RNA–Protein interactions for RNA: ENST00000625275.2

R3HCC1-210, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene R3HCC1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-210ENST00000625275 ZFYVE16Q7Z3T8 1539 aa32.18■■■□□ 2.74
R3HCC1-210ENST00000625275 FYCO1Q9BQS8 1478 aa32.17■■■□□ 2.74
R3HCC1-210ENST00000625275 CDC42BPBQ9Y5S2 1711 aa32.17■■■□□ 2.74
R3HCC1-210ENST00000625275 POGZQ7Z3K3 1410 aa32.17■■■□□ 2.74
R3HCC1-210ENST00000625275 MADDQ8WXG6 1647 aa32.15■■■□□ 2.74
R3HCC1-210ENST00000625275 SCAPERQ9BY12 1400 aa32.15■■■□□ 2.74
R3HCC1-210ENST00000625275 ARHGAP5Q13017 1502 aa32.14■■■□□ 2.74
R3HCC1-210ENST00000625275 MAGI2Q86UL8 1455 aa32.14■■■□□ 2.74
R3HCC1-210ENST00000625275 PREX2Q70Z35 1606 aa32.13■■■□□ 2.73
R3HCC1-210ENST00000625275 SIGLEC1Q9BZZ2 1709 aa32.12■■■□□ 2.73
R3HCC1-210ENST00000625275 EFCAB2Q5VUJ9 269 aa32.1■■■□□ 2.73
R3HCC1-210ENST00000625275 ARID4BQ4LE39 1312 aaPredicted RBP32.1■■■□□ 2.73
R3HCC1-210ENST00000625275 YEATS2Q9ULM3 1422 aa32.1■■■□□ 2.73
R3HCC1-210ENST00000625275 PTPRMP28827 1452 aa32.09■■■□□ 2.73
R3HCC1-210ENST00000625275 CDC42BPAQ5VT25 1732 aa32.08■■■□□ 2.73
R3HCC1-210ENST00000625275 RIMS1Q86UR5 1692 aaKnown RBP32.08■■■□□ 2.73
R3HCC1-210ENST00000625275 KDM5CP41229 1560 aa32.02■■■□□ 2.72
R3HCC1-210ENST00000625275 ZNF518AQ6AHZ1 1483 aa32.02■■■□□ 2.72
R3HCC1-210ENST00000625275 ITSN2Q9NZM3 1697 aa32■■■□□ 2.71
R3HCC1-210ENST00000625275 FER1L4A9Z1Z3 1794 aa31.99■■■□□ 2.71
R3HCC1-210ENST00000625275 ABCC1P33527 1531 aa31.97■■■□□ 2.71
R3HCC1-210ENST00000625275 ATP10AO60312 1499 aa31.94■■■□□ 2.7
R3HCC1-210ENST00000625275 C9orf84Q5VXU9 1444 aa31.93■■■□□ 2.7
R3HCC1-210ENST00000625275 DIP2CQ9Y2E4 1556 aa31.89■■■□□ 2.7
R3HCC1-210ENST00000625275 CEP162Q5TB80 1403 aa31.88■■■□□ 2.69
R3HCC1-210ENST00000625275 ABCA6Q8N139 1617 aa31.88■■■□□ 2.69
R3HCC1-210ENST00000625275 ARHGEF12Q9NZN5 1544 aa31.86■■■□□ 2.69
R3HCC1-210ENST00000625275 AFAP1Q8N556 730 aa31.85■■■□□ 2.69
R3HCC1-210ENST00000625275 SAMD9LQ8IVG5 1584 aa31.85■■■□□ 2.69
R3HCC1-210ENST00000625275 REREQ9P2R6 1566 aa31.84■■■□□ 2.69
R3HCC1-210ENST00000625275 MLH3Q9UHC1 1453 aa31.83■■■□□ 2.69
R3HCC1-210ENST00000625275 TRAPPC8Q9Y2L5 1435 aa31.82■■■□□ 2.68
R3HCC1-210ENST00000625275 KIDINS220Q9ULH0 1771 aa31.82■■■□□ 2.68
R3HCC1-210ENST00000625275 GPATCH8Q9UKJ3 1502 aaKnown RBP31.81■■■□□ 2.68
R3HCC1-210ENST00000625275 MLECQ14165 292 aa31.79■■■□□ 2.68
R3HCC1-210ENST00000625275 LMTK3Q96Q04 1460 aa31.78■■■□□ 2.68
R3HCC1-210ENST00000625275 EHBP1L1Q8N3D4 1523 aa31.78■■■□□ 2.68
R3HCC1-210ENST00000625275 MTUS2Q5JR59 1369 aa31.77■■■□□ 2.68
R3HCC1-210ENST00000625275 SYCP2Q9BX26 1530 aa31.77■■■□□ 2.68
R3HCC1-210ENST00000625275 MYT1LQ9UL68 1186 aa31.76■■■□□ 2.67
R3HCC1-210ENST00000625275 TIAM1Q13009 1591 aa31.71■■■□□ 2.67
R3HCC1-210ENST00000625275 CCNB3Q8WWL7 1395 aa31.71■■■□□ 2.67
R3HCC1-210ENST00000625275 ZNF777Q9ULD5 760 aaPredicted RBP31.7■■■□□ 2.66
R3HCC1-210ENST00000625275 AGLP35573 1532 aa31.69■■■□□ 2.66
R3HCC1-210ENST00000625275 PLEKHH2Q8IVE3 1493 aa31.68■■■□□ 2.66
R3HCC1-210ENST00000625275 PLPPR3Q6T4P5 718 aa31.67■■■□□ 2.66
R3HCC1-210ENST00000625275 PREX1Q8TCU6 1659 aa31.66■■■□□ 2.66
R3HCC1-210ENST00000625275 KIAA1107Q9UPP5 1409 aa31.65■■■□□ 2.66
R3HCC1-210ENST00000625275 INO80Q9ULG1 1556 aaPredicted RBP31.64■■■□□ 2.66
R3HCC1-210ENST00000625275 SUPT6HQ7KZ85 1726 aaKnown RBP31.64■■■□□ 2.66
R3HCC1-210ENST00000625275 CFDP1Q9UEE9 299 aaPredicted RBP31.64■■■□□ 2.66
R3HCC1-210ENST00000625275 ATP7AQ04656 1500 aa31.62■■■□□ 2.65
R3HCC1-210ENST00000625275 SETD1BQ9UPS6 1966 aaKnown RBP31.61■■■□□ 2.65
R3HCC1-210ENST00000625275 C3P01024 1663 aa31.6■■■□□ 2.65
R3HCC1-210ENST00000625275 HNRNPMP52272 730 aaKnown RBP eCLIP31.58■■■□□ 2.65
R3HCC1-210ENST00000625275 SPAG9O60271 1321 aaKnown RBP31.57■■■□□ 2.64
R3HCC1-210ENST00000625275 VPS8Q8N3P4 1428 aa31.55■■■□□ 2.64
R3HCC1-210ENST00000625275 ADGBQ8N7X0 1667 aa31.54■■■□□ 2.64
R3HCC1-210ENST00000625275 PLXNC1O60486 1568 aa31.53■■■□□ 2.64
R3HCC1-210ENST00000625275 ILDR1Q86SU0 546 aaPredicted RBP31.52■■■□□ 2.64
R3HCC1-210ENST00000625275 NCOA2Q15596 1464 aa31.52■■■□□ 2.64
R3HCC1-210ENST00000625275 HSPA2P54652 639 aa31.51■■■□□ 2.63
R3HCC1-210ENST00000625275 MROH2AA6NES4 1674 aa31.5■■■□□ 2.63
R3HCC1-210ENST00000625275 CEBPAP49715 358 aaPredicted RBP31.5■■■□□ 2.63
R3HCC1-210ENST00000625275 MBD5Q9P267 1494 aa31.46■■■□□ 2.63
R3HCC1-210ENST00000625275 ZNF644Q9H582 1327 aaPredicted RBP31.46■■■□□ 2.63
R3HCC1-210ENST00000625275 CNTLNQ9NXG0 1405 aa31.45■■■□□ 2.63
R3HCC1-210ENST00000625275 A2MP01023 1474 aa31.45■■■□□ 2.63
R3HCC1-210ENST00000625275 ESF1Q9H501 851 aaKnown RBP31.44■■■□□ 2.62
R3HCC1-210ENST00000625275 CAMSAP2Q08AD1 1489 aa31.43■■■□□ 2.62
R3HCC1-210ENST00000625275 LRRC9Q6ZRR7 1453 aa31.41■■■□□ 2.62
R3HCC1-210ENST00000625275 CLTCQ00610 1675 aaKnown RBP31.41■■■□□ 2.62
R3HCC1-210ENST00000625275 UHRF1BP1Q6BDS2 1440 aa31.41■■■□□ 2.62
R3HCC1-210ENST00000625275 MAP3K1Q13233 1512 aa31.39■■■□□ 2.62
R3HCC1-210ENST00000625275 CCDC141Q6ZP82 1450 aa31.37■■■□□ 2.61
R3HCC1-210ENST00000625275 STRCQ7RTU9 1775 aa31.37■■■□□ 2.61
R3HCC1-210ENST00000625275 RTEL1-TNFRSF6BF6WH68 1400 aa31.36■■■□□ 2.61
R3HCC1-210ENST00000625275 ARHGEF5Q12774 1597 aa31.34■■■□□ 2.61
R3HCC1-210ENST00000625275 NPATQ14207 1427 aa31.28■■■□□ 2.6
R3HCC1-210ENST00000625275 ZMYM3Q14202 1370 aa31.25■■■□□ 2.59
R3HCC1-210ENST00000625275 RSPH4AQ5TD94 716 aa31.24■■■□□ 2.59
R3HCC1-210ENST00000625275 ZNF142P52746 1687 aaPredicted RBP31.22■■■□□ 2.59
R3HCC1-210ENST00000625275 DHX29Q7Z478 1369 aaKnown RBP31.22■■■□□ 2.59
R3HCC1-210ENST00000625275 MYO3AQ8NEV4 1616 aa31.22■■■□□ 2.59
R3HCC1-210ENST00000625275 KANK4Q5T7N3 995 aaPredicted RBP31.21■■■□□ 2.59
R3HCC1-210ENST00000625275 GGT6Q6P531 493 aa31.21■■■□□ 2.59
R3HCC1-210ENST00000625275 FBXO41Q8TF61 875 aa31.21■■■□□ 2.59
R3HCC1-210ENST00000625275 MAST1Q9Y2H9 1570 aa31.2■■■□□ 2.58
R3HCC1-210ENST00000625275 MYOM3Q5VTT5 1437 aa31.19■■■□□ 2.58
R3HCC1-210ENST00000625275 PPP6R1Q9UPN7 881 aa31.17■■■□□ 2.58
R3HCC1-210ENST00000625275 FAM135AQ9P2D6 1515 aa31.16■■■□□ 2.58
R3HCC1-210ENST00000625275 MIA2Q96PC5 1412 aa31.16■■■□□ 2.58
R3HCC1-210ENST00000625275 PTPRKQ15262 1439 aa31.15■■■□□ 2.58
R3HCC1-210ENST00000625275 DMRT2Q9Y5R5 561 aa31.13■■■□□ 2.57
R3HCC1-210ENST00000625275 KDM5DQ9BY66 1539 aa31.12■■■□□ 2.57
R3HCC1-210ENST00000625275 CEP170BQ9Y4F5 1589 aaPredicted RBP31.11■■■□□ 2.57
R3HCC1-210ENST00000625275 CAMSAP1Q5T5Y3 1602 aa31.11■■■□□ 2.57
R3HCC1-210ENST00000625275 TSPY4P0CV99 314 aa31.11■■■□□ 2.57
R3HCC1-210ENST00000625275 TSPY10P0CW01 314 aa31.11■■■□□ 2.57
R3HCC1-210ENST00000625275 CROCC2H7BZ55 1655 aa31.11■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms