RNA–Protein interactions for RNA: ENST00000622827.4

CDH23-214, Transcript of cadherin related 23, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CDH23, Length 11,122 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-214ENST00000622827 VSIG10Q8N0Z9 540 aa18.19■□□□□ 0.5
CDH23-214ENST00000622827 NPM1P06748 294 aaKnown RBP eCLIP18.19■□□□□ 0.5
CDH23-214ENST00000622827 NPHP1O15259 732 aa18.17■□□□□ 0.5
CDH23-214ENST00000622827 TCERG1O14776 1098 aaKnown RBP18.17■□□□□ 0.5
CDH23-214ENST00000622827 U2SURPO15042 1029 aaKnown RBP18.14■□□□□ 0.49
CDH23-214ENST00000622827 CCER2I3L3R5 266 aa18.13■□□□□ 0.49
CDH23-214ENST00000622827 CSPP1Q1MSJ5 1256 aa18.13■□□□□ 0.49
CDH23-214ENST00000622827 ZNF771Q7L3S4 317 aaPredicted RBP18.12■□□□□ 0.49
CDH23-214ENST00000622827 DDX11L8A8MPP1 907 aa18.11■□□□□ 0.49
CDH23-214ENST00000622827 HAP1P54257 671 aaPredicted RBP18.11■□□□□ 0.49
CDH23-214ENST00000622827 EEA1Q15075 1411 aa18.11■□□□□ 0.49
CDH23-214ENST00000622827 TSHZ2Q9NRE2 1034 aa18.1■□□□□ 0.49
CDH23-214ENST00000622827 CALD1Q05682 793 aaKnown RBP18.1■□□□□ 0.49
CDH23-214ENST00000622827 ISY1Q9ULR0 285 aaKnown RBP18.09■□□□□ 0.49
CDH23-214ENST00000622827 RCAN3Q9UKA8 241 aa18.08■□□□□ 0.49
CDH23-214ENST00000622827 APBB1O00213 710 aa18.08■□□□□ 0.49
CDH23-214ENST00000622827 CCDC34Q96HJ3 373 aa18.08■□□□□ 0.48
CDH23-214ENST00000622827 KTN1Q86UP2 1357 aaKnown RBP18.08■□□□□ 0.48
CDH23-214ENST00000622827 IPO8O15397 1037 aaKnown RBP18.07■□□□□ 0.48
CDH23-214ENST00000622827 RWDD1Q9H446 243 aaPredicted RBP18.06■□□□□ 0.48
CDH23-214ENST00000622827 TPM3P06753 285 aa18.06■□□□□ 0.48
CDH23-214ENST00000622827 MFAP1P55081 439 aaKnown RBP18.06■□□□□ 0.48
CDH23-214ENST00000622827 PDE4CQ08493 712 aa18.05■□□□□ 0.48
CDH23-214ENST00000622827 ITPRIPQ8IWB1 547 aa18.05■□□□□ 0.48
CDH23-214ENST00000622827 GPATCH3Q96I76 525 aa18.04■□□□□ 0.48
CDH23-214ENST00000622827 POGKQ9P215 609 aa18.03■□□□□ 0.48
CDH23-214ENST00000622827 HSP90B1P14625 803 aaKnown RBP18.03■□□□□ 0.48
CDH23-214ENST00000622827 PRM3Q9NNZ6 103 aa18.03■□□□□ 0.48
CDH23-214ENST00000622827 CEP164Q9UPV0 1460 aa18.01■□□□□ 0.47
CDH23-214ENST00000622827 CCAR2Q8N163 923 aaKnown RBP18.01■□□□□ 0.47
CDH23-214ENST00000622827 GPS2Q13227 327 aa18■□□□□ 0.47
CDH23-214ENST00000622827 SIN3AQ96ST3 1273 aa17.99■□□□□ 0.47
CDH23-214ENST00000622827 TMF1P82094 1093 aa17.99■□□□□ 0.47
CDH23-214ENST00000622827 TEX35Q5T0J7 233 aa17.99■□□□□ 0.47
CDH23-214ENST00000622827 TIMELESSQ9UNS1 1208 aa17.99■□□□□ 0.47
CDH23-214ENST00000622827 PATL2C9JE40 543 aaKnown RBP17.99■□□□□ 0.47
CDH23-214ENST00000622827 KIF16BQ96L93 1317 aa17.98■□□□□ 0.47
CDH23-214ENST00000622827 FOXD4L1Q9NU39 408 aa17.98■□□□□ 0.47
CDH23-214ENST00000622827 CREBRFQ8IUR6 639 aa17.97■□□□□ 0.47
CDH23-214ENST00000622827 ST18O60284 1047 aa17.96■□□□□ 0.47
CDH23-214ENST00000622827 GSE1Q14687 1217 aa17.96■□□□□ 0.47
CDH23-214ENST00000622827 CCDC70Q6NSX1 233 aa17.96■□□□□ 0.47
CDH23-214ENST00000622827 PMFBP1Q8TBY8 1022 aa17.96■□□□□ 0.47
CDH23-214ENST00000622827 MORC1Q86VD1 984 aa17.96■□□□□ 0.47
CDH23-214ENST00000622827 CCNB3Q8WWL7 1395 aa17.95■□□□□ 0.46
CDH23-214ENST00000622827 TRIM6-TRIM34B2RNG4 842 aa17.95■□□□□ 0.46
CDH23-214ENST00000622827 RASSF8Q8NHQ8 419 aa17.94■□□□□ 0.46
CDH23-214ENST00000622827 FAM13BQ9NYF5 915 aa17.94■□□□□ 0.46
CDH23-214ENST00000622827 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.93■□□□□ 0.46
CDH23-214ENST00000622827 CFDP1Q9UEE9 299 aaPredicted RBP17.93■□□□□ 0.46
CDH23-214ENST00000622827 FOXD4L5Q5VV16 416 aaPredicted RBP17.93■□□□□ 0.46
CDH23-214ENST00000622827 FOXD4L4Q8WXT5 416 aaPredicted RBP17.93■□□□□ 0.46
CDH23-214ENST00000622827 LMOD2Q6P5Q4 547 aa17.93■□□□□ 0.46
CDH23-214ENST00000622827 NOM1Q5C9Z4 860 aaKnown RBP17.93■□□□□ 0.46
CDH23-214ENST00000622827 NOL8Q76FK4 1167 aaKnown RBP17.92■□□□□ 0.46
CDH23-214ENST00000622827 SKOR2Q2VWA4 1001 aaPredicted RBP17.91■□□□□ 0.46
CDH23-214ENST00000622827 TSR1Q2NL82 804 aaKnown RBP17.91■□□□□ 0.46
CDH23-214ENST00000622827 RTF1Q92541 710 aaKnown RBP17.91■□□□□ 0.46
CDH23-214ENST00000622827 CEP89Q96ST8 783 aa17.9■□□□□ 0.46
CDH23-214ENST00000622827 GOLGA6L19H0YKK7 550 aa17.9■□□□□ 0.46
CDH23-214ENST00000622827 ZNF592Q92610 1267 aa17.89■□□□□ 0.45
CDH23-214ENST00000622827 CHMP7Q8WUX9 453 aaPredicted RBP17.89■□□□□ 0.45
CDH23-214ENST00000622827 KCNH8Q96L42 1107 aa17.88■□□□□ 0.45
CDH23-214ENST00000622827 PLEKHD1A6NEE1 506 aa17.88■□□□□ 0.45
CDH23-214ENST00000622827 TPM1P09493 284 aa17.88■□□□□ 0.45
CDH23-214ENST00000622827 ARHGAP35Q9NRY4 1499 aa17.87■□□□□ 0.45
CDH23-214ENST00000622827 TNIKQ9UKE5 1360 aa17.87■□□□□ 0.45
CDH23-214ENST00000622827 PES1O00541 588 aaKnown RBP17.87■□□□□ 0.45
CDH23-214ENST00000622827 RALBP1Q15311 655 aa17.87■□□□□ 0.45
CDH23-214ENST00000622827 RRP12Q5JTH9 1297 aaKnown RBP17.86■□□□□ 0.45
CDH23-214ENST00000622827 KANK1Q14678 1352 aa17.86■□□□□ 0.45
CDH23-214ENST00000622827 HMMRO75330 724 aa17.86■□□□□ 0.45
CDH23-214ENST00000622827 SETD5Q9C0A6 1442 aa17.86■□□□□ 0.45
CDH23-214ENST00000622827 DCAF11Q8TEB1 546 aa17.86■□□□□ 0.45
CDH23-214ENST00000622827 TPD52L1Q16890 204 aaPredicted RBP17.85■□□□□ 0.45
CDH23-214ENST00000622827 ROCK2O75116 1388 aaKnown RBP17.85■□□□□ 0.45
CDH23-214ENST00000622827 FHAD1B1AJZ9 1412 aa17.85■□□□□ 0.45
CDH23-214ENST00000622827 ATP6V1DQ9Y5K8 247 aa17.84■□□□□ 0.45
CDH23-214ENST00000622827 KIF3AQ9Y496 699 aa17.84■□□□□ 0.45
CDH23-214ENST00000622827 DDX49Q9Y6V7 483 aaKnown RBP17.84■□□□□ 0.45
CDH23-214ENST00000622827 KIF27Q86VH2 1401 aa17.84■□□□□ 0.45
CDH23-214ENST00000622827 H3BQV1 296 aa17.83■□□□□ 0.44
CDH23-214ENST00000622827 IFFO2Q5TF58 517 aa17.83■□□□□ 0.44
CDH23-214ENST00000622827 SF3A1Q15459 793 aaKnown RBP17.83■□□□□ 0.44
CDH23-214ENST00000622827 SRPK2P78362 688 aaKnown RBP17.82■□□□□ 0.44
CDH23-214ENST00000622827 HSPA5P11021 654 aaKnown RBP17.82■□□□□ 0.44
CDH23-214ENST00000622827 SMC4Q9NTJ3 1288 aa17.81■□□□□ 0.44
CDH23-214ENST00000622827 BECN2A8MW95 431 aa17.81■□□□□ 0.44
CDH23-214ENST00000622827 APPP05067 770 aa17.81■□□□□ 0.44
CDH23-214ENST00000622827 PKNOX2Q96KN3 472 aa17.81■□□□□ 0.44
CDH23-214ENST00000622827 EIF3AQ14152 1382 aaKnown RBP17.8■□□□□ 0.44
CDH23-214ENST00000622827 EIF4G1Q04637 1599 aaKnown RBP17.8■□□□□ 0.44
CDH23-214ENST00000622827 FAM43AQ8N2R8 423 aa17.8■□□□□ 0.44
CDH23-214ENST00000622827 SOX12O15370 315 aa17.8■□□□□ 0.44
CDH23-214ENST00000622827 GORABQ5T7V8 394 aa17.79■□□□□ 0.44
CDH23-214ENST00000622827 CENPJQ9HC77 1338 aaPredicted RBP17.79■□□□□ 0.44
CDH23-214ENST00000622827 AK7Q96M32 723 aa17.79■□□□□ 0.44
CDH23-214ENST00000622827 PHLDB1Q86UU1 1377 aa17.79■□□□□ 0.44
CDH23-214ENST00000622827 CWC15Q9P013 229 aaKnown RBP17.78■□□□□ 0.44
CDH23-214ENST00000622827 TPM2P07951 284 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms