RNA–Protein interactions for RNA: ENST00000615671.1

GABPB1-212, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

Gene GABPB1, Length 6,266 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-212ENST00000615671 KIF27Q86VH2 1401 aa23.88■■□□□ 1.41
GABPB1-212ENST00000615671 ANO8Q9HCE9 1232 aaPredicted RBP23.88■■□□□ 1.41
GABPB1-212ENST00000615671 RB1CC1Q8TDY2 1594 aa23.87■■□□□ 1.41
GABPB1-212ENST00000615671 WRNQ14191 1432 aaPredicted RBP eCLIP23.87■■□□□ 1.41
GABPB1-212ENST00000615671 HSCBQ8IWL3 235 aa23.86■■□□□ 1.41
GABPB1-212ENST00000615671 CHMP4BQ9H444 224 aaKnown RBP23.86■■□□□ 1.41
GABPB1-212ENST00000615671 TMX4Q9H1E5 349 aaPredicted RBP23.86■■□□□ 1.41
GABPB1-212ENST00000615671 PRM3Q9NNZ6 103 aa23.85■■□□□ 1.41
GABPB1-212ENST00000615671 NUTM2FA1L443 756 aa23.84■■□□□ 1.41
GABPB1-212ENST00000615671 MCCP23508 829 aa23.83■■□□□ 1.41
GABPB1-212ENST00000615671 HDGFL2Q7Z4V5 671 aaPredicted RBP23.83■■□□□ 1.41
GABPB1-212ENST00000615671 MS4A1P11836 297 aa23.83■■□□□ 1.4
GABPB1-212ENST00000615671 G3V3G9 751 aa23.82■■□□□ 1.4
GABPB1-212ENST00000615671 DCAF8Q5TAQ9 597 aa23.82■■□□□ 1.4
GABPB1-212ENST00000615671 PPP4R2Q9NY27 417 aa23.79■■□□□ 1.4
GABPB1-212ENST00000615671 LTV1Q96GA3 475 aaPredicted RBP23.79■■□□□ 1.4
GABPB1-212ENST00000615671 MYO15BQ96JP2 1530 aa23.77■■□□□ 1.4
GABPB1-212ENST00000615671 GORABQ5T7V8 394 aa23.77■■□□□ 1.4
GABPB1-212ENST00000615671 TAF7LQ5H9L4 462 aa23.77■■□□□ 1.4
GABPB1-212ENST00000615671 ITPRIPQ8IWB1 547 aa23.76■■□□□ 1.39
GABPB1-212ENST00000615671 U2AF1L5P0DN76 240 aaPredicted RBP23.75■■□□□ 1.39
GABPB1-212ENST00000615671 U2AF1Q01081 240 aaKnown RBP eCLIP23.75■■□□□ 1.39
GABPB1-212ENST00000615671 NRDCO43847 1150 aa23.75■■□□□ 1.39
GABPB1-212ENST00000615671 KIAA1211Q6ZU35 1233 aa23.75■■□□□ 1.39
GABPB1-212ENST00000615671 NOP58Q9Y2X3 529 aaKnown RBP23.74■■□□□ 1.39
GABPB1-212ENST00000615671 HSP90B1P14625 803 aaKnown RBP23.74■■□□□ 1.39
GABPB1-212ENST00000615671 PKD2Q13563 968 aa23.71■■□□□ 1.39
GABPB1-212ENST00000615671 ARID3AQ99856 593 aa23.69■■□□□ 1.38
GABPB1-212ENST00000615671 NOL8Q76FK4 1167 aaKnown RBP23.69■■□□□ 1.38
GABPB1-212ENST00000615671 SLC4A10Q6U841 1118 aa23.68■■□□□ 1.38
GABPB1-212ENST00000615671 CREBRFQ8IUR6 639 aa23.68■■□□□ 1.38
GABPB1-212ENST00000615671 HSPA5P11021 654 aaKnown RBP23.67■■□□□ 1.38
GABPB1-212ENST00000615671 MSH5O43196 834 aa23.66■■□□□ 1.38
GABPB1-212ENST00000615671 VPS53Q5VIR6 699 aa23.66■■□□□ 1.38
GABPB1-212ENST00000615671 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.66■■□□□ 1.38
GABPB1-212ENST00000615671 CEP164Q9UPV0 1460 aa23.65■■□□□ 1.38
GABPB1-212ENST00000615671 TRIM6-TRIM34B2RNG4 842 aa23.64■■□□□ 1.38
GABPB1-212ENST00000615671 EEA1Q15075 1411 aa23.64■■□□□ 1.38
GABPB1-212ENST00000615671 NOC3LQ8WTT2 800 aaKnown RBP23.64■■□□□ 1.38
GABPB1-212ENST00000615671 ROCK2O75116 1388 aaKnown RBP23.64■■□□□ 1.37
GABPB1-212ENST00000615671 NGDNQ8NEJ9 315 aaKnown RBP23.64■■□□□ 1.37
GABPB1-212ENST00000615671 CHAF1AQ13111 956 aaPredicted RBP23.64■■□□□ 1.37
GABPB1-212ENST00000615671 CCDC146Q8IYE0 955 aa23.64■■□□□ 1.37
GABPB1-212ENST00000615671 FRAT2O75474 233 aaPredicted RBP23.63■■□□□ 1.37
GABPB1-212ENST00000615671 KIAA2012Q0VF49 1180 aa23.63■■□□□ 1.37
GABPB1-212ENST00000615671 GZF1Q9H116 711 aaPredicted RBP23.63■■□□□ 1.37
GABPB1-212ENST00000615671 MSNP26038 577 aaKnown RBP23.62■■□□□ 1.37
GABPB1-212ENST00000615671 TOMM22Q9NS69 142 aa23.62■■□□□ 1.37
GABPB1-212ENST00000615671 CUX2O14529 1486 aa23.62■■□□□ 1.37
GABPB1-212ENST00000615671 GTF2E1P29083 439 aaPredicted RBP23.61■■□□□ 1.37
GABPB1-212ENST00000615671 FOXD4L1Q9NU39 408 aa23.61■■□□□ 1.37
GABPB1-212ENST00000615671 KTN1Q86UP2 1357 aaKnown RBP23.59■■□□□ 1.37
GABPB1-212ENST00000615671 RASSF8Q8NHQ8 419 aa23.59■■□□□ 1.37
GABPB1-212ENST00000615671 IPO8O15397 1037 aaKnown RBP23.58■■□□□ 1.36
GABPB1-212ENST00000615671 STK31Q9BXU1 1019 aa23.58■■□□□ 1.36
GABPB1-212ENST00000615671 SPAG9O60271 1321 aaKnown RBP23.58■■□□□ 1.36
GABPB1-212ENST00000615671 KIF3BO15066 747 aa23.57■■□□□ 1.36
GABPB1-212ENST00000615671 CARMIL1Q5VZK9 1371 aa23.57■■□□□ 1.36
GABPB1-212ENST00000615671 AMPHP49418 695 aa23.57■■□□□ 1.36
GABPB1-212ENST00000615671 EID1Q9Y6B2 187 aa23.56■■□□□ 1.36
GABPB1-212ENST00000615671 MFAP1P55081 439 aaKnown RBP23.55■■□□□ 1.36
GABPB1-212ENST00000615671 SLKQ9H2G2 1235 aaPredicted RBP23.55■■□□□ 1.36
GABPB1-212ENST00000615671 HNRNPMP52272 730 aaKnown RBP eCLIP23.54■■□□□ 1.36
GABPB1-212ENST00000615671 CLUAP1Q96AJ1 413 aa23.53■■□□□ 1.36
GABPB1-212ENST00000615671 TNIKQ9UKE5 1360 aa23.53■■□□□ 1.36
GABPB1-212ENST00000615671 WWC1Q8IX03 1113 aa23.53■■□□□ 1.36
GABPB1-212ENST00000615671 SMC4Q9NTJ3 1288 aa23.52■■□□□ 1.36
GABPB1-212ENST00000615671 FOXD4L5Q5VV16 416 aaPredicted RBP23.52■■□□□ 1.36
GABPB1-212ENST00000615671 FOXD4L4Q8WXT5 416 aaPredicted RBP23.52■■□□□ 1.36
GABPB1-212ENST00000615671 RAD21O60216 631 aa23.52■■□□□ 1.36
GABPB1-212ENST00000615671 NGEFQ8N5V2 710 aa23.51■■□□□ 1.35
GABPB1-212ENST00000615671 KLHL34Q8N239 644 aa23.5■■□□□ 1.35
GABPB1-212ENST00000615671 GPATCH3Q96I76 525 aa23.49■■□□□ 1.35
GABPB1-212ENST00000615671 EVA1CP58658 441 aa23.49■■□□□ 1.35
GABPB1-212ENST00000615671 NUP155O75694 1391 aa23.48■■□□□ 1.35
GABPB1-212ENST00000615671 MARCH6O60337 910 aa23.48■■□□□ 1.35
GABPB1-212ENST00000615671 FHAD1B1AJZ9 1412 aa23.48■■□□□ 1.35
GABPB1-212ENST00000615671 CALD1Q05682 793 aaKnown RBP23.47■■□□□ 1.35
GABPB1-212ENST00000615671 ARHGAP35Q9NRY4 1499 aa23.47■■□□□ 1.35
GABPB1-212ENST00000615671 WASHC2CQ9Y4E1 1318 aa23.46■■□□□ 1.35
GABPB1-212ENST00000615671 MEX3CQ5U5Q3 659 aaKnown RBP23.46■■□□□ 1.35
GABPB1-212ENST00000615671 RRP7AQ9Y3A4 280 aaKnown RBP23.45■■□□□ 1.34
GABPB1-212ENST00000615671 TRAK1Q9UPV9 953 aa23.44■■□□□ 1.34
GABPB1-212ENST00000615671 RWDD1Q9H446 243 aaPredicted RBP23.44■■□□□ 1.34
GABPB1-212ENST00000615671 L1TD1Q5T7N2 865 aaKnown RBP23.43■■□□□ 1.34
GABPB1-212ENST00000615671 FBXW7Q969H0 707 aa23.43■■□□□ 1.34
GABPB1-212ENST00000615671 RCAN3Q9UKA8 241 aa23.43■■□□□ 1.34
GABPB1-212ENST00000615671 AEBP2Q6ZN18 517 aaPredicted RBP23.43■■□□□ 1.34
GABPB1-212ENST00000615671 FBXO3Q9UK99 471 aa23.43■■□□□ 1.34
GABPB1-212ENST00000615671 A0A0U1RQG5 324 aaPredicted RBP23.42■■□□□ 1.34
GABPB1-212ENST00000615671 SYTL4Q96C24 671 aaPredicted RBP23.41■■□□□ 1.34
GABPB1-212ENST00000615671 EFCAB2Q5VUJ9 269 aa23.41■■□□□ 1.34
GABPB1-212ENST00000615671 ELL2O00472 640 aaPredicted RBP23.4■■□□□ 1.34
GABPB1-212ENST00000615671 CARMIL2Q6F5E8 1435 aa23.4■■□□□ 1.34
GABPB1-212ENST00000615671 MPHOSPH9Q99550 1183 aa23.4■■□□□ 1.34
GABPB1-212ENST00000615671 SOGA1O94964 1423 aa23.39■■□□□ 1.34
GABPB1-212ENST00000615671 KANK4Q5T7N3 995 aaPredicted RBP23.39■■□□□ 1.34
GABPB1-212ENST00000615671 TERF2IPQ9NYB0 399 aa23.39■■□□□ 1.34
GABPB1-212ENST00000615671 CCDC180Q9P1Z9 1646 aa23.39■■□□□ 1.33
GABPB1-212ENST00000615671 SETD5Q9C0A6 1442 aa23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms