RNA–Protein interactions for RNA: ENST00000624069.3

RPL13A-214, Transcript of ribosomal protein L13a, humanhuman

TSL 1 (best)

Gene RPL13A, Length 1,122 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13A-214ENST00000624069 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.47■■□□□ 1.511e-44■□□□□ 9.7
RPL13A-214ENST00000624069 DMRT2Q9Y5R5 561 aa24.47■■□□□ 1.51
RPL13A-214ENST00000624069 CEBPAP49715 358 aaPredicted RBP24.46■■□□□ 1.51
RPL13A-214ENST00000624069 TTC37Q6PGP7 1564 aa24.45■■□□□ 1.5
RPL13A-214ENST00000624069 RANGAP1P46060 587 aaPredicted RBP24.43■■□□□ 1.5
RPL13A-214ENST00000624069 SCAPERQ9BY12 1400 aa24.43■■□□□ 1.5
RPL13A-214ENST00000624069 CFAP74Q9C0B2 1584 aa24.42■■□□□ 1.5
RPL13A-214ENST00000624069 HECW1Q76N89 1606 aa24.42■■□□□ 1.5
RPL13A-214ENST00000624069 ARHGEF12Q9NZN5 1544 aa24.4■■□□□ 1.5
RPL13A-214ENST00000624069 ATP10AO60312 1499 aa24.39■■□□□ 1.5
RPL13A-214ENST00000624069 PLCH2O75038 1416 aa24.37■■□□□ 1.49
RPL13A-214ENST00000624069 FER1L4A9Z1Z3 1794 aa24.37■■□□□ 1.49
RPL13A-214ENST00000624069 C9orf84Q5VXU9 1444 aa24.35■■□□□ 1.49
RPL13A-214ENST00000624069 PREX1Q8TCU6 1659 aa24.32■■□□□ 1.48
RPL13A-214ENST00000624069 STRCQ7RTU9 1775 aa24.31■■□□□ 1.48
RPL13A-214ENST00000624069 EFCAB2Q5VUJ9 269 aa24.31■■□□□ 1.48
RPL13A-214ENST00000624069 UHRF1BP1Q6BDS2 1440 aa24.31■■□□□ 1.48
RPL13A-214ENST00000624069 PTPRTO14522 1441 aa24.29■■□□□ 1.48
RPL13A-214ENST00000624069 ARHGAP35Q9NRY4 1499 aa24.27■■□□□ 1.48
RPL13A-214ENST00000624069 SPATA31D1Q6ZQQ2 1576 aa24.26■■□□□ 1.47
RPL13A-214ENST00000624069 CDK13Q14004 1512 aaKnown RBP24.25■■□□□ 1.47
RPL13A-214ENST00000624069 AFAP1Q8N556 730 aa24.24■■□□□ 1.47
RPL13A-214ENST00000624069 CLIP1P30622 1438 aa24.21■■□□□ 1.47
RPL13A-214ENST00000624069 SETD1BQ9UPS6 1966 aaKnown RBP24.21■■□□□ 1.47
RPL13A-214ENST00000624069 LTBP4Q8N2S1 1624 aa24.21■■□□□ 1.47
RPL13A-214ENST00000624069 ZNF518AQ6AHZ1 1483 aa24.18■■□□□ 1.46
RPL13A-214ENST00000624069 LOC105371045A0A1W2PR82 267 aa24.17■■□□□ 1.46
RPL13A-214ENST00000624069 IQSEC2Q5JU85 1478 aa24.16■■□□□ 1.46
RPL13A-214ENST00000624069 MYT1LQ9UL68 1186 aa24.16■■□□□ 1.46
RPL13A-214ENST00000624069 FMN1Q68DA7 1419 aa24.16■■□□□ 1.46
RPL13A-214ENST00000624069 CEP162Q5TB80 1403 aa24.15■■□□□ 1.46
RPL13A-214ENST00000624069 TRAPPC8Q9Y2L5 1435 aa24.15■■□□□ 1.46
RPL13A-214ENST00000624069 ATP1B4Q9UN42 357 aaPredicted RBP24.13■■□□□ 1.45
RPL13A-214ENST00000624069 CDK11AQ9UQ88 783 aaPredicted RBP24.13■■□□□ 1.45
RPL13A-214ENST00000624069 KDM5CP41229 1560 aa24.12■■□□□ 1.45
RPL13A-214ENST00000624069 NCOA1Q15788 1441 aa24.11■■□□□ 1.45
RPL13A-214ENST00000624069 ESF1Q9H501 851 aaKnown RBP24.11■■□□□ 1.45
RPL13A-214ENST00000624069 DIP2CQ9Y2E4 1556 aa24.09■■□□□ 1.45
RPL13A-214ENST00000624069 REREQ9P2R6 1566 aa24.08■■□□□ 1.45
RPL13A-214ENST00000624069 MLH3Q9UHC1 1453 aa24.08■■□□□ 1.45
RPL13A-214ENST00000624069 AGLP35573 1532 aa24.06■■□□□ 1.44
RPL13A-214ENST00000624069 MYO5CQ9NQX4 1742 aa24.06■■□□□ 1.44
RPL13A-214ENST00000624069 C3P01024 1663 aa24.05■■□□□ 1.44
RPL13A-214ENST00000624069 ARHGAP5Q13017 1502 aa24.05■■□□□ 1.44
RPL13A-214ENST00000624069 TROQ12816 1431 aaPredicted RBP24.04■■□□□ 1.44
RPL13A-214ENST00000624069 UBAP1LF5GYI3 381 aa24.03■■□□□ 1.44
RPL13A-214ENST00000624069 KIF14Q15058 1648 aa24.02■■□□□ 1.44
RPL13A-214ENST00000624069 ZNF335Q9H4Z2 1342 aaPredicted RBP24.02■■□□□ 1.44
RPL13A-214ENST00000624069 NCKAP5LQ9HCH0 1330 aa24.01■■□□□ 1.43
RPL13A-214ENST00000624069 CNTLNQ9NXG0 1405 aa24.01■■□□□ 1.43
RPL13A-214ENST00000624069 ABCA6Q8N139 1617 aa23.99■■□□□ 1.43
RPL13A-214ENST00000624069 CASKIN1Q8WXD9 1431 aa23.97■■□□□ 1.43
RPL13A-214ENST00000624069 CAMSAP1Q5T5Y3 1602 aa23.96■■□□□ 1.43
RPL13A-214ENST00000624069 FYCO1Q9BQS8 1478 aa23.96■■□□□ 1.43
RPL13A-214ENST00000624069 NPATQ14207 1427 aa23.96■■□□□ 1.43
RPL13A-214ENST00000624069 ZMYM3Q14202 1370 aa23.95■■□□□ 1.42
RPL13A-214ENST00000624069 PKD2Q13563 968 aa23.92■■□□□ 1.42
RPL13A-214ENST00000624069 CCDC18Q5T9S5 1454 aa23.89■■□□□ 1.42
RPL13A-214ENST00000624069 ABCC1P33527 1531 aa23.89■■□□□ 1.41
RPL13A-214ENST00000624069 LRRIQ1Q96JM4 1722 aa23.87■■□□□ 1.41
RPL13A-214ENST00000624069 CDC42BPBQ9Y5S2 1711 aa23.87■■□□□ 1.41
RPL13A-214ENST00000624069 KIDINS220Q9ULH0 1771 aa23.86■■□□□ 1.41
RPL13A-214ENST00000624069 PLA2R1Q13018 1463 aa23.85■■□□□ 1.41
RPL13A-214ENST00000624069 VPS8Q8N3P4 1428 aa23.84■■□□□ 1.41
RPL13A-214ENST00000624069 HSPA1LP34931 641 aa23.84■■□□□ 1.41
RPL13A-214ENST00000624069 TCOF1Q13428 1488 aaKnown RBP23.83■■□□□ 1.41
RPL13A-214ENST00000624069 PPP6R1Q9UPN7 881 aa23.83■■□□□ 1.41
RPL13A-214ENST00000624069 PREX2Q70Z35 1606 aa23.81■■□□□ 1.4
RPL13A-214ENST00000624069 MROH2AA6NES4 1674 aa23.8■■□□□ 1.4
RPL13A-214ENST00000624069 PTPRKQ15262 1439 aa23.8■■□□□ 1.4
RPL13A-214ENST00000624069 SPAG9O60271 1321 aaKnown RBP23.8■■□□□ 1.4
RPL13A-214ENST00000624069 ITSN2Q9NZM3 1697 aa23.79■■□□□ 1.4
RPL13A-214ENST00000624069 ZNF777Q9ULD5 760 aaPredicted RBP23.79■■□□□ 1.4
RPL13A-214ENST00000624069 SAMD9LQ8IVG5 1584 aa23.78■■□□□ 1.4
RPL13A-214ENST00000624069 HNRNPMP52272 730 aaKnown RBP eCLIP23.77■■□□□ 1.43e-8■■■■■ 33.5
RPL13A-214ENST00000624069 PIP4K2BP78356 416 aa23.77■■□□□ 1.4
RPL13A-214ENST00000624069 TOM1O60784 492 aa23.75■■□□□ 1.39
RPL13A-214ENST00000624069 GGT6Q6P531 493 aa23.75■■□□□ 1.39
RPL13A-214ENST00000624069 SCAF1Q9H7N4 1312 aaKnown RBP23.75■■□□□ 1.39
RPL13A-214ENST00000624069 MED1Q15648 1581 aaPredicted RBP23.74■■□□□ 1.39
RPL13A-214ENST00000624069 CEP170BQ9Y4F5 1589 aaPredicted RBP23.74■■□□□ 1.39
RPL13A-214ENST00000624069 ZNF142P52746 1687 aaPredicted RBP23.71■■□□□ 1.39
RPL13A-214ENST00000624069 MYO3AQ8NEV4 1616 aa23.71■■□□□ 1.39
RPL13A-214ENST00000624069 A2MP01023 1474 aa23.69■■□□□ 1.38
RPL13A-214ENST00000624069 CLTCQ00610 1675 aaKnown RBP23.68■■□□□ 1.38
RPL13A-214ENST00000624069 SYCP2Q9BX26 1530 aa23.68■■□□□ 1.38
RPL13A-214ENST00000624069 GPATCH8Q9UKJ3 1502 aaKnown RBP23.68■■□□□ 1.38
RPL13A-214ENST00000624069 SUPT6HQ7KZ85 1726 aaKnown RBP23.67■■□□□ 1.38
RPL13A-214ENST00000624069 A2ML1A8K2U0 1454 aa23.67■■□□□ 1.38
RPL13A-214ENST00000624069 PLXNC1O60486 1568 aa23.66■■□□□ 1.38
RPL13A-214ENST00000624069 TIAM1Q13009 1591 aa23.66■■□□□ 1.38
RPL13A-214ENST00000624069 KIAA1107Q9UPP5 1409 aa23.66■■□□□ 1.38
RPL13A-214ENST00000624069 ATP7AQ04656 1500 aa23.65■■□□□ 1.38
RPL13A-214ENST00000624069 CDC42BPAQ5VT25 1732 aa23.65■■□□□ 1.38
RPL13A-214ENST00000624069 MTUS2Q5JR59 1369 aa23.65■■□□□ 1.38
RPL13A-214ENST00000624069 EHBP1L1Q8N3D4 1523 aa23.64■■□□□ 1.38
RPL13A-214ENST00000624069 SHANK2Q9UPX8 1470 aa23.64■■□□□ 1.38
RPL13A-214ENST00000624069 CPS1P31327 1500 aa23.64■■□□□ 1.37
RPL13A-214ENST00000624069 PHF23Q9BUL5 403 aaPredicted RBP23.63■■□□□ 1.37
RPL13A-214ENST00000624069 CFDP1Q9UEE9 299 aaPredicted RBP23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms