RNA–Protein interactions for RNA: ENST00000624166.3

ATRX-214, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 4,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-214ENST00000624166 DCAF11Q8TEB1 546 aa15.27■□□□□ 0.04
ATRX-214ENST00000624166 IGF1RP08069 1367 aa15.27■□□□□ 0.04
ATRX-214ENST00000624166 KIF15Q9NS87 1388 aa15.27■□□□□ 0.04
ATRX-214ENST00000624166 GSE1Q14687 1217 aa15.27■□□□□ 0.04
ATRX-214ENST00000624166 TMF1P82094 1093 aa15.27■□□□□ 0.03
ATRX-214ENST00000624166 PKD2Q13563 968 aa15.27■□□□□ 0.03
ATRX-214ENST00000624166 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.26■□□□□ 0.03
ATRX-214ENST00000624166 MYBBP1AQ9BQG0 1328 aaKnown RBP15.25■□□□□ 0.03
ATRX-214ENST00000624166 ARID4BQ4LE39 1312 aaPredicted RBP15.23■□□□□ 0.03
ATRX-214ENST00000624166 EXOC6Q8TAG9 804 aa15.23■□□□□ 0.03
ATRX-214ENST00000624166 RSPH6AQ9H0K4 717 aa15.21■□□□□ 0.03
ATRX-214ENST00000624166 BICRAQ9NZM4 1560 aa15.21■□□□□ 0.03
ATRX-214ENST00000624166 TOP2BQ02880 1626 aa15.21■□□□□ 0.02
ATRX-214ENST00000624166 SLC24A1O60721 1099 aa15.2■□□□□ 0.02
ATRX-214ENST00000624166 EIF4G1Q04637 1599 aaKnown RBP15.2■□□□□ 0.02
ATRX-214ENST00000624166 KIF7Q2M1P5 1343 aa15.2■□□□□ 0.02
ATRX-214ENST00000624166 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.2■□□□□ 0.02
ATRX-214ENST00000624166 CADPSQ9ULU8 1353 aa15.19■□□□□ 0.02
ATRX-214ENST00000624166 CUX1P39880 1505 aa15.19■□□□□ 0.02
ATRX-214ENST00000624166 CENPQQ7L2Z9 268 aaPredicted RBP15.19■□□□□ 0.02
ATRX-214ENST00000624166 TIAM1Q13009 1591 aa15.19■□□□□ 0.02
ATRX-214ENST00000624166 PAK3O75914 559 aaPredicted RBP15.19■□□□□ 0.02
ATRX-214ENST00000624166 MYOM3Q5VTT5 1437 aa15.19■□□□□ 0.02
ATRX-214ENST00000624166 FAM161AQ3B820 660 aa15.18■□□□□ 0.02
ATRX-214ENST00000624166 CFAP53Q96M91 514 aa15.18■□□□□ 0.02
ATRX-214ENST00000624166 CASKIN1Q8WXD9 1431 aa15.18■□□□□ 0.02
ATRX-214ENST00000624166 CHMP7Q8WUX9 453 aaPredicted RBP15.17■□□□□ 0.02
ATRX-214ENST00000624166 USP47Q96K76 1375 aa15.17■□□□□ 0.02
ATRX-214ENST00000624166 FTSJ3Q8IY81 847 aaKnown RBP15.17■□□□□ 0.02
ATRX-214ENST00000624166 FRAT1Q92837 279 aaPredicted RBP15.17■□□□□ 0.02
ATRX-214ENST00000624166 PNNQ9H307 717 aaKnown RBP15.17■□□□□ 0.02
ATRX-214ENST00000624166 ANKRD30AQ9BXX3 1397 aa15.16■□□□□ 0.02
ATRX-214ENST00000624166 MYH16Q9H6N6 1097 aa15.15■□□□□ 0.02
ATRX-214ENST00000624166 HFM1A2PYH4 1435 aa15.15■□□□□ 0.02
ATRX-214ENST00000624166 SMG6Q86US8 1419 aaKnown RBP15.15■□□□□ 0.02
ATRX-214ENST00000624166 GOLGA2Q08379 1002 aa15.14■□□□□ 0.02
ATRX-214ENST00000624166 FYCO1Q9BQS8 1478 aa15.14■□□□□ 0.01
ATRX-214ENST00000624166 CHGAP10645 457 aaKnown RBP15.14■□□□□ 0.01
ATRX-214ENST00000624166 HSCBQ8IWL3 235 aa15.14■□□□□ 0.01
ATRX-214ENST00000624166 MAP3K1Q13233 1512 aa15.14■□□□□ 0.01
ATRX-214ENST00000624166 NUP155O75694 1391 aa15.14■□□□□ 0.01
ATRX-214ENST00000624166 SLKQ9H2G2 1235 aaPredicted RBP15.12■□□□□ 0.01
ATRX-214ENST00000624166 GOLGA6L3A6NEY3 463 aa15.11■□□□□ 0.01
ATRX-214ENST00000624166 ST20-MTHFSA0A0A6YYL1 179 aa15.11■□□□□ 0.01
ATRX-214ENST00000624166 CRBNQ96SW2 442 aa15.11■□□□□ 0.01
ATRX-214ENST00000624166 BRD4O60885 1362 aaPredicted RBP15.09■□□□□ 0.01
ATRX-214ENST00000624166 HSP90AB1P08238 724 aaKnown RBP15.09■□□□□ 0.01
ATRX-214ENST00000624166 PTMSP20962 102 aa15.09■□□□□ 0.01
ATRX-214ENST00000624166 NEUROD2Q15784 382 aa15.09■□□□□ 0.01
ATRX-214ENST00000624166 NFKBIBQ15653 356 aa15.09■□□□□ 0.01
ATRX-214ENST00000624166 PMFBP1Q8TBY8 1022 aa15.09■□□□□ 0.01
ATRX-214ENST00000624166 TDRD9Q8NDG6 1382 aaKnown RBP15.08■□□□□ 0.01
ATRX-214ENST00000624166 CHMP4BQ9H444 224 aaKnown RBP15.08■□□□□ 0
ATRX-214ENST00000624166 AKNAQ7Z591 1439 aa15.07■□□□□ 0
ATRX-214ENST00000624166 NCOA2Q15596 1464 aa15.07■□□□□ 0
ATRX-214ENST00000624166 FGD5Q6ZNL6 1462 aa15.07■□□□□ 0
ATRX-214ENST00000624166 SLC4A3P48751 1232 aa15.07■□□□□ 0
ATRX-214ENST00000624166 RWDD1Q9H446 243 aaPredicted RBP15.07■□□□□ 0
ATRX-214ENST00000624166 PLIN1O60240 522 aa15.07■□□□□ 0
ATRX-214ENST00000624166 NCLP19338 710 aaKnown RBP15.07■□□□□ 0
ATRX-214ENST00000624166 UNC13AQ9UPW8 1703 aa15.07■□□□□ 0
ATRX-214ENST00000624166 MAPK8IP3Q9UPT6 1336 aa15.07■□□□□ 0
ATRX-214ENST00000624166 CCDC184Q52MB2 194 aa15.06■□□□□ 0
ATRX-214ENST00000624166 BACH2Q9BYV9 841 aa15.06■□□□□ 0
ATRX-214ENST00000624166 ANO8Q9HCE9 1232 aaPredicted RBP15.06■□□□□ 0
ATRX-214ENST00000624166 GBP4Q96PP9 640 aa15.05■□□□□ -0
ATRX-214ENST00000624166 IL27Q8NEV9 243 aa15.05■□□□□ -0
ATRX-214ENST00000624166 EFCAB5A4FU69 1503 aa15.05■□□□□ -0
ATRX-214ENST00000624166 MAPKBP1O60336 1514 aa15.04■□□□□ -0
ATRX-214ENST00000624166 TNNT2P45379 298 aaPredicted RBP15.04■□□□□ -0
ATRX-214ENST00000624166 NCAPD3P42695 1498 aa15.04■□□□□ -0
ATRX-214ENST00000624166 MSNP26038 577 aaKnown RBP15.03■□□□□ -0
ATRX-214ENST00000624166 PNISRQ8TF01 805 aaKnown RBP15.02■□□□□ -0
ATRX-214ENST00000624166 MIA2Q96PC5 1412 aa15.02■□□□□ -0
ATRX-214ENST00000624166 PTMAP06454 111 aaKnown RBP15.02□□□□□ -0.01
ATRX-214ENST00000624166 SPRYD3Q8NCJ5 442 aa15.02□□□□□ -0.01
ATRX-214ENST00000624166 GZF1Q9H116 711 aaPredicted RBP15.02□□□□□ -0.01
ATRX-214ENST00000624166 DNAJC5BQ9UF47 199 aa15.02□□□□□ -0.01
ATRX-214ENST00000624166 CGNL1Q0VF96 1302 aa15.01□□□□□ -0.01
ATRX-214ENST00000624166 CASC1Q6TDU7 716 aa15.01□□□□□ -0.01
ATRX-214ENST00000624166 NAIPQ13075 1403 aa15□□□□□ -0.01
ATRX-214ENST00000624166 PRKCSHP14314 528 aaPredicted RBP15□□□□□ -0.01
ATRX-214ENST00000624166 CFAP44Q96MT7 982 aa15□□□□□ -0.01
ATRX-214ENST00000624166 CENPJQ9HC77 1338 aaPredicted RBP15□□□□□ -0.01
ATRX-214ENST00000624166 PANK3Q9H999 370 aa14.99□□□□□ -0.01
ATRX-214ENST00000624166 CFTRP13569 1480 aa14.99□□□□□ -0.01
ATRX-214ENST00000624166 HSP90AA2PQ14568 343 aaPredicted RBP14.98□□□□□ -0.01
ATRX-214ENST00000624166 NBPF8Q3BBV2 869 aa14.98□□□□□ -0.01
ATRX-214ENST00000624166 NGEFQ8N5V2 710 aa14.98□□□□□ -0.01
ATRX-214ENST00000624166 FANCD2Q9BXW9 1451 aa14.97□□□□□ -0.01
ATRX-214ENST00000624166 DDX11L8A8MPP1 907 aa14.97□□□□□ -0.01
ATRX-214ENST00000624166 DNTTIP2Q5QJE6 756 aaKnown RBP14.97□□□□□ -0.01
ATRX-214ENST00000624166 MORC1Q86VD1 984 aa14.97□□□□□ -0.01
ATRX-214ENST00000624166 E9PSI1 815 aa14.96□□□□□ -0.01
ATRX-214ENST00000624166 BRPF3Q9ULD4 1205 aa14.96□□□□□ -0.01
ATRX-214ENST00000624166 RSPH4AQ5TD94 716 aa14.96□□□□□ -0.02
ATRX-214ENST00000624166 EIF3AQ14152 1382 aaKnown RBP14.96□□□□□ -0.02
ATRX-214ENST00000624166 PDS5BQ9NTI5 1447 aa14.95□□□□□ -0.02
ATRX-214ENST00000624166 ERCC6Q03468 1493 aa14.95□□□□□ -0.02
ATRX-214ENST00000624166 FAM43AQ8N2R8 423 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms