RNA–Protein interactions for RNA: ENST00000625883.1

CDR1-202, Transcript of cerebellar degeneration related protein 1, humanhuman

BASIC

Gene CDR1, Length 1,485 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1-202ENST00000625883 L3MBTL3Q96JM7 780 aaPredicted RBP9.27□□□□□ -0.93
CDR1-202ENST00000625883 LARP6Q9BRS8 491 aaKnown RBP9.27□□□□□ -0.93
CDR1-202ENST00000625883 DPY19L2Q6NUT2 758 aa9.26□□□□□ -0.93
CDR1-202ENST00000625883 MAMSTRQ6ZN01 415 aa9.25□□□□□ -0.93
CDR1-202ENST00000625883 PDCD7Q8N8D1 485 aaKnown RBP9.25□□□□□ -0.93
CDR1-202ENST00000625883 ARHGEF1Q92888 912 aaKnown RBP9.25□□□□□ -0.93
CDR1-202ENST00000625883 COLQQ9Y215 455 aaPredicted RBP9.24□□□□□ -0.93
CDR1-202ENST00000625883 DDX27Q96GQ7 796 aaKnown RBP9.22□□□□□ -0.93
CDR1-202ENST00000625883 LHX8Q68G74 356 aa9.21□□□□□ -0.94
CDR1-202ENST00000625883 POTEFA5A3E0 1075 aa9.2□□□□□ -0.94
CDR1-202ENST00000625883 MICALL2Q8IY33 904 aa9.2□□□□□ -0.94
CDR1-202ENST00000625883 SCUBE2Q9NQ36 999 aa9.2□□□□□ -0.94
CDR1-202ENST00000625883 CAMK2BQ13554 666 aa9.19□□□□□ -0.94
CDR1-202ENST00000625883 GPHNQ9NQX3 736 aaPredicted RBP9.18□□□□□ -0.94
CDR1-202ENST00000625883 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.17□□□□□ -0.94
CDR1-202ENST00000625883 BOLA1Q9Y3E2 137 aa9.17□□□□□ -0.94
CDR1-202ENST00000625883 SEMA3EO15041 775 aa9.16□□□□□ -0.94
CDR1-202ENST00000625883 C3orf67Q6ZVT6 689 aa9.16□□□□□ -0.94
CDR1-202ENST00000625883 TMEM121BQ9BXQ6 578 aaPredicted RBP9.16□□□□□ -0.94
CDR1-202ENST00000625883 ARIH1Q9Y4X5 557 aaPredicted RBP9.16□□□□□ -0.94
CDR1-202ENST00000625883 PPP1R15BQ5SWA1 713 aa9.15□□□□□ -0.94
CDR1-202ENST00000625883 LMOD2Q6P5Q4 547 aa9.15□□□□□ -0.94
CDR1-202ENST00000625883 TESPA1A2RU30 521 aaPredicted RBP9.15□□□□□ -0.95
CDR1-202ENST00000625883 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.14□□□□□ -0.95
CDR1-202ENST00000625883 DSG2Q14126 1118 aa9.13□□□□□ -0.95
CDR1-202ENST00000625883 POTEB2H3BUK9 544 aa9.11□□□□□ -0.95
CDR1-202ENST00000625883 KIF3CO14782 793 aa9.09□□□□□ -0.95
CDR1-202ENST00000625883 FOXK1P85037 733 aa9.09□□□□□ -0.95
CDR1-202ENST00000625883 TMC2Q8TDI7 906 aa9.09□□□□□ -0.95
CDR1-202ENST00000625883 EMILIN3Q9NT22 766 aa9.09□□□□□ -0.95
CDR1-202ENST00000625883 C2orf72A6NCS6 295 aa9.08□□□□□ -0.96
CDR1-202ENST00000625883 PLSCR2Q9NRY7 297 aa9.08□□□□□ -0.96
CDR1-202ENST00000625883 TULP1O00294 542 aaPredicted RBP9.07□□□□□ -0.96
CDR1-202ENST00000625883 TMEM92Q6UXU6 159 aa9.06□□□□□ -0.96
CDR1-202ENST00000625883 DPYSL4O14531 572 aa9.05□□□□□ -0.96
CDR1-202ENST00000625883 PLPP6Q8IY26 295 aa9.05□□□□□ -0.96
CDR1-202ENST00000625883 POTEJP0CG39 1038 aa9.04□□□□□ -0.96
CDR1-202ENST00000625883 SLAIN1Q8ND83 568 aa9.04□□□□□ -0.96
CDR1-202ENST00000625883 ZC3H15Q8WU90 426 aaKnown RBP9.03□□□□□ -0.96
CDR1-202ENST00000625883 OTUD5Q96G74 571 aa9.03□□□□□ -0.96
CDR1-202ENST00000625883 MLLT3P42568 568 aaPredicted RBP9.02□□□□□ -0.96
CDR1-202ENST00000625883 PDIA6Q15084 440 aa9.02□□□□□ -0.97
CDR1-202ENST00000625883 SNPHO15079 494 aa9.01□□□□□ -0.97
CDR1-202ENST00000625883 SMYD5Q6GMV2 418 aa9.01□□□□□ -0.97
CDR1-202ENST00000625883 SPDYE16A6NNV3 312 aaPredicted RBP8.99□□□□□ -0.97
CDR1-202ENST00000625883 RBM26Q5T8P6 1007 aaKnown RBP8.96□□□□□ -0.97
CDR1-202ENST00000625883 OXER1Q8TDS5 423 aa8.95□□□□□ -0.98
CDR1-202ENST00000625883 ZMYND10O75800 440 aa8.94□□□□□ -0.98
CDR1-202ENST00000625883 UPF1Q92900 1129 aaKnown RBP eCLIP8.94□□□□□ -0.98
CDR1-202ENST00000625883 MAP3K9P80192 1104 aa8.93□□□□□ -0.98
CDR1-202ENST00000625883 RIMBP2O15034 1052 aa8.92□□□□□ -0.98
CDR1-202ENST00000625883 DOK7Q18PE1 504 aa8.91□□□□□ -0.98
CDR1-202ENST00000625883 SLC24A3Q9HC58 644 aa8.91□□□□□ -0.98
CDR1-202ENST00000625883 GPIHBP1Q8IV16 184 aa8.9□□□□□ -0.98
CDR1-202ENST00000625883 BARGINQ6ZT62 677 aa8.89□□□□□ -0.99
CDR1-202ENST00000625883 ZNF710Q8N1W2 664 aa8.88□□□□□ -0.99
CDR1-202ENST00000625883 GRXCR2A6NFK2 248 aa8.87□□□□□ -0.99
CDR1-202ENST00000625883 GPR37O15354 613 aa8.87□□□□□ -0.99
CDR1-202ENST00000625883 PTGER2P43116 358 aa8.87□□□□□ -0.99
CDR1-202ENST00000625883 BRPF1P55201 1214 aaPredicted RBP8.87□□□□□ -0.99
CDR1-202ENST00000625883 PTCD2Q8WV60 388 aaKnown RBP8.87□□□□□ -0.99
CDR1-202ENST00000625883 EVI5O60447 810 aa8.85□□□□□ -0.99
CDR1-202ENST00000625883 SLC34A2O95436 690 aa8.85□□□□□ -0.99
CDR1-202ENST00000625883 OSBPP22059 807 aa8.85□□□□□ -0.99
CDR1-202ENST00000625883 ZSWIM6Q9HCJ5 1215 aa8.85□□□□□ -0.99
CDR1-202ENST00000625883 TBC1D12O60347 775 aa8.83□□□□□ -1
CDR1-202ENST00000625883 DDX12PQ92771 950 aa8.83□□□□□ -1
CDR1-202ENST00000625883 PRIM1P49642 420 aaKnown RBP8.82□□□□□ -1
CDR1-202ENST00000625883 FAM163AQ96GL9 167 aaPredicted RBP8.82□□□□□ -1
CDR1-202ENST00000625883 TMEM132AQ24JP5 1023 aa8.8□□□□□ -1
CDR1-202ENST00000625883 ANO8Q9HCE9 1232 aaPredicted RBP8.8□□□□□ -1
CDR1-202ENST00000625883 HOXB3P14651 431 aaPredicted RBP8.79□□□□□ -1
CDR1-202ENST00000625883 NEUROD2Q15784 382 aa8.79□□□□□ -1
CDR1-202ENST00000625883 AK7Q96M32 723 aa8.79□□□□□ -1
CDR1-202ENST00000625883 NUTM2FA1L443 756 aa8.78□□□□□ -1
CDR1-202ENST00000625883 ZNF316A6NFI3 1004 aaPredicted RBP8.78□□□□□ -1
CDR1-202ENST00000625883 KRI1Q8N9T8 703 aaKnown RBP8.77□□□□□ -1
CDR1-202ENST00000625883 PCDHGA4Q9Y5G9 962 aa8.77□□□□□ -1
CDR1-202ENST00000625883 KDM4FA0A1W2PPD8 638 aa8.76□□□□□ -1.01
CDR1-202ENST00000625883 ST18O60284 1047 aa8.75□□□□□ -1.01
CDR1-202ENST00000625883 HOXB1P14653 301 aaPredicted RBP8.75□□□□□ -1.01
CDR1-202ENST00000625883 TRIM66O15016 1216 aa8.74□□□□□ -1.01
CDR1-202ENST00000625883 FCHSD2O94868 740 aa8.73□□□□□ -1.01
CDR1-202ENST00000625883 PHF14O94880 888 aa8.73□□□□□ -1.01
CDR1-202ENST00000625883 GNPATO15228 680 aa8.72□□□□□ -1.01
CDR1-202ENST00000625883 FECHP22830 423 aa8.72□□□□□ -1.01
CDR1-202ENST00000625883 PTGDRQ13258 359 aa8.72□□□□□ -1.01
CDR1-202ENST00000625883 HIC1Q14526 733 aa8.72□□□□□ -1.01
CDR1-202ENST00000625883 PCDHGA10Q9Y5H3 936 aa8.72□□□□□ -1.01
CDR1-202ENST00000625883 EMP3P54852 163 aa8.71□□□□□ -1.01
CDR1-202ENST00000625883 EN1Q05925 392 aaPredicted RBP8.71□□□□□ -1.01
CDR1-202ENST00000625883 MAP2K5Q13163 448 aa8.71□□□□□ -1.01
CDR1-202ENST00000625883 GPR153Q6NV75 609 aa8.71□□□□□ -1.01
CDR1-202ENST00000625883 EPAS1Q99814 870 aa8.71□□□□□ -1.01
CDR1-202ENST00000625883 CDHR5Q9HBB8 845 aa8.71□□□□□ -1.01
CDR1-202ENST00000625883 GPBP1L1Q9HC44 474 aaPredicted RBP8.71□□□□□ -1.01
CDR1-202ENST00000625883 MINK1Q8N4C8 1332 aaPredicted RBP8.71□□□□□ -1.02
CDR1-202ENST00000625883 ARSIQ5FYB1 569 aa8.7□□□□□ -1.02
CDR1-202ENST00000625883 CCDC102AQ96A19 550 aa8.7□□□□□ -1.02
CDR1-202ENST00000625883 PSDA5PKW4 1024 aaPredicted RBP8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms