RNA–Protein interactions for RNA: ENST00000625151.1

LINC00552-201, long intergenic non-protein coding RNA 552, humanhuman

BASIC

Gene LINC00552, Length 2,579 nt, Biotype TEC.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00552-201ENST00000625151 NEFLP07196 543 aa21.3■■□□□ 1
LINC00552-201ENST00000625151 ARID3CA6NKF2 412 aa21.29■■□□□ 1
LINC00552-201ENST00000625151 MIA2Q96PC5 1412 aa21.28■■□□□ 1
LINC00552-201ENST00000625151 HSPA5P11021 654 aaKnown RBP21.28■■□□□ 1
LINC00552-201ENST00000625151 WASHC2AQ641Q2 1341 aa21.27■■□□□ 1
LINC00552-201ENST00000625151 PRG4Q92954 1404 aaPredicted RBP21.24■□□□□ 0.99
LINC00552-201ENST00000625151 MPHOSPH9Q99550 1183 aa21.24■□□□□ 0.99
LINC00552-201ENST00000625151 CARMIL2Q6F5E8 1435 aa21.21■□□□□ 0.99
LINC00552-201ENST00000625151 FOXD1Q16676 465 aa21.21■□□□□ 0.99
LINC00552-201ENST00000625151 ERCC6L2Q5T890 1561 aa21.2■□□□□ 0.98
LINC00552-201ENST00000625151 PLB1Q6P1J6 1458 aa21.2■□□□□ 0.98
LINC00552-201ENST00000625151 EIF4G2P78344 907 aaKnown RBP eCLIP21.19■□□□□ 0.98
LINC00552-201ENST00000625151 L3MBTL2Q969R5 705 aa21.19■□□□□ 0.98
LINC00552-201ENST00000625151 HNRNPUQ00839 825 aaKnown RBP eCLIP21.18■□□□□ 0.98
LINC00552-201ENST00000625151 DAPK1P53355 1430 aa21.18■□□□□ 0.98
LINC00552-201ENST00000625151 CLASP1Q7Z460 1538 aa21.17■□□□□ 0.98
LINC00552-201ENST00000625151 SHROOM2Q13796 1616 aa21.17■□□□□ 0.98
LINC00552-201ENST00000625151 DNMT1P26358 1616 aaKnown RBP21.17■□□□□ 0.98
LINC00552-201ENST00000625151 NUP153P49790 1475 aaKnown RBP21.16■□□□□ 0.98
LINC00552-201ENST00000625151 CNTLNQ9NXG0 1405 aa21.15■□□□□ 0.98
LINC00552-201ENST00000625151 RAPGEF6Q8TEU7 1601 aa21.14■□□□□ 0.98
LINC00552-201ENST00000625151 ROCK1Q13464 1354 aa21.14■□□□□ 0.97
LINC00552-201ENST00000625151 ABCC5O15440 1437 aa21.13■□□□□ 0.97
LINC00552-201ENST00000625151 ANKRD30BQ9BXX2 1392 aa21.13■□□□□ 0.97
LINC00552-201ENST00000625151 RPRD2Q5VT52 1461 aaKnown RBP21.13■□□□□ 0.97
LINC00552-201ENST00000625151 C11orf95C9JLR9 678 aaPredicted RBP21.12■□□□□ 0.97
LINC00552-201ENST00000625151 NCOA1Q15788 1441 aa21.11■□□□□ 0.97
LINC00552-201ENST00000625151 ZNF644Q9H582 1327 aaPredicted RBP21.11■□□□□ 0.97
LINC00552-201ENST00000625151 TEX14Q8IWB6 1497 aa21.11■□□□□ 0.97
LINC00552-201ENST00000625151 ANP32EQ9BTT0 268 aa21.11■□□□□ 0.97
LINC00552-201ENST00000625151 CCDC184Q52MB2 194 aa21.09■□□□□ 0.97
LINC00552-201ENST00000625151 CCDC7Q96M83 1385 aa21.09■□□□□ 0.97
LINC00552-201ENST00000625151 NBPF8Q3BBV2 869 aa21.09■□□□□ 0.97
LINC00552-201ENST00000625151 PTPRGP23470 1445 aa21.08■□□□□ 0.97
LINC00552-201ENST00000625151 RBM19Q9Y4C8 960 aaKnown RBP21.08■□□□□ 0.97
LINC00552-201ENST00000625151 POLR1AO95602 1720 aaPredicted RBP21.06■□□□□ 0.96
LINC00552-201ENST00000625151 ABCA8O94911 1581 aa21.06■□□□□ 0.96
LINC00552-201ENST00000625151 IRX6P78412 446 aaPredicted RBP21.04■□□□□ 0.96
LINC00552-201ENST00000625151 SLC4A1APQ9BWU0 796 aaKnown RBP21.03■□□□□ 0.96
LINC00552-201ENST00000625151 PRKRIP1Q9H875 184 aaPredicted RBP21.03■□□□□ 0.96
LINC00552-201ENST00000625151 SPATA31E1Q6ZUB1 1445 aa21.02■□□□□ 0.96
LINC00552-201ENST00000625151 OSCARQ8IYS5 282 aa21.01■□□□□ 0.95
LINC00552-201ENST00000625151 PZPP20742 1482 aa21■□□□□ 0.95
LINC00552-201ENST00000625151 CAMSAP2Q08AD1 1489 aa20.99■□□□□ 0.95
LINC00552-201ENST00000625151 ADGBQ8N7X0 1667 aa20.99■□□□□ 0.95
LINC00552-201ENST00000625151 CDK11AQ9UQ88 783 aaPredicted RBP20.98■□□□□ 0.95
LINC00552-201ENST00000625151 KIF7Q2M1P5 1343 aa20.98■□□□□ 0.95
LINC00552-201ENST00000625151 ATP10BO94823 1461 aa20.98■□□□□ 0.95
LINC00552-201ENST00000625151 ITSN2Q9NZM3 1697 aa20.98■□□□□ 0.95
LINC00552-201ENST00000625151 TROQ12816 1431 aaPredicted RBP20.97■□□□□ 0.95
LINC00552-201ENST00000625151 FAM9BQ8IZU0 186 aa20.96■□□□□ 0.95
LINC00552-201ENST00000625151 MRS2Q9HD23 443 aa20.95■□□□□ 0.95
LINC00552-201ENST00000625151 KIF14Q15058 1648 aa20.95■□□□□ 0.94
LINC00552-201ENST00000625151 CROCC2H7BZ55 1655 aa20.94■□□□□ 0.94
LINC00552-201ENST00000625151 GPATCH8Q9UKJ3 1502 aaKnown RBP20.93■□□□□ 0.94
LINC00552-201ENST00000625151 CFDP1Q9UEE9 299 aaPredicted RBP20.92■□□□□ 0.94
LINC00552-201ENST00000625151 ADCY10Q96PN6 1610 aa20.92■□□□□ 0.94
LINC00552-201ENST00000625151 MBD5Q9P267 1494 aa20.92■□□□□ 0.94
LINC00552-201ENST00000625151 BCL11AQ9H165 835 aa20.92■□□□□ 0.94
LINC00552-201ENST00000625151 ZBED9Q6R2W3 1325 aa20.9■□□□□ 0.94
LINC00552-201ENST00000625151 ADGRL2O95490 1459 aa20.9■□□□□ 0.94
LINC00552-201ENST00000625151 BCORL1Q5H9F3 1711 aa20.89■□□□□ 0.93
LINC00552-201ENST00000625151 KIAA1107Q9UPP5 1409 aa20.88■□□□□ 0.93
LINC00552-201ENST00000625151 ZNF777Q9ULD5 760 aaPredicted RBP20.88■□□□□ 0.93
LINC00552-201ENST00000625151 ERICH6BQ5W0A0 696 aa20.87■□□□□ 0.93
LINC00552-201ENST00000625151 ABCC2Q92887 1545 aa20.86■□□□□ 0.93
LINC00552-201ENST00000625151 PLEKHD1A6NEE1 506 aa20.85■□□□□ 0.93
LINC00552-201ENST00000625151 PPP4R2Q9NY27 417 aa20.84■□□□□ 0.93
LINC00552-201ENST00000625151 DHX29Q7Z478 1369 aaKnown RBP20.84■□□□□ 0.93
LINC00552-201ENST00000625151 USP47Q96K76 1375 aa20.84■□□□□ 0.93
LINC00552-201ENST00000625151 PKD2Q13563 968 aa20.83■□□□□ 0.93
LINC00552-201ENST00000625151 KDM5CP41229 1560 aa20.83■□□□□ 0.92
LINC00552-201ENST00000625151 CDC42BPAQ5VT25 1732 aa20.82■□□□□ 0.92
LINC00552-201ENST00000625151 ZNF326Q5BKZ1 582 aaKnown RBP20.82■□□□□ 0.92
LINC00552-201ENST00000625151 ANKRD30AQ9BXX3 1397 aa20.82■□□□□ 0.92
LINC00552-201ENST00000625151 MSH5O43196 834 aa20.82■□□□□ 0.92
LINC00552-201ENST00000625151 ANKRD50Q9ULJ7 1429 aa20.8■□□□□ 0.92
LINC00552-201ENST00000625151 CNGB1Q14028 1251 aaPredicted RBP20.77■□□□□ 0.92
LINC00552-201ENST00000625151 POLR3GLQ9BT43 218 aa20.77■□□□□ 0.92
LINC00552-201ENST00000625151 UHRF1BP1LA0JNW5 1464 aa20.77■□□□□ 0.91
LINC00552-201ENST00000625151 FANCIQ9NVI1 1328 aa20.75■□□□□ 0.91
LINC00552-201ENST00000625151 ZCCHC11Q5TAX3 1644 aaKnown RBP20.75■□□□□ 0.91
LINC00552-201ENST00000625151 ABCC10Q5T3U5 1492 aa20.75■□□□□ 0.91
LINC00552-201ENST00000625151 B4GALNT3Q6L9W6 998 aa20.74■□□□□ 0.91
LINC00552-201ENST00000625151 C9orf84Q5VXU9 1444 aa20.73■□□□□ 0.91
LINC00552-201ENST00000625151 UHRF1BP1Q6BDS2 1440 aa20.73■□□□□ 0.91
LINC00552-201ENST00000625151 SHANK2Q9UPX8 1470 aa20.73■□□□□ 0.91
LINC00552-201ENST00000625151 RALGAPBQ86X10 1494 aa20.73■□□□□ 0.91
LINC00552-201ENST00000625151 NUP155O75694 1391 aa20.73■□□□□ 0.91
LINC00552-201ENST00000625151 PRKCSHP14314 528 aaPredicted RBP20.71■□□□□ 0.91
LINC00552-201ENST00000625151 SMG6Q86US8 1419 aaKnown RBP20.7■□□□□ 0.9
LINC00552-201ENST00000625151 ARID4BQ4LE39 1312 aaPredicted RBP20.7■□□□□ 0.9
LINC00552-201ENST00000625151 KDM5DQ9BY66 1539 aa20.69■□□□□ 0.9
LINC00552-201ENST00000625151 ARHGEF12Q9NZN5 1544 aa20.69■□□□□ 0.9
LINC00552-201ENST00000625151 CARD11Q9BXL7 1154 aa20.66■□□□□ 0.9
LINC00552-201ENST00000625151 TTC37Q6PGP7 1564 aa20.65■□□□□ 0.9
LINC00552-201ENST00000625151 ROCK2O75116 1388 aaKnown RBP20.65■□□□□ 0.9
LINC00552-201ENST00000625151 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.64■□□□□ 0.9
LINC00552-201ENST00000625151 NUDCQ9Y266 331 aa20.64■□□□□ 0.9
LINC00552-201ENST00000625151 KIF15Q9NS87 1388 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms