RNA–Protein interactions for RNA: ENST00000618836.4

UBE2D3-233, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-233ENST00000618836 DHX37Q8IY37 1157 aaKnown RBP6.12□□□□□ -1.43
UBE2D3-233ENST00000618836 SUPT5HO00267 1087 aaKnown RBP6.12□□□□□ -1.43
UBE2D3-233ENST00000618836 HMGB1P09429 215 aaKnown RBP6.12□□□□□ -1.43
UBE2D3-233ENST00000618836 TTC37Q6PGP7 1564 aa6.12□□□□□ -1.43
UBE2D3-233ENST00000618836 CFAP43Q8NDM7 1665 aa6.11□□□□□ -1.43
UBE2D3-233ENST00000618836 VASPP50552 380 aaPredicted RBP6.11□□□□□ -1.43
UBE2D3-233ENST00000618836 RSPH4AQ5TD94 716 aa6.11□□□□□ -1.43
UBE2D3-233ENST00000618836 TOPBP1Q92547 1522 aa6.11□□□□□ -1.43
UBE2D3-233ENST00000618836 NUP160Q12769 1436 aa6.11□□□□□ -1.43
UBE2D3-233ENST00000618836 IGSF3O75054 1194 aa6.11□□□□□ -1.43
UBE2D3-233ENST00000618836 PROM2Q8N271 834 aa6.09□□□□□ -1.43
UBE2D3-233ENST00000618836 SLC34A2O95436 690 aa6.09□□□□□ -1.43
UBE2D3-233ENST00000618836 BCL11BQ9C0K0 894 aaPredicted RBP6.09□□□□□ -1.43
UBE2D3-233ENST00000618836 KIF21BO75037 1637 aa6.08□□□□□ -1.44
UBE2D3-233ENST00000618836 PUS7Q96PZ0 661 aaKnown RBP6.08□□□□□ -1.44
UBE2D3-233ENST00000618836 BCCIPQ9P287 314 aaKnown RBP eCLIP6.08□□□□□ -1.44
UBE2D3-233ENST00000618836 POLA2Q14181 598 aa6.07□□□□□ -1.44
UBE2D3-233ENST00000618836 ABCA5Q8WWZ7 1642 aa6.07□□□□□ -1.44
UBE2D3-233ENST00000618836 ABCB7O75027 752 aa6.06□□□□□ -1.44
UBE2D3-233ENST00000618836 ANO8Q9HCE9 1232 aaPredicted RBP6.05□□□□□ -1.44
UBE2D3-233ENST00000618836 TSPOAP1O95153 1857 aa6.05□□□□□ -1.44
UBE2D3-233ENST00000618836 TEX14Q8IWB6 1497 aa6.05□□□□□ -1.44
UBE2D3-233ENST00000618836 RSPH6AQ9H0K4 717 aa6.04□□□□□ -1.44
UBE2D3-233ENST00000618836 COL17A1Q9UMD9 1497 aaPredicted RBP6.04□□□□□ -1.44
UBE2D3-233ENST00000618836 MADDQ8WXG6 1647 aa6.03□□□□□ -1.44
UBE2D3-233ENST00000618836 RGL2O15211 777 aa6.02□□□□□ -1.45
UBE2D3-233ENST00000618836 ANP32EQ9BTT0 268 aa6.02□□□□□ -1.45
UBE2D3-233ENST00000618836 ALKQ9UM73 1620 aa6.02□□□□□ -1.45
UBE2D3-233ENST00000618836 ARAP3Q8WWN8 1544 aa6.02□□□□□ -1.45
UBE2D3-233ENST00000618836 MAGI3Q5TCQ9 1506 aa6.01□□□□□ -1.45
UBE2D3-233ENST00000618836 UHRF1BP1LA0JNW5 1464 aa6□□□□□ -1.45
UBE2D3-233ENST00000618836 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6□□□□□ -1.45
UBE2D3-233ENST00000618836 NHSL1Q5SYE7 1610 aa6□□□□□ -1.45
UBE2D3-233ENST00000618836 CCDC9Q9Y3X0 531 aaKnown RBP6□□□□□ -1.45
UBE2D3-233ENST00000618836 AAMPQ13685 434 aa5.99□□□□□ -1.45
UBE2D3-233ENST00000618836 ZNF326Q5BKZ1 582 aaKnown RBP5.99□□□□□ -1.45
UBE2D3-233ENST00000618836 ADAMTS12P58397 1594 aa5.98□□□□□ -1.45
UBE2D3-233ENST00000618836 GRIN2BQ13224 1484 aa5.97□□□□□ -1.45
UBE2D3-233ENST00000618836 MROH2BQ7Z745 1585 aa5.96□□□□□ -1.45
UBE2D3-233ENST00000618836 CUX1P39880 1505 aa5.96□□□□□ -1.45
UBE2D3-233ENST00000618836 ZNF142P52746 1687 aaPredicted RBP5.96□□□□□ -1.45
UBE2D3-233ENST00000618836 TSHZ2Q9NRE2 1034 aa5.96□□□□□ -1.46
UBE2D3-233ENST00000618836 CDK12Q9NYV4 1490 aaPredicted RBP5.96□□□□□ -1.46
UBE2D3-233ENST00000618836 RUSC2Q8N2Y8 1516 aa5.95□□□□□ -1.46
UBE2D3-233ENST00000618836 RIMS1Q86UR5 1692 aaKnown RBP5.95□□□□□ -1.46
UBE2D3-233ENST00000618836 RNF25Q96BH1 459 aaPredicted RBP5.94□□□□□ -1.46
UBE2D3-233ENST00000618836 PLB1Q6P1J6 1458 aa5.94□□□□□ -1.46
UBE2D3-233ENST00000618836 ERICH6BQ5W0A0 696 aa5.94□□□□□ -1.46
UBE2D3-233ENST00000618836 FRMPD1Q5SYB0 1578 aa5.93□□□□□ -1.46
UBE2D3-233ENST00000618836 CAPN15O75808 1086 aa5.93□□□□□ -1.46
UBE2D3-233ENST00000618836 ARHGEF40Q8TER5 1519 aa5.92□□□□□ -1.46
UBE2D3-233ENST00000618836 SETD1AO15047 1707 aaKnown RBP5.92□□□□□ -1.46
UBE2D3-233ENST00000618836 YEATS2Q9ULM3 1422 aa5.92□□□□□ -1.46
UBE2D3-233ENST00000618836 POLA1P09884 1462 aaPredicted RBP5.91□□□□□ -1.46
UBE2D3-233ENST00000618836 PAXIP1Q6ZW49 1069 aaPredicted RBP5.91□□□□□ -1.46
UBE2D3-233ENST00000618836 CFAP44Q96MT7 982 aa5.91□□□□□ -1.46
UBE2D3-233ENST00000618836 ARID3AQ99856 593 aa5.91□□□□□ -1.46
UBE2D3-233ENST00000618836 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.91□□□□□ -1.46
UBE2D3-233ENST00000618836 HNRNPUL2Q1KMD3 747 aaKnown RBP5.91□□□□□ -1.46
UBE2D3-233ENST00000618836 RNF39Q9H2S5 420 aa5.91□□□□□ -1.46
UBE2D3-233ENST00000618836 RAPGEF6Q8TEU7 1601 aa5.91□□□□□ -1.46
UBE2D3-233ENST00000618836 TICAM2Q86XR7 235 aa5.91□□□□□ -1.46
UBE2D3-233ENST00000618836 GRIN2AQ12879 1464 aa5.9□□□□□ -1.46
UBE2D3-233ENST00000618836 ZMYM4Q5VZL5 1548 aa5.9□□□□□ -1.47
UBE2D3-233ENST00000618836 AQRO60306 1485 aaKnown RBP eCLIP5.89□□□□□ -1.472e-7■■■□□ 15.8
UBE2D3-233ENST00000618836 ARHGEF12Q9NZN5 1544 aa5.88□□□□□ -1.47
UBE2D3-233ENST00000618836 NECTIN2Q92692 538 aa5.87□□□□□ -1.47
UBE2D3-233ENST00000618836 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.87□□□□□ -1.47
UBE2D3-233ENST00000618836 KDM5BQ9UGL1 1544 aa5.87□□□□□ -1.47
UBE2D3-233ENST00000618836 CHRM1P11229 460 aaPredicted RBP5.87□□□□□ -1.47
UBE2D3-233ENST00000618836 NKX1-1Q15270 411 aaPredicted RBP5.87□□□□□ -1.47
UBE2D3-233ENST00000618836 CUL7Q14999 1698 aa5.87□□□□□ -1.47
UBE2D3-233ENST00000618836 PHLDB1Q86UU1 1377 aa5.86□□□□□ -1.47
UBE2D3-233ENST00000618836 SIGLEC1Q9BZZ2 1709 aa5.86□□□□□ -1.47
UBE2D3-233ENST00000618836 CCDC136Q96JN2 1154 aa5.86□□□□□ -1.47
UBE2D3-233ENST00000618836 ABCC2Q92887 1545 aa5.86□□□□□ -1.47
UBE2D3-233ENST00000618836 SYNMO15061 1565 aa5.86□□□□□ -1.47
UBE2D3-233ENST00000618836 CPS1P31327 1500 aa5.86□□□□□ -1.47
UBE2D3-233ENST00000618836 ECM2O94769 699 aaPredicted RBP5.86□□□□□ -1.47
UBE2D3-233ENST00000618836 ZEB1P37275 1124 aaPredicted RBP5.86□□□□□ -1.47
UBE2D3-233ENST00000618836 NAP1L5Q96NT1 182 aaPredicted RBP5.85□□□□□ -1.47
UBE2D3-233ENST00000618836 REREQ9P2R6 1566 aa5.85□□□□□ -1.47
UBE2D3-233ENST00000618836 MROH2AA6NES4 1674 aa5.85□□□□□ -1.47
UBE2D3-233ENST00000618836 CLSTN1O94985 981 aa5.84□□□□□ -1.47
UBE2D3-233ENST00000618836 ZBTB7CA1YPR0 619 aa5.84□□□□□ -1.47
UBE2D3-233ENST00000618836 RBM10P98175 930 aaKnown RBP5.84□□□□□ -1.47
UBE2D3-233ENST00000618836 BRPF3Q9ULD4 1205 aa5.83□□□□□ -1.48
UBE2D3-233ENST00000618836 RICTORQ6R327 1708 aa5.83□□□□□ -1.48
UBE2D3-233ENST00000618836 KDM5CP41229 1560 aa5.83□□□□□ -1.48
UBE2D3-233ENST00000618836 CC2D2BQ6DHV5 1058 aa5.83□□□□□ -1.48
UBE2D3-233ENST00000618836 CLSPNQ9HAW4 1339 aa5.82□□□□□ -1.48
UBE2D3-233ENST00000618836 RNF17Q9BXT8 1623 aaKnown RBP5.82□□□□□ -1.48
UBE2D3-233ENST00000618836 POLR3GLQ9BT43 218 aa5.82□□□□□ -1.48
UBE2D3-233ENST00000618836 ZNF692Q9BU19 519 aaPredicted RBP5.82□□□□□ -1.48
UBE2D3-233ENST00000618836 SALL2Q9Y467 1007 aaPredicted RBP5.82□□□□□ -1.48
UBE2D3-233ENST00000618836 TOP2AP11388 1531 aaKnown RBP5.81□□□□□ -1.48
UBE2D3-233ENST00000618836 KIAA0556O60303 1618 aa5.81□□□□□ -1.48
UBE2D3-233ENST00000618836 CHGAP10645 457 aaKnown RBP5.81□□□□□ -1.48
UBE2D3-233ENST00000618836 DSG3P32926 999 aa5.81□□□□□ -1.48
UBE2D3-233ENST00000618836 RGS22Q8NE09 1264 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms