RNA–Protein interactions for RNA: ENST00000618771.1

TRAF4-217, Transcript of TNF receptor associated factor 4, humanhuman

TSL 5 BASIC

Gene TRAF4, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-217ENST00000618771 BCORL1Q5H9F3 1711 aa35.36■■■■□ 3.25
TRAF4-217ENST00000618771 MADDQ8WXG6 1647 aa35.3■■■■□ 3.24
TRAF4-217ENST00000618771 ARHGEF40Q8TER5 1519 aa35.27■■■■□ 3.24
TRAF4-217ENST00000618771 CEP162Q5TB80 1403 aa35.25■■■■□ 3.23
TRAF4-217ENST00000618771 ZMYM4Q5VZL5 1548 aa35.24■■■■□ 3.23
TRAF4-217ENST00000618771 ARHGAP5Q13017 1502 aa35.22■■■■□ 3.23
TRAF4-217ENST00000618771 EFCAB2Q5VUJ9 269 aa35.22■■■■□ 3.23
TRAF4-217ENST00000618771 CDC42BPBQ9Y5S2 1711 aa35.21■■■■□ 3.23
TRAF4-217ENST00000618771 SCAPERQ9BY12 1400 aa35.21■■■■□ 3.23
TRAF4-217ENST00000618771 PREX2Q70Z35 1606 aa35.18■■■■□ 3.22
TRAF4-217ENST00000618771 POGZQ7Z3K3 1410 aa35.18■■■■□ 3.22
TRAF4-217ENST00000618771 RIMS1Q86UR5 1692 aaKnown RBP35.17■■■■□ 3.22
TRAF4-217ENST00000618771 ZFYVE16Q7Z3T8 1539 aa35.14■■■■□ 3.22
TRAF4-217ENST00000618771 CDC42BPAQ5VT25 1732 aa35.14■■■■□ 3.22
TRAF4-217ENST00000618771 YEATS2Q9ULM3 1422 aa35.12■■■■□ 3.21
TRAF4-217ENST00000618771 MAGI2Q86UL8 1455 aa35.11■■■■□ 3.21
TRAF4-217ENST00000618771 LMTK3Q96Q04 1460 aa35.11■■■■□ 3.21
TRAF4-217ENST00000618771 FBXO41Q8TF61 875 aa35.11■■■■□ 3.21
TRAF4-217ENST00000618771 PLPPR3Q6T4P5 718 aa35.09■■■■□ 3.21
TRAF4-217ENST00000618771 LOC105371045A0A1W2PR82 267 aa35.07■■■■□ 3.2
TRAF4-217ENST00000618771 SIGLEC1Q9BZZ2 1709 aa35.06■■■■□ 3.2
TRAF4-217ENST00000618771 ZNF518AQ6AHZ1 1483 aa35.04■■■■□ 3.2
TRAF4-217ENST00000618771 MLECQ14165 292 aa35.03■■■■□ 3.2
TRAF4-217ENST00000618771 ABCC1P33527 1531 aa35.01■■■■□ 3.2
TRAF4-217ENST00000618771 KDM5CP41229 1560 aa35■■■■□ 3.19
TRAF4-217ENST00000618771 MTUS2Q5JR59 1369 aa35■■■■□ 3.19
TRAF4-217ENST00000618771 ITSN2Q9NZM3 1697 aa34.99■■■■□ 3.19
TRAF4-217ENST00000618771 HSPA2P54652 639 aa34.98■■■■□ 3.19
TRAF4-217ENST00000618771 EHBP1L1Q8N3D4 1523 aa34.95■■■■□ 3.19
TRAF4-217ENST00000618771 GPATCH8Q9UKJ3 1502 aaKnown RBP34.95■■■■□ 3.19
TRAF4-217ENST00000618771 AFAP1Q8N556 730 aa34.93■■■■□ 3.18
TRAF4-217ENST00000618771 FER1L4A9Z1Z3 1794 aa34.92■■■■□ 3.18
TRAF4-217ENST00000618771 ARHGEF12Q9NZN5 1544 aa34.92■■■■□ 3.18
TRAF4-217ENST00000618771 ATP10AO60312 1499 aa34.91■■■■□ 3.18
TRAF4-217ENST00000618771 SAMD9LQ8IVG5 1584 aa34.91■■■■□ 3.18
TRAF4-217ENST00000618771 C9orf84Q5VXU9 1444 aa34.89■■■■□ 3.18
TRAF4-217ENST00000618771 TRAPPC8Q9Y2L5 1435 aa34.88■■■■□ 3.17
TRAF4-217ENST00000618771 CCNB3Q8WWL7 1395 aa34.87■■■■□ 3.17
TRAF4-217ENST00000618771 VPS8Q8N3P4 1428 aa34.86■■■■□ 3.17
TRAF4-217ENST00000618771 ZNF777Q9ULD5 760 aaPredicted RBP34.85■■■■□ 3.17
TRAF4-217ENST00000618771 MLH3Q9UHC1 1453 aa34.84■■■■□ 3.17
TRAF4-217ENST00000618771 DIP2CQ9Y2E4 1556 aa34.84■■■■□ 3.17
TRAF4-217ENST00000618771 TIAM1Q13009 1591 aa34.83■■■■□ 3.17
TRAF4-217ENST00000618771 SYCP2Q9BX26 1530 aa34.83■■■■□ 3.17
TRAF4-217ENST00000618771 MYT1LQ9UL68 1186 aa34.83■■■■□ 3.17
TRAF4-217ENST00000618771 ABCA6Q8N139 1617 aa34.83■■■■□ 3.17
TRAF4-217ENST00000618771 CFDP1Q9UEE9 299 aaPredicted RBP34.81■■■■□ 3.16
TRAF4-217ENST00000618771 SUPT6HQ7KZ85 1726 aaKnown RBP34.79■■■■□ 3.16
TRAF4-217ENST00000618771 KIDINS220Q9ULH0 1771 aa34.79■■■■□ 3.16
TRAF4-217ENST00000618771 PLEKHH2Q8IVE3 1493 aa34.78■■■■□ 3.16
TRAF4-217ENST00000618771 REREQ9P2R6 1566 aa34.77■■■■□ 3.16
TRAF4-217ENST00000618771 KIAA1107Q9UPP5 1409 aa34.74■■■■□ 3.15
TRAF4-217ENST00000618771 CEBPAP49715 358 aaPredicted RBP34.74■■■■□ 3.15
TRAF4-217ENST00000618771 NCOA2Q15596 1464 aa34.71■■■■□ 3.15
TRAF4-217ENST00000618771 HNRNPMP52272 730 aaKnown RBP eCLIP34.7■■■■□ 3.15
TRAF4-217ENST00000618771 PREX1Q8TCU6 1659 aa34.67■■■■□ 3.14
TRAF4-217ENST00000618771 LRRC9Q6ZRR7 1453 aa34.65■■■■□ 3.14
TRAF4-217ENST00000618771 CERKQ8TCT0 537 aa34.64■■■■□ 3.14
TRAF4-217ENST00000618771 INO80Q9ULG1 1556 aaPredicted RBP34.64■■■■□ 3.14
TRAF4-217ENST00000618771 AGLP35573 1532 aa34.64■■■■□ 3.14
TRAF4-217ENST00000618771 MAP3K1Q13233 1512 aa34.64■■■■□ 3.14
TRAF4-217ENST00000618771 SPAG9O60271 1321 aaKnown RBP34.63■■■■□ 3.13
TRAF4-217ENST00000618771 ATP7AQ04656 1500 aa34.63■■■■□ 3.13
TRAF4-217ENST00000618771 ZNF644Q9H582 1327 aaPredicted RBP34.61■■■■□ 3.13
TRAF4-217ENST00000618771 MBD5Q9P267 1494 aa34.56■■■■□ 3.12
TRAF4-217ENST00000618771 SETD1BQ9UPS6 1966 aaKnown RBP34.56■■■■□ 3.12
TRAF4-217ENST00000618771 UHRF1BP1Q6BDS2 1440 aa34.54■■■■□ 3.12
TRAF4-217ENST00000618771 CAMSAP2Q08AD1 1489 aa34.53■■■■□ 3.12
TRAF4-217ENST00000618771 ESF1Q9H501 851 aaKnown RBP34.51■■■■□ 3.12
TRAF4-217ENST00000618771 KANK4Q5T7N3 995 aaPredicted RBP34.5■■■■□ 3.11
TRAF4-217ENST00000618771 ADGBQ8N7X0 1667 aa34.5■■■■□ 3.11
TRAF4-217ENST00000618771 STRCQ7RTU9 1775 aa34.49■■■■□ 3.11
TRAF4-217ENST00000618771 PLXNC1O60486 1568 aa34.49■■■■□ 3.11
TRAF4-217ENST00000618771 C3P01024 1663 aa34.48■■■■□ 3.11
TRAF4-217ENST00000618771 DMRT2Q9Y5R5 561 aa34.48■■■■□ 3.11
TRAF4-217ENST00000618771 A2MP01023 1474 aa34.46■■■■□ 3.11
TRAF4-217ENST00000618771 CCDC141Q6ZP82 1450 aa34.46■■■■□ 3.11
TRAF4-217ENST00000618771 RTEL1-TNFRSF6BF6WH68 1400 aa34.42■■■■□ 3.1
TRAF4-217ENST00000618771 APLP2Q06481 763 aa34.41■■■■□ 3.1
TRAF4-217ENST00000618771 ARHGEF5Q12774 1597 aa34.4■■■■□ 3.1
TRAF4-217ENST00000618771 RSPH4AQ5TD94 716 aa34.37■■■■□ 3.09
TRAF4-217ENST00000618771 MYOM3Q5VTT5 1437 aa34.37■■■■□ 3.09
TRAF4-217ENST00000618771 CNTLNQ9NXG0 1405 aa34.37■■■■□ 3.09
TRAF4-217ENST00000618771 MROH2AA6NES4 1674 aa34.35■■■■□ 3.09
TRAF4-217ENST00000618771 MIA2Q96PC5 1412 aa34.33■■■■□ 3.09
TRAF4-217ENST00000618771 PTPRTO14522 1441 aa34.3■■■■□ 3.08
TRAF4-217ENST00000618771 CLTCQ00610 1675 aaKnown RBP34.29■■■■□ 3.08
TRAF4-217ENST00000618771 DHX29Q7Z478 1369 aaKnown RBP34.26■■■■□ 3.08
TRAF4-217ENST00000618771 TSPY4P0CV99 314 aa34.24■■■■□ 3.07
TRAF4-217ENST00000618771 TSPY10P0CW01 314 aa34.24■■■■□ 3.07
TRAF4-217ENST00000618771 MAST1Q9Y2H9 1570 aa34.23■■■■□ 3.07
TRAF4-217ENST00000618771 GGT6Q6P531 493 aa34.23■■■■□ 3.07
TRAF4-217ENST00000618771 ZMYM3Q14202 1370 aa34.22■■■■□ 3.07
TRAF4-217ENST00000618771 NCOA1Q15788 1441 aa34.21■■■■□ 3.07
TRAF4-217ENST00000618771 PTPN23Q9H3S7 1636 aa34.2■■■■□ 3.07
TRAF4-217ENST00000618771 NPATQ14207 1427 aa34.19■■■■□ 3.06
TRAF4-217ENST00000618771 PPP6R1Q9UPN7 881 aa34.16■■■■□ 3.06
TRAF4-217ENST00000618771 KIF3BO15066 747 aa34.14■■■■□ 3.06
TRAF4-217ENST00000618771 CROCC2H7BZ55 1655 aa34.14■■■■□ 3.06
TRAF4-217ENST00000618771 CAMSAP1Q5T5Y3 1602 aa34.14■■■■□ 3.06
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms