 522 aa10.06□□□□□ -0.8
PKP4-217ENST00000628904 TMF1P82094 1093 aa10.06□□□□□ -0.8
PKP4-217ENST00000628904 UGGT2Q9NYU1 1516 aa10.06□□□□□ -0.8
PKP4-217ENST00000628904 TSHZ2Q9NRE2 1034 aa10.06□□□□□ -0.8
PKP4-217ENST00000628904 KDM6BO15054 1643 aa10.05□□□□□ -0.8
PKP4-217ENST00000628904 CANXP27824 592 aaKnown RBP10.04□□□□□ -0.8
PKP4-217ENST00000628904 TRHP20396 242 aaPredicted RBP10.04□□□□□ -0.8
PKP4-217ENST00000628904 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.04□□□□□ -0.83e-7■■■■□ 24.5
PKP4-217ENST00000628904 FAM69CQ0P6D2 419 aa10.03□□□□□ -0.8
PKP4-217ENST00000628904 CDCA7LQ96GN5 454 aa10.03□□□□□ -0.8
PKP4-217ENST00000628904 RRP7AQ9Y3A4 280 aaKnown RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 207 ms