RNA–Protein interactions for RNA: ENST00000622457.1

LTBP4-238, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 2

Gene LTBP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-238	ENST00000622457	PREX1	Q8TCU6	1659 aa		19.09	■□□□□ 0.65
LTBP4-238	ENST00000622457	CEP162	Q5TB80	1403 aa		19.08	■□□□□ 0.65
LTBP4-238	ENST00000622457	TTC37	Q6PGP7	1564 aa		19.08	■□□□□ 0.65
LTBP4-238	ENST00000622457	YEATS2	Q9ULM3	1422 aa		19.08	■□□□□ 0.64
LTBP4-238	ENST00000622457	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	19.06	■□□□□ 0.64
LTBP4-238	ENST00000622457	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	19.06	■□□□□ 0.64
LTBP4-238	ENST00000622457	HNRNPUL2	Q1KMD3	747 aa	Known RBP	19.06	■□□□□ 0.64
LTBP4-238	ENST00000622457	CFAP74	Q9C0B2	1584 aa		19.06	■□□□□ 0.64
LTBP4-238	ENST00000622457	PHLDB1	Q86UU1	1377 aa		19.06	■□□□□ 0.64
LTBP4-238	ENST00000622457	PLEKHD1	A6NEE1	506 aa		19.05	■□□□□ 0.64
LTBP4-238	ENST00000622457	MLEC	Q14165	292 aa		19.05	■□□□□ 0.64
LTBP4-238	ENST00000622457	KIF14	Q15058	1648 aa		19.04	■□□□□ 0.64
LTBP4-238	ENST00000622457	LTBP4	Q8N2S1	1624 aa		19.04	■□□□□ 0.64
LTBP4-238	ENST00000622457	CEBPA	P49715	358 aa	Predicted RBP	19.03	■□□□□ 0.64
LTBP4-238	ENST00000622457	MYO5C	Q9NQX4	1742 aa		19.03	■□□□□ 0.64
LTBP4-238	ENST00000622457	TRO	Q12816	1431 aa	Predicted RBP	19.01	■□□□□ 0.63
LTBP4-238	ENST00000622457	CDK11A	Q9UQ88	783 aa	Predicted RBP	19	■□□□□ 0.63
LTBP4-238	ENST00000622457	FANCA	O15360	1455 aa		18.99	■□□□□ 0.63
LTBP4-238	ENST00000622457	DENND4B	O75064	1496 aa	Predicted RBP	18.97	■□□□□ 0.63
LTBP4-238	ENST00000622457	ZMYM4	Q5VZL5	1548 aa		18.97	■□□□□ 0.63
LTBP4-238	ENST00000622457	ZFYVE16	Q7Z3T8	1539 aa		18.97	■□□□□ 0.63
LTBP4-238	ENST00000622457	ARHGEF12	Q9NZN5	1544 aa		18.95	■□□□□ 0.62
LTBP4-238	ENST00000622457	ATP1B4	Q9UN42	357 aa	Predicted RBP	18.95	■□□□□ 0.62
LTBP4-238	ENST00000622457	AKNA	Q7Z591	1439 aa		18.94	■□□□□ 0.62
LTBP4-238	ENST00000622457	POGZ	Q7Z3K3	1410 aa		18.92	■□□□□ 0.62
LTBP4-238	ENST00000622457	PREX2	Q70Z35	1606 aa		18.92	■□□□□ 0.62
LTBP4-238	ENST00000622457	PLCH2	O75038	1416 aa		18.91	■□□□□ 0.62
LTBP4-238	ENST00000622457	LOC105371045	A0A1W2PR82	267 aa		18.91	■□□□□ 0.62
LTBP4-238	ENST00000622457	CDC42BPB	Q9Y5S2	1711 aa		18.9	■□□□□ 0.62
LTBP4-238	ENST00000622457	CDC42BPA	Q5VT25	1732 aa		18.89	■□□□□ 0.61
LTBP4-238	ENST00000622457	SETD1B	Q9UPS6	1966 aa	Known RBP	18.89	■□□□□ 0.61
LTBP4-238	ENST00000622457	VPS8	Q8N3P4	1428 aa		18.89	■□□□□ 0.61
LTBP4-238	ENST00000622457	PTPRT	O14522	1441 aa		18.87	■□□□□ 0.61
LTBP4-238	ENST00000622457	EHBP1L1	Q8N3D4	1523 aa		18.87	■□□□□ 0.61
LTBP4-238	ENST00000622457	C3	P01024	1663 aa		18.85	■□□□□ 0.61
LTBP4-238	ENST00000622457	DMRT2	Q9Y5R5	561 aa		18.85	■□□□□ 0.61
LTBP4-238	ENST00000622457	TIAM1	Q13009	1591 aa		18.84	■□□□□ 0.61
LTBP4-238	ENST00000622457	ARHGAP5	Q13017	1502 aa		18.84	■□□□□ 0.61
LTBP4-238	ENST00000622457	MED1	Q15648	1581 aa	Predicted RBP	18.83	■□□□□ 0.6
LTBP4-238	ENST00000622457	UHRF1BP1	Q6BDS2	1440 aa		18.83	■□□□□ 0.6
LTBP4-238	ENST00000622457	IQSEC2	Q5JU85	1478 aa		18.82	■□□□□ 0.6
LTBP4-238	ENST00000622457	MAP3K1	Q13233	1512 aa		18.81	■□□□□ 0.6
LTBP4-238	ENST00000622457	ITSN2	Q9NZM3	1697 aa		18.81	■□□□□ 0.6
LTBP4-238	ENST00000622457	MTUS2	Q5JR59	1369 aa		18.8	■□□□□ 0.6
LTBP4-238	ENST00000622457	MAGI2	Q86UL8	1455 aa		18.79	■□□□□ 0.6
LTBP4-238	ENST00000622457	SUPT6H	Q7KZ85	1726 aa	Known RBP	18.79	■□□□□ 0.6
LTBP4-238	ENST00000622457	ABCC1	P33527	1531 aa		18.79	■□□□□ 0.6
LTBP4-238	ENST00000622457	ATP10A	O60312	1499 aa		18.78	■□□□□ 0.6
LTBP4-238	ENST00000622457	EFCAB2	Q5VUJ9	269 aa		18.77	■□□□□ 0.6
LTBP4-238	ENST00000622457	KDM5C	P41229	1560 aa		18.76	■□□□□ 0.59
LTBP4-238	ENST00000622457	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	18.75	■□□□□ 0.59
LTBP4-238	ENST00000622457	NCOA1	Q15788	1441 aa		18.75	■□□□□ 0.59
LTBP4-238	ENST00000622457	C9orf84	Q5VXU9	1444 aa		18.75	■□□□□ 0.59
LTBP4-238	ENST00000622457	SCAPER	Q9BY12	1400 aa		18.75	■□□□□ 0.59
LTBP4-238	ENST00000622457	GPATCH8	Q9UKJ3	1502 aa	Known RBP	18.75	■□□□□ 0.59
LTBP4-238	ENST00000622457	UBAP1L	F5GYI3	381 aa		18.75	■□□□□ 0.59
LTBP4-238	ENST00000622457	ZNF518A	Q6AHZ1	1483 aa		18.75	■□□□□ 0.59
LTBP4-238	ENST00000622457	SAMD9L	Q8IVG5	1584 aa		18.73	■□□□□ 0.59
LTBP4-238	ENST00000622457	LRRC9	Q6ZRR7	1453 aa		18.71	■□□□□ 0.59
LTBP4-238	ENST00000622457	CAMSAP1	Q5T5Y3	1602 aa		18.7	■□□□□ 0.58
LTBP4-238	ENST00000622457	HSPA1L	P34931	641 aa		18.69	■□□□□ 0.58
LTBP4-238	ENST00000622457	PLEKHH2	Q8IVE3	1493 aa		18.69	■□□□□ 0.58
LTBP4-238	ENST00000622457	CCNB3	Q8WWL7	1395 aa		18.68	■□□□□ 0.58
LTBP4-238	ENST00000622457	DIP2C	Q9Y2E4	1556 aa		18.68	■□□□□ 0.58
LTBP4-238	ENST00000622457	NCOA2	Q15596	1464 aa		18.68	■□□□□ 0.58
LTBP4-238	ENST00000622457	NCKAP5L	Q9HCH0	1330 aa		18.68	■□□□□ 0.58
LTBP4-238	ENST00000622457	SYCP2	Q9BX26	1530 aa		18.66	■□□□□ 0.58
LTBP4-238	ENST00000622457	ABCA6	Q8N139	1617 aa		18.66	■□□□□ 0.58
LTBP4-238	ENST00000622457	KIAA1107	Q9UPP5	1409 aa		18.66	■□□□□ 0.58
LTBP4-238	ENST00000622457	RERE	Q9P2R6	1566 aa		18.65	■□□□□ 0.58
LTBP4-238	ENST00000622457	MLH3	Q9UHC1	1453 aa		18.65	■□□□□ 0.58
LTBP4-238	ENST00000622457	KIDINS220	Q9ULH0	1771 aa		18.63	■□□□□ 0.57
LTBP4-238	ENST00000622457	TRAPPC8	Q9Y2L5	1435 aa		18.61	■□□□□ 0.57
LTBP4-238	ENST00000622457	INO80	Q9ULG1	1556 aa	Predicted RBP	18.6	■□□□□ 0.57
LTBP4-238	ENST00000622457	AFAP1	Q8N556	730 aa		18.6	■□□□□ 0.57
LTBP4-238	ENST00000622457	CFDP1	Q9UEE9	299 aa	Predicted RBP	18.6	■□□□□ 0.57
LTBP4-238	ENST00000622457	ALK	Q9UM73	1620 aa		18.59	■□□□□ 0.57
LTBP4-238	ENST00000622457	PIP4K2B	P78356	416 aa		18.57	■□□□□ 0.56
LTBP4-238	ENST00000622457	CAMSAP2	Q08AD1	1489 aa		18.57	■□□□□ 0.56
LTBP4-238	ENST00000622457	ATP7A	Q04656	1500 aa		18.56	■□□□□ 0.56
LTBP4-238	ENST00000622457	MBD5	Q9P267	1494 aa		18.56	■□□□□ 0.56
LTBP4-238	ENST00000622457	ARHGEF5	Q12774	1597 aa		18.55	■□□□□ 0.56
LTBP4-238	ENST00000622457	SCAF1	Q9H7N4	1312 aa	Known RBP	18.55	■□□□□ 0.56
LTBP4-238	ENST00000622457	AGL	P35573	1532 aa		18.54	■□□□□ 0.56
LTBP4-238	ENST00000622457	ADGB	Q8N7X0	1667 aa		18.54	■□□□□ 0.56
LTBP4-238	ENST00000622457	KANK4	Q5T7N3	995 aa	Predicted RBP	18.53	■□□□□ 0.56
LTBP4-238	ENST00000622457	MYOM3	Q5VTT5	1437 aa		18.53	■□□□□ 0.56
LTBP4-238	ENST00000622457	MIA2	Q96PC5	1412 aa		18.53	■□□□□ 0.56
LTBP4-238	ENST00000622457	ZNF777	Q9ULD5	760 aa	Predicted RBP	18.53	■□□□□ 0.56
LTBP4-238	ENST00000622457	ZNF142	P52746	1687 aa	Predicted RBP	18.53	■□□□□ 0.56
LTBP4-238	ENST00000622457	APLP2	Q06481	763 aa		18.52	■□□□□ 0.56
LTBP4-238	ENST00000622457	MYO3A	Q8NEV4	1616 aa		18.52	■□□□□ 0.55
LTBP4-238	ENST00000622457	PLXNC1	O60486	1568 aa		18.51	■□□□□ 0.55
LTBP4-238	ENST00000622457	CCDC141	Q6ZP82	1450 aa		18.51	■□□□□ 0.55
LTBP4-238	ENST00000622457	TCOF1	Q13428	1488 aa	Known RBP	18.5	■□□□□ 0.55
LTBP4-238	ENST00000622457	RGS17	Q9UGC6	210 aa	Predicted RBP	18.49	■□□□□ 0.55
LTBP4-238	ENST00000622457	MROH2A	A6NES4	1674 aa		18.49	■□□□□ 0.55
LTBP4-238	ENST00000622457	RTEL1-TNFRSF6B	F6WH68	1400 aa		18.49	■□□□□ 0.55
LTBP4-238	ENST00000622457	HNRNPM	P52272	730 aa	Known RBP eCLIP	18.48	■□□□□ 0.55
LTBP4-238	ENST00000622457	SENP3	Q9H4L4	574 aa	Predicted RBP	18.48	■□□□□ 0.55

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