RNA–Protein interactions for RNA: ENST00000614565.4

CDH4-203, Transcript of cadherin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH4, Length 6,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-203ENST00000614565 CHMP3Q9Y3E7 222 aa16.53■□□□□ 0.24
CDH4-203ENST00000614565 KIF27Q86VH2 1401 aa16.52■□□□□ 0.24
CDH4-203ENST00000614565 CUX2O14529 1486 aa16.52■□□□□ 0.23
CDH4-203ENST00000614565 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.52■□□□□ 0.23
CDH4-203ENST00000614565 RTF1Q92541 710 aaKnown RBP16.52■□□□□ 0.23
CDH4-203ENST00000614565 EFCAB2Q5VUJ9 269 aa16.51■□□□□ 0.23
CDH4-203ENST00000614565 FBXW7Q969H0 707 aa16.5■□□□□ 0.23
CDH4-203ENST00000614565 DCAF11Q8TEB1 546 aa16.5■□□□□ 0.23
CDH4-203ENST00000614565 HNRNPMP52272 730 aaKnown RBP eCLIP16.5■□□□□ 0.23
CDH4-203ENST00000614565 NUDCQ9Y266 331 aa16.49■□□□□ 0.23
CDH4-203ENST00000614565 USP35Q9P2H5 1018 aa16.48■□□□□ 0.23
CDH4-203ENST00000614565 ATF3P18847 181 aa16.48■□□□□ 0.23
CDH4-203ENST00000614565 UPF2Q9HAU5 1272 aaKnown RBP16.48■□□□□ 0.23
CDH4-203ENST00000614565 MRS2Q9HD23 443 aa16.46■□□□□ 0.23
CDH4-203ENST00000614565 BICRAQ9NZM4 1560 aa16.46■□□□□ 0.23
CDH4-203ENST00000614565 KRI1Q8N9T8 703 aaKnown RBP16.45■□□□□ 0.22
CDH4-203ENST00000614565 FOXD1Q16676 465 aa16.45■□□□□ 0.22
CDH4-203ENST00000614565 FRAT2O75474 233 aaPredicted RBP16.44■□□□□ 0.22
CDH4-203ENST00000614565 HDGFL2Q7Z4V5 671 aaPredicted RBP16.44■□□□□ 0.22
CDH4-203ENST00000614565 CDCA8Q53HL2 280 aa16.44■□□□□ 0.22
CDH4-203ENST00000614565 TAF7LQ5H9L4 462 aa16.43■□□□□ 0.22
CDH4-203ENST00000614565 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.43■□□□□ 0.22
CDH4-203ENST00000614565 VPS8Q8N3P4 1428 aa16.42■□□□□ 0.22
CDH4-203ENST00000614565 CWC22Q9HCG8 908 aaKnown RBP16.42■□□□□ 0.22
CDH4-203ENST00000614565 FGD1P98174 961 aa16.42■□□□□ 0.22
CDH4-203ENST00000614565 FTSJ3Q8IY81 847 aaKnown RBP16.42■□□□□ 0.22
CDH4-203ENST00000614565 RAPGEF2Q9Y4G8 1499 aa16.42■□□□□ 0.22
CDH4-203ENST00000614565 JPH4Q96JJ6 628 aa16.42■□□□□ 0.22
CDH4-203ENST00000614565 AMPHP49418 695 aa16.41■□□□□ 0.22
CDH4-203ENST00000614565 UNC13AQ9UPW8 1703 aa16.41■□□□□ 0.22
CDH4-203ENST00000614565 ANP32BQ92688 251 aaKnown RBP16.4■□□□□ 0.22
CDH4-203ENST00000614565 SPAG9O60271 1321 aaKnown RBP16.39■□□□□ 0.21
CDH4-203ENST00000614565 PSME1Q06323 249 aa16.38■□□□□ 0.21
CDH4-203ENST00000614565 NGEFQ8N5V2 710 aa16.38■□□□□ 0.21
CDH4-203ENST00000614565 CARMIL1Q5VZK9 1371 aa16.38■□□□□ 0.21
CDH4-203ENST00000614565 SYNJ1O43426 1573 aa16.38■□□□□ 0.21
CDH4-203ENST00000614565 KCNJ4P48050 445 aa16.37■□□□□ 0.21
CDH4-203ENST00000614565 NBR1Q14596 966 aa16.36■□□□□ 0.21
CDH4-203ENST00000614565 RAD21O60216 631 aa16.36■□□□□ 0.21
CDH4-203ENST00000614565 FRAT1Q92837 279 aaPredicted RBP16.36■□□□□ 0.21
CDH4-203ENST00000614565 MORC1Q86VD1 984 aa16.35■□□□□ 0.21
CDH4-203ENST00000614565 PRM3Q9NNZ6 103 aa16.35■□□□□ 0.21
CDH4-203ENST00000614565 ANO8Q9HCE9 1232 aaPredicted RBP16.34■□□□□ 0.21
CDH4-203ENST00000614565 APBB1O00213 710 aa16.34■□□□□ 0.21
CDH4-203ENST00000614565 FKBP8Q14318 412 aa16.34■□□□□ 0.21
CDH4-203ENST00000614565 SAMD1Q6SPF0 538 aaPredicted RBP16.34■□□□□ 0.21
CDH4-203ENST00000614565 MIER1Q8N108 512 aa16.33■□□□□ 0.2
CDH4-203ENST00000614565 CFAP44Q96MT7 982 aa16.33■□□□□ 0.2
CDH4-203ENST00000614565 IRX6P78412 446 aaPredicted RBP16.33■□□□□ 0.2
CDH4-203ENST00000614565 NUTM2GQ5VZR2 741 aa16.32■□□□□ 0.2
CDH4-203ENST00000614565 GORABQ5T7V8 394 aa16.32■□□□□ 0.2
CDH4-203ENST00000614565 STRN4Q9NRL3 753 aa16.31■□□□□ 0.2
CDH4-203ENST00000614565 KANK4Q5T7N3 995 aaPredicted RBP16.3■□□□□ 0.2
CDH4-203ENST00000614565 PEG3Q9GZU2 1588 aa16.29■□□□□ 0.2
CDH4-203ENST00000614565 VPS53Q5VIR6 699 aa16.29■□□□□ 0.2
CDH4-203ENST00000614565 PAXIP1Q6ZW49 1069 aaPredicted RBP16.28■□□□□ 0.2
CDH4-203ENST00000614565 EIF5BO60841 1220 aaKnown RBP16.27■□□□□ 0.19
CDH4-203ENST00000614565 PROSER2Q86WR7 435 aaPredicted RBP16.26■□□□□ 0.19
CDH4-203ENST00000614565 TRAK1Q9UPV9 953 aa16.26■□□□□ 0.19
CDH4-203ENST00000614565 TMF1P82094 1093 aa16.24■□□□□ 0.19
CDH4-203ENST00000614565 PKD2Q13563 968 aa16.24■□□□□ 0.19
CDH4-203ENST00000614565 KIF21BO75037 1637 aa16.23■□□□□ 0.19
CDH4-203ENST00000614565 ZRSR1Q15695 479 aaKnown RBP16.22■□□□□ 0.19
CDH4-203ENST00000614565 CASC1Q6TDU7 716 aa16.22■□□□□ 0.19
CDH4-203ENST00000614565 PNNQ9H307 717 aaKnown RBP16.22■□□□□ 0.19
CDH4-203ENST00000614565 TRIM34Q9BYJ4 488 aa16.22■□□□□ 0.19
CDH4-203ENST00000614565 CTDP1Q9Y5B0 961 aaPredicted RBP16.22■□□□□ 0.19
CDH4-203ENST00000614565 CCDC136Q96JN2 1154 aa16.21■□□□□ 0.19
CDH4-203ENST00000614565 FAM177BA6PVY3 158 aa16.2■□□□□ 0.18
CDH4-203ENST00000614565 C1orf141Q5JVX7 400 aa16.2■□□□□ 0.18
CDH4-203ENST00000614565 CNKSR2Q8WXI2 1034 aa16.2■□□□□ 0.18
CDH4-203ENST00000614565 PTPRGP23470 1445 aa16.19■□□□□ 0.18
CDH4-203ENST00000614565 SIN3AQ96ST3 1273 aa16.18■□□□□ 0.18
CDH4-203ENST00000614565 NCAPD3P42695 1498 aa16.17■□□□□ 0.18
CDH4-203ENST00000614565 MINK1Q8N4C8 1332 aaPredicted RBP16.17■□□□□ 0.18
CDH4-203ENST00000614565 ESCO1Q5FWF5 840 aa16.17■□□□□ 0.18
CDH4-203ENST00000614565 TOMM22Q9NS69 142 aa16.15■□□□□ 0.18
CDH4-203ENST00000614565 ADAMTS2O95450 1211 aa16.15■□□□□ 0.18
CDH4-203ENST00000614565 U2AF1L5P0DN76 240 aaPredicted RBP16.15■□□□□ 0.18
CDH4-203ENST00000614565 U2AF1Q01081 240 aaKnown RBP eCLIP16.15■□□□□ 0.18
CDH4-203ENST00000614565 PDE4CQ08493 712 aa16.15■□□□□ 0.18
CDH4-203ENST00000614565 NUP155O75694 1391 aa16.14■□□□□ 0.17
CDH4-203ENST00000614565 NCLP19338 710 aaKnown RBP16.14■□□□□ 0.17
CDH4-203ENST00000614565 PRXQ9BXM0 1461 aa16.13■□□□□ 0.17
CDH4-203ENST00000614565 SLC4A10Q6U841 1118 aa16.13■□□□□ 0.17
CDH4-203ENST00000614565 TOP2BQ02880 1626 aa16.12■□□□□ 0.17
CDH4-203ENST00000614565 TTC5Q8N0Z6 440 aa16.12■□□□□ 0.17
CDH4-203ENST00000614565 GNL2Q13823 731 aaKnown RBP16.12■□□□□ 0.17
CDH4-203ENST00000614565 NLRP2Q9NX02 1062 aa16.12■□□□□ 0.17
CDH4-203ENST00000614565 WWC1Q8IX03 1113 aa16.11■□□□□ 0.17
CDH4-203ENST00000614565 GRM1Q13255 1194 aa16.11■□□□□ 0.17
CDH4-203ENST00000614565 CCAR1Q8IX12 1150 aaKnown RBP16.11■□□□□ 0.17
CDH4-203ENST00000614565 NECTIN2Q92692 538 aa16.1■□□□□ 0.17
CDH4-203ENST00000614565 ARAP1Q96P48 1450 aa16.09■□□□□ 0.17
CDH4-203ENST00000614565 DHX57Q6P158 1386 aaKnown RBP16.08■□□□□ 0.17
CDH4-203ENST00000614565 TXNDC2Q86VQ3 553 aa16.08■□□□□ 0.17
CDH4-203ENST00000614565 RBM33Q96EV2 1170 aaKnown RBP16.08■□□□□ 0.17
CDH4-203ENST00000614565 XPCQ01831 940 aaPredicted RBP16.08■□□□□ 0.16
CDH4-203ENST00000614565 TERF2IPQ9NYB0 399 aa16.08■□□□□ 0.16
CDH4-203ENST00000614565 PDE3BQ13370 1112 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms