RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 MPHOSPH9Q99550 1183 aa4.96□□□□□ -1.62
LIG4-205ENST00000614526 SLC4A1APQ9BWU0 796 aaKnown RBP4.96□□□□□ -1.62
LIG4-205ENST00000614526 MIA2Q96PC5 1412 aa4.96□□□□□ -1.62
LIG4-205ENST00000614526 YTHDC1Q96MU7 727 aaKnown RBP4.96□□□□□ -1.62
LIG4-205ENST00000614526 ABCA8O94911 1581 aa4.96□□□□□ -1.62
LIG4-205ENST00000614526 DAPK1P53355 1430 aa4.95□□□□□ -1.62
LIG4-205ENST00000614526 MIER1Q8N108 512 aa4.95□□□□□ -1.62
LIG4-205ENST00000614526 MYT1LQ9UL68 1186 aa4.95□□□□□ -1.62
LIG4-205ENST00000614526 GRWD1Q9BQ67 446 aaKnown RBP eCLIP4.95□□□□□ -1.62
LIG4-205ENST00000614526 KDM6BO15054 1643 aa4.95□□□□□ -1.62
LIG4-205ENST00000614526 CAMSAP2Q08AD1 1489 aa4.95□□□□□ -1.62
LIG4-205ENST00000614526 TCOF1Q13428 1488 aaKnown RBP4.95□□□□□ -1.62
LIG4-205ENST00000614526 TONSLQ96HA7 1378 aa4.94□□□□□ -1.62
LIG4-205ENST00000614526 PPP1R15AO75807 674 aaPredicted RBP4.94□□□□□ -1.62
LIG4-205ENST00000614526 ZNF326Q5BKZ1 582 aaKnown RBP4.93□□□□□ -1.62
LIG4-205ENST00000614526 CYB5RLQ6IPT4 315 aa4.93□□□□□ -1.62
LIG4-205ENST00000614526 NPM1P06748 294 aaKnown RBP eCLIP4.93□□□□□ -1.62
LIG4-205ENST00000614526 PKD2Q13563 968 aa4.92□□□□□ -1.62
LIG4-205ENST00000614526 AFAP1Q8N556 730 aa4.92□□□□□ -1.62
LIG4-205ENST00000614526 ABCC10Q5T3U5 1492 aa4.92□□□□□ -1.62
LIG4-205ENST00000614526 NCOA1Q15788 1441 aa4.92□□□□□ -1.62
LIG4-205ENST00000614526 DDX10Q13206 875 aaKnown RBP4.92□□□□□ -1.62
LIG4-205ENST00000614526 CLASP1Q7Z460 1538 aa4.92□□□□□ -1.62
LIG4-205ENST00000614526 AKNAQ7Z591 1439 aa4.92□□□□□ -1.62
LIG4-205ENST00000614526 L3MBTL2Q969R5 705 aa4.92□□□□□ -1.62
LIG4-205ENST00000614526 ANKRD30AQ9BXX3 1397 aa4.92□□□□□ -1.62
LIG4-205ENST00000614526 ABCC2Q92887 1545 aa4.91□□□□□ -1.62
LIG4-205ENST00000614526 SHROOM2Q13796 1616 aa4.91□□□□□ -1.62
LIG4-205ENST00000614526 ARHGAP5Q13017 1502 aa4.91□□□□□ -1.62
LIG4-205ENST00000614526 EFCAB2Q5VUJ9 269 aa4.91□□□□□ -1.62
LIG4-205ENST00000614526 NUP155O75694 1391 aa4.91□□□□□ -1.62
LIG4-205ENST00000614526 C9orf84Q5VXU9 1444 aa4.91□□□□□ -1.62
LIG4-205ENST00000614526 KIF15Q9NS87 1388 aa4.9□□□□□ -1.62
LIG4-205ENST00000614526 ANKRD50Q9ULJ7 1429 aa4.9□□□□□ -1.62
LIG4-205ENST00000614526 DENND4BO75064 1496 aaPredicted RBP4.9□□□□□ -1.62
LIG4-205ENST00000614526 ROCK1Q13464 1354 aa4.9□□□□□ -1.63
LIG4-205ENST00000614526 KDM2AQ9Y2K7 1162 aa4.9□□□□□ -1.63
LIG4-205ENST00000614526 DNMT1P26358 1616 aaKnown RBP4.9□□□□□ -1.63
LIG4-205ENST00000614526 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.89□□□□□ -1.63
LIG4-205ENST00000614526 CDC42BPAQ5VT25 1732 aa4.89□□□□□ -1.63
LIG4-205ENST00000614526 TTC37Q6PGP7 1564 aa4.89□□□□□ -1.63
LIG4-205ENST00000614526 CNGB1Q14028 1251 aaPredicted RBP4.89□□□□□ -1.63
LIG4-205ENST00000614526 RGL3Q3MIN7 710 aa4.89□□□□□ -1.63
LIG4-205ENST00000614526 MBD5Q9P267 1494 aa4.88□□□□□ -1.63
LIG4-205ENST00000614526 SYCP2Q9BX26 1530 aa4.88□□□□□ -1.63
LIG4-205ENST00000614526 ITSN2Q9NZM3 1697 aa4.88□□□□□ -1.63
LIG4-205ENST00000614526 NBPF8Q3BBV2 869 aa4.88□□□□□ -1.63
LIG4-205ENST00000614526 POLR3GLQ9BT43 218 aa4.88□□□□□ -1.63
LIG4-205ENST00000614526 TIMELESSQ9UNS1 1208 aa4.88□□□□□ -1.63
LIG4-205ENST00000614526 ZCCHC11Q5TAX3 1644 aaKnown RBP4.88□□□□□ -1.63
LIG4-205ENST00000614526 KDM5BQ9UGL1 1544 aa4.88□□□□□ -1.63
LIG4-205ENST00000614526 ADCY10Q96PN6 1610 aa4.88□□□□□ -1.63
LIG4-205ENST00000614526 ANKRD30BQ9BXX2 1392 aa4.88□□□□□ -1.63
LIG4-205ENST00000614526 ASXL2Q76L83 1435 aa4.88□□□□□ -1.63
LIG4-205ENST00000614526 TRAPPC8Q9Y2L5 1435 aa4.88□□□□□ -1.63
LIG4-205ENST00000614526 SAMD9LQ8IVG5 1584 aa4.87□□□□□ -1.63
LIG4-205ENST00000614526 SPAG9O60271 1321 aaKnown RBP4.87□□□□□ -1.63
LIG4-205ENST00000614526 ARHGEF12Q9NZN5 1544 aa4.87□□□□□ -1.63
LIG4-205ENST00000614526 RSPH4AQ5TD94 716 aa4.87□□□□□ -1.63
LIG4-205ENST00000614526 PLCH2O75038 1416 aa4.87□□□□□ -1.63
LIG4-205ENST00000614526 CCDC141Q6ZP82 1450 aa4.87□□□□□ -1.63
LIG4-205ENST00000614526 HSPA5P11021 654 aaKnown RBP4.87□□□□□ -1.63
LIG4-205ENST00000614526 CDC42BPBQ9Y5S2 1711 aa4.87□□□□□ -1.63
LIG4-205ENST00000614526 GCC2Q8IWJ2 1684 aa4.86□□□□□ -1.63
LIG4-205ENST00000614526 PZPP20742 1482 aa4.86□□□□□ -1.63
LIG4-205ENST00000614526 PLEKHH2Q8IVE3 1493 aa4.86□□□□□ -1.63
LIG4-205ENST00000614526 DCAF11Q8TEB1 546 aa4.86□□□□□ -1.63
LIG4-205ENST00000614526 UHRF1BP1LA0JNW5 1464 aa4.86□□□□□ -1.63
LIG4-205ENST00000614526 WDR7Q9Y4E6 1490 aa4.86□□□□□ -1.63
LIG4-205ENST00000614526 KIF3BO15066 747 aa4.86□□□□□ -1.63
LIG4-205ENST00000614526 RAPGEF3O95398 923 aa4.86□□□□□ -1.63
LIG4-205ENST00000614526 SCAPERQ9BY12 1400 aa4.85□□□□□ -1.63
LIG4-205ENST00000614526 ADGRL2O95490 1459 aa4.85□□□□□ -1.63
LIG4-205ENST00000614526 EIF4G2P78344 907 aaKnown RBP eCLIP4.85□□□□□ -1.63
LIG4-205ENST00000614526 SENP3Q9H4L4 574 aaPredicted RBP4.85□□□□□ -1.63
LIG4-205ENST00000614526 KIAA1107Q9UPP5 1409 aa4.85□□□□□ -1.63
LIG4-205ENST00000614526 PREX2Q70Z35 1606 aa4.85□□□□□ -1.63
LIG4-205ENST00000614526 FANCAO15360 1455 aa4.84□□□□□ -1.63
LIG4-205ENST00000614526 PHF23Q9BUL5 403 aaPredicted RBP4.84□□□□□ -1.63
LIG4-205ENST00000614526 C11orf95C9JLR9 678 aaPredicted RBP4.84□□□□□ -1.63
LIG4-205ENST00000614526 GGT6Q6P531 493 aa4.84□□□□□ -1.63
LIG4-205ENST00000614526 FAM69CQ0P6D2 419 aa4.83□□□□□ -1.64
LIG4-205ENST00000614526 CD109Q6YHK3 1445 aa4.83□□□□□ -1.64
LIG4-205ENST00000614526 MYO5CQ9NQX4 1742 aa4.83□□□□□ -1.64
LIG4-205ENST00000614526 RPRD2Q5VT52 1461 aaKnown RBP4.83□□□□□ -1.64
LIG4-205ENST00000614526 SHANK2Q9UPX8 1470 aa4.83□□□□□ -1.64
LIG4-205ENST00000614526 CENPBP07199 599 aaPredicted RBP4.83□□□□□ -1.64
LIG4-205ENST00000614526 ADGRL1O94910 1474 aa4.83□□□□□ -1.64
LIG4-205ENST00000614526 ACIN1Q9UKV3 1341 aaKnown RBP4.83□□□□□ -1.64
LIG4-205ENST00000614526 CROCC2H7BZ55 1655 aa4.82□□□□□ -1.64
LIG4-205ENST00000614526 ADGBQ8N7X0 1667 aa4.82□□□□□ -1.64
LIG4-205ENST00000614526 ARHGEF5Q12774 1597 aa4.82□□□□□ -1.64
LIG4-205ENST00000614526 CHGAP10645 457 aaKnown RBP4.82□□□□□ -1.64
LIG4-205ENST00000614526 WASHC2AQ641Q2 1341 aa4.82□□□□□ -1.64
LIG4-205ENST00000614526 CARD11Q9BXL7 1154 aa4.82□□□□□ -1.64
LIG4-205ENST00000614526 SCAF1Q9H7N4 1312 aaKnown RBP4.82□□□□□ -1.64
LIG4-205ENST00000614526 ANP32CO43423 234 aa4.81□□□□□ -1.64
LIG4-205ENST00000614526 NBPF1Q3BBV0 1214 aa4.81□□□□□ -1.64
LIG4-205ENST00000614526 FAM135AQ9P2D6 1515 aa4.81□□□□□ -1.64
LIG4-205ENST00000614526 ABCC1P33527 1531 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms