RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 HECW1Q76N89 1606 aa17.1■□□□□ 0.33
LITAF-221ENST00000622633 DENND4BO75064 1496 aaPredicted RBP17.1■□□□□ 0.33
LITAF-221ENST00000622633 HSPA5P11021 654 aaKnown RBP17.09■□□□□ 0.33
LITAF-221ENST00000622633 MPHOSPH9Q99550 1183 aa17.09■□□□□ 0.33
LITAF-221ENST00000622633 FOXD1Q16676 465 aa17.08■□□□□ 0.33
LITAF-221ENST00000622633 KDM6BO15054 1643 aa17.08■□□□□ 0.32
LITAF-221ENST00000622633 PBRM1Q86U86 1689 aa17.08■□□□□ 0.32
LITAF-221ENST00000622633 NEFLP07196 543 aa17.07■□□□□ 0.32
LITAF-221ENST00000622633 MIA2Q96PC5 1412 aa17.06■□□□□ 0.32
LITAF-221ENST00000622633 WASHC2AQ641Q2 1341 aa17.06■□□□□ 0.32
LITAF-221ENST00000622633 ADAMTS12P58397 1594 aa17.06■□□□□ 0.32
LITAF-221ENST00000622633 L3MBTL2Q969R5 705 aa17.05■□□□□ 0.32
LITAF-221ENST00000622633 ZMYND15Q9H091 742 aa17.05■□□□□ 0.32
LITAF-221ENST00000622633 WDR62O43379 1518 aa17.04■□□□□ 0.32
LITAF-221ENST00000622633 AKNAQ7Z591 1439 aa17.04■□□□□ 0.32
LITAF-221ENST00000622633 GCC2Q8IWJ2 1684 aa17.03■□□□□ 0.32
LITAF-221ENST00000622633 EIF4G2P78344 907 aaKnown RBP eCLIP17.03■□□□□ 0.32
LITAF-221ENST00000622633 MRC2Q9UBG0 1479 aa17.02■□□□□ 0.32
LITAF-221ENST00000622633 ZNF644Q9H582 1327 aaPredicted RBP17.02■□□□□ 0.31
LITAF-221ENST00000622633 ZNF608Q9ULD9 1512 aaPredicted RBP17.01■□□□□ 0.31
LITAF-221ENST00000622633 HNRNPUQ00839 825 aaKnown RBP eCLIP16.99■□□□□ 0.31
LITAF-221ENST00000622633 NOP58Q9Y2X3 529 aaKnown RBP16.99■□□□□ 0.31
LITAF-221ENST00000622633 CDK11AQ9UQ88 783 aaPredicted RBP16.98■□□□□ 0.31
LITAF-221ENST00000622633 DAPK1P53355 1430 aa16.97■□□□□ 0.31
LITAF-221ENST00000622633 C11orf95C9JLR9 678 aaPredicted RBP16.97■□□□□ 0.31
LITAF-221ENST00000622633 PAK3O75914 559 aaPredicted RBP16.96■□□□□ 0.31
LITAF-221ENST00000622633 ABCC5O15440 1437 aa16.96■□□□□ 0.31
LITAF-221ENST00000622633 NBPF8Q3BBV2 869 aa16.95■□□□□ 0.3
LITAF-221ENST00000622633 DISP1Q96F81 1524 aa16.95■□□□□ 0.3
LITAF-221ENST00000622633 ANKRD30BQ9BXX2 1392 aa16.95■□□□□ 0.3
LITAF-221ENST00000622633 KIAA0586Q9BVV6 1533 aa16.95■□□□□ 0.3
LITAF-221ENST00000622633 ROCK1Q13464 1354 aa16.94■□□□□ 0.3
LITAF-221ENST00000622633 SLC4A1APQ9BWU0 796 aaKnown RBP16.94■□□□□ 0.3
LITAF-221ENST00000622633 IFT140Q96RY7 1462 aa16.94■□□□□ 0.3
LITAF-221ENST00000622633 NUP153P49790 1475 aaKnown RBP16.93■□□□□ 0.3
LITAF-221ENST00000622633 CCDC184Q52MB2 194 aa16.93■□□□□ 0.3
LITAF-221ENST00000622633 GLIPR1L2Q4G1C9 344 aa16.92■□□□□ 0.3
LITAF-221ENST00000622633 VSIG10Q8N0Z9 540 aa16.92■□□□□ 0.3
LITAF-221ENST00000622633 RTL5Q5HYW3 569 aaPredicted RBP16.91■□□□□ 0.3
LITAF-221ENST00000622633 KIAA0556O60303 1618 aa16.91■□□□□ 0.3
LITAF-221ENST00000622633 CCDC7Q96M83 1385 aa16.91■□□□□ 0.3
LITAF-221ENST00000622633 CNTLNQ9NXG0 1405 aa16.9■□□□□ 0.3
LITAF-221ENST00000622633 RPRD2Q5VT52 1461 aaKnown RBP16.89■□□□□ 0.3
LITAF-221ENST00000622633 NCOA1Q15788 1441 aa16.88■□□□□ 0.29
LITAF-221ENST00000622633 PRG4Q92954 1404 aaPredicted RBP16.88■□□□□ 0.29
LITAF-221ENST00000622633 DNMT1P26358 1616 aaKnown RBP16.88■□□□□ 0.29
LITAF-221ENST00000622633 IRX6P78412 446 aaPredicted RBP16.88■□□□□ 0.29
LITAF-221ENST00000622633 CFDP1Q9UEE9 299 aaPredicted RBP16.88■□□□□ 0.29
LITAF-221ENST00000622633 GRIN2AQ12879 1464 aa16.87■□□□□ 0.29
LITAF-221ENST00000622633 PRKRIP1Q9H875 184 aaPredicted RBP16.87■□□□□ 0.29
LITAF-221ENST00000622633 ZNF777Q9ULD5 760 aaPredicted RBP16.87■□□□□ 0.29
LITAF-221ENST00000622633 RAPGEF6Q8TEU7 1601 aa16.86■□□□□ 0.29
LITAF-221ENST00000622633 TEX14Q8IWB6 1497 aa16.85■□□□□ 0.29
LITAF-221ENST00000622633 CHMP7Q8WUX9 453 aaPredicted RBP16.85■□□□□ 0.29
LITAF-221ENST00000622633 RSPH6AQ9H0K4 717 aa16.85■□□□□ 0.29
LITAF-221ENST00000622633 FAM9BQ8IZU0 186 aa16.84■□□□□ 0.29
LITAF-221ENST00000622633 TROQ12816 1431 aaPredicted RBP16.83■□□□□ 0.29
LITAF-221ENST00000622633 FBLN2P98095 1184 aa16.83■□□□□ 0.28
LITAF-221ENST00000622633 KIF7Q2M1P5 1343 aa16.83■□□□□ 0.28
LITAF-221ENST00000622633 MRS2Q9HD23 443 aa16.82■□□□□ 0.28
LITAF-221ENST00000622633 PLB1Q6P1J6 1458 aa16.82■□□□□ 0.28
LITAF-221ENST00000622633 PZPP20742 1482 aa16.81■□□□□ 0.28
LITAF-221ENST00000622633 SPATA31E1Q6ZUB1 1445 aa16.81■□□□□ 0.28
LITAF-221ENST00000622633 WASHC2CQ9Y4E1 1318 aa16.81■□□□□ 0.28
LITAF-221ENST00000622633 CAMSAP2Q08AD1 1489 aa16.81■□□□□ 0.28
LITAF-221ENST00000622633 GPATCH8Q9UKJ3 1502 aaKnown RBP16.8■□□□□ 0.28
LITAF-221ENST00000622633 FGD1P98174 961 aa16.8■□□□□ 0.28
LITAF-221ENST00000622633 EIF4G3O43432 1585 aaKnown RBP16.8■□□□□ 0.28
LITAF-221ENST00000622633 PDE4CQ08493 712 aa16.79■□□□□ 0.28
LITAF-221ENST00000622633 A0A0U1RQG5 324 aaPredicted RBP16.79■□□□□ 0.28
LITAF-221ENST00000622633 ZNF326Q5BKZ1 582 aaKnown RBP16.78■□□□□ 0.28
LITAF-221ENST00000622633 PKD2Q13563 968 aa16.78■□□□□ 0.28
LITAF-221ENST00000622633 BRPF3Q9ULD4 1205 aa16.78■□□□□ 0.28
LITAF-221ENST00000622633 JPH4Q96JJ6 628 aa16.77■□□□□ 0.27
LITAF-221ENST00000622633 AAMPQ13685 434 aa16.76■□□□□ 0.27
LITAF-221ENST00000622633 CNGB1Q14028 1251 aaPredicted RBP16.76■□□□□ 0.27
LITAF-221ENST00000622633 POLR3GLQ9BT43 218 aa16.75■□□□□ 0.27
LITAF-221ENST00000622633 CEP170Q5SW79 1584 aa16.75■□□□□ 0.27
LITAF-221ENST00000622633 KIF14Q15058 1648 aa16.75■□□□□ 0.27
LITAF-221ENST00000622633 KIAA1107Q9UPP5 1409 aa16.75■□□□□ 0.27
LITAF-221ENST00000622633 RBM10P98175 930 aaKnown RBP16.74■□□□□ 0.27
LITAF-221ENST00000622633 MAGI1Q96QZ7 1491 aaPredicted RBP16.73■□□□□ 0.27
LITAF-221ENST00000622633 ANKRD30AQ9BXX3 1397 aa16.73■□□□□ 0.27
LITAF-221ENST00000622633 SYNJ2O15056 1496 aa16.73■□□□□ 0.27
LITAF-221ENST00000622633 ERCC6Q03468 1493 aa16.73■□□□□ 0.27
LITAF-221ENST00000622633 PLEKHD1A6NEE1 506 aa16.72■□□□□ 0.27
LITAF-221ENST00000622633 ZBED9Q6R2W3 1325 aa16.72■□□□□ 0.27
LITAF-221ENST00000622633 CARMIL2Q6F5E8 1435 aa16.71■□□□□ 0.27
LITAF-221ENST00000622633 USP47Q96K76 1375 aa16.71■□□□□ 0.27
LITAF-221ENST00000622633 ADGRL2O95490 1459 aa16.71■□□□□ 0.27
LITAF-221ENST00000622633 ITSN2Q9NZM3 1697 aa16.7■□□□□ 0.26
LITAF-221ENST00000622633 ANKRD50Q9ULJ7 1429 aa16.7■□□□□ 0.26
LITAF-221ENST00000622633 MBD5Q9P267 1494 aa16.69■□□□□ 0.26
LITAF-221ENST00000622633 PDIA4P13667 645 aaKnown RBP16.69■□□□□ 0.26
LITAF-221ENST00000622633 PPP4R2Q9NY27 417 aa16.69■□□□□ 0.26
LITAF-221ENST00000622633 ADGBQ8N7X0 1667 aa16.68■□□□□ 0.26
LITAF-221ENST00000622633 NUP155O75694 1391 aa16.68■□□□□ 0.26
LITAF-221ENST00000622633 DHX29Q7Z478 1369 aaKnown RBP16.68■□□□□ 0.26
LITAF-221ENST00000622633 AEBP2Q6ZN18 517 aaPredicted RBP16.67■□□□□ 0.26
LITAF-221ENST00000622633 ADCY10Q96PN6 1610 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms