RNA–Protein interactions for RNA: ENST00000620412.4

PMPCA-210, Transcript of peptidase, mitochondrial processing alpha subunit, humanhuman

TSL 2

Gene PMPCA, Length 590 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCA-210ENST00000620412 SCAPERQ9BY12 1400 aa34.11■■■■□ 3.05
PMPCA-210ENST00000620412 ADAMTSL3P82987 1691 aa34.09■■■■□ 3.05
PMPCA-210ENST00000620412 RICTORQ6R327 1708 aa34.09■■■■□ 3.05
PMPCA-210ENST00000620412 ARHGEF40Q8TER5 1519 aa34.07■■■■□ 3.04
PMPCA-210ENST00000620412 YEATS2Q9ULM3 1422 aa34.06■■■■□ 3.04
PMPCA-210ENST00000620412 MYO5CQ9NQX4 1742 aa34.04■■■■□ 3.04
PMPCA-210ENST00000620412 ILDR1Q86SU0 546 aaPredicted RBP34.04■■■■□ 3.04
PMPCA-210ENST00000620412 BCORL1Q5H9F3 1711 aa34.02■■■■□ 3.04
PMPCA-210ENST00000620412 POGZQ7Z3K3 1410 aa34.01■■■■□ 3.03
PMPCA-210ENST00000620412 ZMYM4Q5VZL5 1548 aa34■■■■□ 3.03
PMPCA-210ENST00000620412 ZFYVE16Q7Z3T8 1539 aa34■■■■□ 3.03
PMPCA-210ENST00000620412 MAP3K1Q13233 1512 aa33.99■■■■□ 3.03
PMPCA-210ENST00000620412 EHBP1L1Q8N3D4 1523 aa33.99■■■■□ 3.03
PMPCA-210ENST00000620412 MADDQ8WXG6 1647 aa33.98■■■■□ 3.03
PMPCA-210ENST00000620412 MLECQ14165 292 aa33.98■■■■□ 3.03
PMPCA-210ENST00000620412 MAGI2Q86UL8 1455 aa33.98■■■■□ 3.03
PMPCA-210ENST00000620412 PLPPR3Q6T4P5 718 aa33.97■■■■□ 3.03
PMPCA-210ENST00000620412 TIAM1Q13009 1591 aa33.97■■■■□ 3.03
PMPCA-210ENST00000620412 AFAP1Q8N556 730 aa33.92■■■■□ 3.02
PMPCA-210ENST00000620412 PREX2Q70Z35 1606 aa33.92■■■■□ 3.02
PMPCA-210ENST00000620412 ARHGAP5Q13017 1502 aa33.91■■■■□ 3.02
PMPCA-210ENST00000620412 MYT1LQ9UL68 1186 aa33.88■■■■□ 3.01
PMPCA-210ENST00000620412 CDC42BPAQ5VT25 1732 aa33.87■■■■□ 3.01
PMPCA-210ENST00000620412 CDC42BPBQ9Y5S2 1711 aa33.86■■■■□ 3.01
PMPCA-210ENST00000620412 ATP10AO60312 1499 aa33.86■■■■□ 3.01
PMPCA-210ENST00000620412 MTUS2Q5JR59 1369 aa33.85■■■■□ 3.01
PMPCA-210ENST00000620412 RIMS1Q86UR5 1692 aaKnown RBP33.84■■■■□ 3.01
PMPCA-210ENST00000620412 SIGLEC1Q9BZZ2 1709 aa33.84■■■■□ 3.01
PMPCA-210ENST00000620412 ZNF518AQ6AHZ1 1483 aa33.82■■■■□ 3
PMPCA-210ENST00000620412 SUPT6HQ7KZ85 1726 aaKnown RBP33.81■■■■□ 3
PMPCA-210ENST00000620412 C9orf84Q5VXU9 1444 aa33.79■■■■□ 3
PMPCA-210ENST00000620412 ITSN2Q9NZM3 1697 aa33.77■■■■□ 3
PMPCA-210ENST00000620412 LRRC9Q6ZRR7 1453 aa33.77■■■■□ 3
PMPCA-210ENST00000620412 LMTK3Q96Q04 1460 aa33.76■■■□□ 2.99
PMPCA-210ENST00000620412 HSPA2P54652 639 aa33.74■■■□□ 2.99
PMPCA-210ENST00000620412 ZNF777Q9ULD5 760 aaPredicted RBP33.72■■■□□ 2.99
PMPCA-210ENST00000620412 GPATCH8Q9UKJ3 1502 aaKnown RBP33.72■■■□□ 2.99
PMPCA-210ENST00000620412 TRAPPC8Q9Y2L5 1435 aa33.71■■■□□ 2.99
PMPCA-210ENST00000620412 ARHGEF12Q9NZN5 1544 aa33.69■■■□□ 2.98
PMPCA-210ENST00000620412 KDM5CP41229 1560 aa33.69■■■□□ 2.98
PMPCA-210ENST00000620412 ABCC1P33527 1531 aa33.68■■■□□ 2.98
PMPCA-210ENST00000620412 CEBPAP49715 358 aaPredicted RBP33.67■■■□□ 2.98
PMPCA-210ENST00000620412 NCOA2Q15596 1464 aa33.66■■■□□ 2.98
PMPCA-210ENST00000620412 MLH3Q9UHC1 1453 aa33.63■■■□□ 2.97
PMPCA-210ENST00000620412 CCNB3Q8WWL7 1395 aa33.63■■■□□ 2.97
PMPCA-210ENST00000620412 SAMD9LQ8IVG5 1584 aa33.61■■■□□ 2.97
PMPCA-210ENST00000620412 FER1L4A9Z1Z3 1794 aa33.6■■■□□ 2.97
PMPCA-210ENST00000620412 DIP2CQ9Y2E4 1556 aa33.6■■■□□ 2.97
PMPCA-210ENST00000620412 PLEKHH2Q8IVE3 1493 aa33.58■■■□□ 2.97
PMPCA-210ENST00000620412 HNRNPMP52272 730 aaKnown RBP eCLIP33.58■■■□□ 2.97
PMPCA-210ENST00000620412 CFDP1Q9UEE9 299 aaPredicted RBP33.56■■■□□ 2.96
PMPCA-210ENST00000620412 APLP2Q06481 763 aa33.54■■■□□ 2.96
PMPCA-210ENST00000620412 KIAA1107Q9UPP5 1409 aa33.53■■■□□ 2.96
PMPCA-210ENST00000620412 ABCA6Q8N139 1617 aa33.53■■■□□ 2.96
PMPCA-210ENST00000620412 FBXO41Q8TF61 875 aa33.51■■■□□ 2.95
PMPCA-210ENST00000620412 ESF1Q9H501 851 aaKnown RBP33.51■■■□□ 2.95
PMPCA-210ENST00000620412 KANK4Q5T7N3 995 aaPredicted RBP33.5■■■□□ 2.95
PMPCA-210ENST00000620412 SPAG9O60271 1321 aaKnown RBP33.5■■■□□ 2.95
PMPCA-210ENST00000620412 REREQ9P2R6 1566 aa33.49■■■□□ 2.95
PMPCA-210ENST00000620412 SYCP2Q9BX26 1530 aa33.48■■■□□ 2.95
PMPCA-210ENST00000620412 AGLP35573 1532 aa33.44■■■□□ 2.94
PMPCA-210ENST00000620412 MIA2Q96PC5 1412 aa33.44■■■□□ 2.94
PMPCA-210ENST00000620412 MYOM3Q5VTT5 1437 aa33.43■■■□□ 2.94
PMPCA-210ENST00000620412 KIDINS220Q9ULH0 1771 aa33.42■■■□□ 2.94
PMPCA-210ENST00000620412 ZNF644Q9H582 1327 aaPredicted RBP33.4■■■□□ 2.94
PMPCA-210ENST00000620412 CAMSAP2Q08AD1 1489 aa33.38■■■□□ 2.93
PMPCA-210ENST00000620412 MBD5Q9P267 1494 aa33.37■■■□□ 2.93
PMPCA-210ENST00000620412 UHRF1BP1Q6BDS2 1440 aa33.36■■■□□ 2.93
PMPCA-210ENST00000620412 ARHGEF5Q12774 1597 aa33.35■■■□□ 2.93
PMPCA-210ENST00000620412 INO80Q9ULG1 1556 aaPredicted RBP33.34■■■□□ 2.93
PMPCA-210ENST00000620412 PREX1Q8TCU6 1659 aa33.32■■■□□ 2.92
PMPCA-210ENST00000620412 CNTLNQ9NXG0 1405 aa33.29■■■□□ 2.92
PMPCA-210ENST00000620412 ATP7AQ04656 1500 aa33.29■■■□□ 2.92
PMPCA-210ENST00000620412 CCDC141Q6ZP82 1450 aa33.28■■■□□ 2.92
PMPCA-210ENST00000620412 CERKQ8TCT0 537 aa33.26■■■□□ 2.91
PMPCA-210ENST00000620412 A2MP01023 1474 aa33.25■■■□□ 2.91
PMPCA-210ENST00000620412 RSPH4AQ5TD94 716 aa33.25■■■□□ 2.91
PMPCA-210ENST00000620412 GGT6Q6P531 493 aa33.25■■■□□ 2.91
PMPCA-210ENST00000620412 DMRT2Q9Y5R5 561 aa33.25■■■□□ 2.91
PMPCA-210ENST00000620412 C3P01024 1663 aa33.25■■■□□ 2.91
PMPCA-210ENST00000620412 TCOF1Q13428 1488 aaKnown RBP33.25■■■□□ 2.91
PMPCA-210ENST00000620412 PTPN23Q9H3S7 1636 aa33.24■■■□□ 2.91
PMPCA-210ENST00000620412 ZMYM3Q14202 1370 aa33.23■■■□□ 2.91
PMPCA-210ENST00000620412 RTEL1-TNFRSF6BF6WH68 1400 aa33.23■■■□□ 2.91
PMPCA-210ENST00000620412 FGD6Q6ZV73 1430 aa33.23■■■□□ 2.91
PMPCA-210ENST00000620412 MAST1Q9Y2H9 1570 aa33.2■■■□□ 2.91
PMPCA-210ENST00000620412 SETD1BQ9UPS6 1966 aaKnown RBP33.19■■■□□ 2.9
PMPCA-210ENST00000620412 ADGBQ8N7X0 1667 aa33.19■■■□□ 2.9
PMPCA-210ENST00000620412 PLXNC1O60486 1568 aa33.16■■■□□ 2.9
PMPCA-210ENST00000620412 CROCC2H7BZ55 1655 aa33.16■■■□□ 2.9
PMPCA-210ENST00000620412 DNMT1P26358 1616 aaKnown RBP33.12■■■□□ 2.89
PMPCA-210ENST00000620412 SHANK2Q9UPX8 1470 aa33.12■■■□□ 2.89
PMPCA-210ENST00000620412 NPATQ14207 1427 aa33.11■■■□□ 2.89
PMPCA-210ENST00000620412 STRCQ7RTU9 1775 aa33.11■■■□□ 2.89
PMPCA-210ENST00000620412 DHX29Q7Z478 1369 aaKnown RBP33.09■■■□□ 2.89
PMPCA-210ENST00000620412 PPP6R1Q9UPN7 881 aa33.08■■■□□ 2.89
PMPCA-210ENST00000620412 MROH2AA6NES4 1674 aa33.05■■■□□ 2.88
PMPCA-210ENST00000620412 PTPRTO14522 1441 aa33.04■■■□□ 2.88
PMPCA-210ENST00000620412 KIF3BO15066 747 aa33.04■■■□□ 2.88
PMPCA-210ENST00000620412 CLTCQ00610 1675 aaKnown RBP33.04■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms