RNA–Protein interactions for RNA: ENST00000628614.1

SPTAN1-214, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTAN1, Length 993 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-214ENST00000628614 POGZQ7Z3K3 1410 aa27.69■■■□□ 2.02
SPTAN1-214ENST00000628614 ARHGAP5Q13017 1502 aa27.69■■■□□ 2.02
SPTAN1-214ENST00000628614 MAGI2Q86UL8 1455 aa27.67■■■□□ 2.02
SPTAN1-214ENST00000628614 ZFYVE16Q7Z3T8 1539 aa27.64■■■□□ 2.02
SPTAN1-214ENST00000628614 PREX2Q70Z35 1606 aa27.62■■■□□ 2.01
SPTAN1-214ENST00000628614 ARID4BQ4LE39 1312 aaPredicted RBP27.62■■■□□ 2.01
SPTAN1-214ENST00000628614 YEATS2Q9ULM3 1422 aa27.59■■■□□ 2.01
SPTAN1-214ENST00000628614 ZNF518AQ6AHZ1 1483 aa27.59■■■□□ 2.01
SPTAN1-214ENST00000628614 CDC42BPBQ9Y5S2 1711 aa27.59■■■□□ 2.01
SPTAN1-214ENST00000628614 ADAMTSL3P82987 1691 aa27.59■■■□□ 2.01
SPTAN1-214ENST00000628614 BCORL1Q5H9F3 1711 aa27.58■■■□□ 2.01
SPTAN1-214ENST00000628614 KDM5CP41229 1560 aa27.53■■■□□ 2
SPTAN1-214ENST00000628614 MTUS2Q5JR59 1369 aa27.53■■■□□ 2
SPTAN1-214ENST00000628614 CDC42BPAQ5VT25 1732 aa27.53■■■□□ 2
SPTAN1-214ENST00000628614 ABCC1P33527 1531 aa27.51■■■□□ 2
SPTAN1-214ENST00000628614 LOC105371045A0A1W2PR82 267 aa27.5■■□□□ 1.99
SPTAN1-214ENST00000628614 PTPRMP28827 1452 aa27.5■■□□□ 1.99
SPTAN1-214ENST00000628614 AFAP1Q8N556 730 aa27.49■■□□□ 1.99
SPTAN1-214ENST00000628614 ATP10AO60312 1499 aa27.49■■□□□ 1.99
SPTAN1-214ENST00000628614 MADDQ8WXG6 1647 aa27.49■■□□□ 1.99
SPTAN1-214ENST00000628614 C9orf84Q5VXU9 1444 aa27.48■■□□□ 1.99
SPTAN1-214ENST00000628614 GPATCH8Q9UKJ3 1502 aaKnown RBP27.47■■□□□ 1.99
SPTAN1-214ENST00000628614 HECW2Q9P2P5 1572 aa27.47■■□□□ 1.99
SPTAN1-214ENST00000628614 EHBP1L1Q8N3D4 1523 aa27.46■■□□□ 1.99
SPTAN1-214ENST00000628614 ITSN2Q9NZM3 1697 aa27.45■■□□□ 1.98
SPTAN1-214ENST00000628614 ARHGEF12Q9NZN5 1544 aa27.45■■□□□ 1.98
SPTAN1-214ENST00000628614 SIGLEC1Q9BZZ2 1709 aa27.44■■□□□ 1.98
SPTAN1-214ENST00000628614 CCNB3Q8WWL7 1395 aa27.44■■□□□ 1.98
SPTAN1-214ENST00000628614 TRAPPC8Q9Y2L5 1435 aa27.43■■□□□ 1.98
SPTAN1-214ENST00000628614 MLH3Q9UHC1 1453 aa27.43■■□□□ 1.98
SPTAN1-214ENST00000628614 MYT1LQ9UL68 1186 aa27.42■■□□□ 1.98
SPTAN1-214ENST00000628614 ZNF777Q9ULD5 760 aaPredicted RBP27.41■■□□□ 1.98
SPTAN1-214ENST00000628614 SAMD9LQ8IVG5 1584 aa27.4■■□□□ 1.98
SPTAN1-214ENST00000628614 CFDP1Q9UEE9 299 aaPredicted RBP27.39■■□□□ 1.98
SPTAN1-214ENST00000628614 VPS8Q8N3P4 1428 aa27.39■■□□□ 1.97
SPTAN1-214ENST00000628614 RIMS1Q86UR5 1692 aaKnown RBP27.39■■□□□ 1.97
SPTAN1-214ENST00000628614 DIP2CQ9Y2E4 1556 aa27.39■■□□□ 1.97
SPTAN1-214ENST00000628614 PLEKHH2Q8IVE3 1493 aa27.38■■□□□ 1.97
SPTAN1-214ENST00000628614 SYCP2Q9BX26 1530 aa27.36■■□□□ 1.97
SPTAN1-214ENST00000628614 REREQ9P2R6 1566 aa27.36■■□□□ 1.97
SPTAN1-214ENST00000628614 MLECQ14165 292 aa27.36■■□□□ 1.97
SPTAN1-214ENST00000628614 KIAA1107Q9UPP5 1409 aa27.35■■□□□ 1.97
SPTAN1-214ENST00000628614 ABCA6Q8N139 1617 aa27.35■■□□□ 1.97
SPTAN1-214ENST00000628614 TIAM1Q13009 1591 aa27.35■■□□□ 1.97
SPTAN1-214ENST00000628614 FER1L4A9Z1Z3 1794 aa27.31■■□□□ 1.96
SPTAN1-214ENST00000628614 HNRNPMP52272 730 aaKnown RBP eCLIP27.3■■□□□ 1.96
SPTAN1-214ENST00000628614 KIDINS220Q9ULH0 1771 aa27.3■■□□□ 1.96
SPTAN1-214ENST00000628614 SUPT6HQ7KZ85 1726 aaKnown RBP27.28■■□□□ 1.96
SPTAN1-214ENST00000628614 NCOA2Q15596 1464 aa27.27■■□□□ 1.96
SPTAN1-214ENST00000628614 SPAG9O60271 1321 aaKnown RBP27.27■■□□□ 1.96
SPTAN1-214ENST00000628614 AGLP35573 1532 aa27.26■■□□□ 1.96
SPTAN1-214ENST00000628614 ATP7AQ04656 1500 aa27.22■■□□□ 1.95
SPTAN1-214ENST00000628614 MAP3K1Q13233 1512 aa27.22■■□□□ 1.95
SPTAN1-214ENST00000628614 LRRC9Q6ZRR7 1453 aa27.22■■□□□ 1.95
SPTAN1-214ENST00000628614 INO80Q9ULG1 1556 aaPredicted RBP27.21■■□□□ 1.95
SPTAN1-214ENST00000628614 ZNF644Q9H582 1327 aaPredicted RBP27.2■■□□□ 1.95
SPTAN1-214ENST00000628614 PLPPR3Q6T4P5 718 aa27.2■■□□□ 1.94
SPTAN1-214ENST00000628614 LMTK3Q96Q04 1460 aa27.19■■□□□ 1.94
SPTAN1-214ENST00000628614 MBD5Q9P267 1494 aa27.18■■□□□ 1.94
SPTAN1-214ENST00000628614 CAMSAP2Q08AD1 1489 aa27.13■■□□□ 1.93
SPTAN1-214ENST00000628614 ESF1Q9H501 851 aaKnown RBP27.12■■□□□ 1.93
SPTAN1-214ENST00000628614 PLXNC1O60486 1568 aa27.11■■□□□ 1.93
SPTAN1-214ENST00000628614 A2MP01023 1474 aa27.11■■□□□ 1.93
SPTAN1-214ENST00000628614 RTEL1-TNFRSF6BF6WH68 1400 aa27.1■■□□□ 1.93
SPTAN1-214ENST00000628614 CCDC141Q6ZP82 1450 aa27.1■■□□□ 1.93
SPTAN1-214ENST00000628614 KANK4Q5T7N3 995 aaPredicted RBP27.09■■□□□ 1.93
SPTAN1-214ENST00000628614 CNTLNQ9NXG0 1405 aa27.08■■□□□ 1.93
SPTAN1-214ENST00000628614 CEBPAP49715 358 aaPredicted RBP27.08■■□□□ 1.93
SPTAN1-214ENST00000628614 RSPH4AQ5TD94 716 aa27.08■■□□□ 1.93
SPTAN1-214ENST00000628614 APLP2Q06481 763 aa27.07■■□□□ 1.92
SPTAN1-214ENST00000628614 ADGBQ8N7X0 1667 aa27.07■■□□□ 1.92
SPTAN1-214ENST00000628614 ARHGEF5Q12774 1597 aa27.04■■□□□ 1.92
SPTAN1-214ENST00000628614 PREX1Q8TCU6 1659 aa27.04■■□□□ 1.92
SPTAN1-214ENST00000628614 C3P01024 1663 aa27.02■■□□□ 1.92
SPTAN1-214ENST00000628614 MYOM3Q5VTT5 1437 aa27.01■■□□□ 1.91
SPTAN1-214ENST00000628614 HSPA2P54652 639 aa27.01■■□□□ 1.91
SPTAN1-214ENST00000628614 MIA2Q96PC5 1412 aa27■■□□□ 1.91
SPTAN1-214ENST00000628614 UHRF1BP1Q6BDS2 1440 aa26.99■■□□□ 1.91
SPTAN1-214ENST00000628614 MROH2AA6NES4 1674 aa26.98■■□□□ 1.91
SPTAN1-214ENST00000628614 DHX29Q7Z478 1369 aaKnown RBP26.98■■□□□ 1.91
SPTAN1-214ENST00000628614 TSPY4P0CV99 314 aa26.96■■□□□ 1.91
SPTAN1-214ENST00000628614 TSPY10P0CW01 314 aa26.96■■□□□ 1.91
SPTAN1-214ENST00000628614 PPP6R1Q9UPN7 881 aa26.95■■□□□ 1.9
SPTAN1-214ENST00000628614 GGT6Q6P531 493 aa26.94■■□□□ 1.9
SPTAN1-214ENST00000628614 SETD1BQ9UPS6 1966 aaKnown RBP26.93■■□□□ 1.9
SPTAN1-214ENST00000628614 ZMYM3Q14202 1370 aa26.92■■□□□ 1.9
SPTAN1-214ENST00000628614 NPATQ14207 1427 aa26.91■■□□□ 1.9
SPTAN1-214ENST00000628614 CLTCQ00610 1675 aaKnown RBP26.9■■□□□ 1.9
SPTAN1-214ENST00000628614 MAST1Q9Y2H9 1570 aa26.9■■□□□ 1.9
SPTAN1-214ENST00000628614 KIF3BO15066 747 aa26.86■■□□□ 1.89
SPTAN1-214ENST00000628614 FAM135AQ9P2D6 1515 aa26.84■■□□□ 1.89
SPTAN1-214ENST00000628614 PTPN23Q9H3S7 1636 aa26.83■■□□□ 1.88
SPTAN1-214ENST00000628614 FGD6Q6ZV73 1430 aa26.82■■□□□ 1.88
SPTAN1-214ENST00000628614 ILDR1Q86SU0 546 aaPredicted RBP26.81■■□□□ 1.88
SPTAN1-214ENST00000628614 PTPRKQ15262 1439 aa26.8■■□□□ 1.88
SPTAN1-214ENST00000628614 KDM5DQ9BY66 1539 aa26.8■■□□□ 1.88
SPTAN1-214ENST00000628614 SHANK2Q9UPX8 1470 aa26.78■■□□□ 1.88
SPTAN1-214ENST00000628614 TCOF1Q13428 1488 aaKnown RBP26.77■■□□□ 1.88
SPTAN1-214ENST00000628614 DMRT2Q9Y5R5 561 aa26.76■■□□□ 1.87
SPTAN1-214ENST00000628614 ABCC5O15440 1437 aa26.75■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms