RNA–Protein interactions for RNA: ENST00000614078.4

PCSK4-213, Transcript of proprotein convertase subtilisin/kexin type 4, humanhuman

TSL 4

Gene PCSK4, Length 730 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK4-213ENST00000614078 APLP2Q06481 763 aa28.95■■■□□ 2.22
PCSK4-213ENST00000614078 RIMS1Q86UR5 1692 aaKnown RBP28.95■■■□□ 2.22
PCSK4-213ENST00000614078 SIGLEC1Q9BZZ2 1709 aa28.94■■■□□ 2.22
PCSK4-213ENST00000614078 PLCH2O75038 1416 aa28.94■■■□□ 2.22
PCSK4-213ENST00000614078 TTC37Q6PGP7 1564 aa28.93■■■□□ 2.22
PCSK4-213ENST00000614078 MAP3K1Q13233 1512 aa28.93■■■□□ 2.22
PCSK4-213ENST00000614078 ARHGEF40Q8TER5 1519 aa28.91■■■□□ 2.22
PCSK4-213ENST00000614078 AKNAQ7Z591 1439 aa28.91■■■□□ 2.22
PCSK4-213ENST00000614078 DENND4BO75064 1496 aaPredicted RBP28.91■■■□□ 2.22
PCSK4-213ENST00000614078 FANCAO15360 1455 aa28.9■■■□□ 2.22
PCSK4-213ENST00000614078 EFCAB2Q5VUJ9 269 aa28.89■■■□□ 2.22
PCSK4-213ENST00000614078 LMTK3Q96Q04 1460 aa28.88■■■□□ 2.21
PCSK4-213ENST00000614078 YEATS2Q9ULM3 1422 aa28.86■■■□□ 2.21
PCSK4-213ENST00000614078 FBXO41Q8TF61 875 aa28.86■■■□□ 2.21
PCSK4-213ENST00000614078 TIAM1Q13009 1591 aa28.86■■■□□ 2.21
PCSK4-213ENST00000614078 HSPA2P54652 639 aa28.85■■■□□ 2.21
PCSK4-213ENST00000614078 EHBP1L1Q8N3D4 1523 aa28.84■■■□□ 2.21
PCSK4-213ENST00000614078 CFAP74Q9C0B2 1584 aa28.83■■■□□ 2.21
PCSK4-213ENST00000614078 MLECQ14165 292 aa28.8■■■□□ 2.2
PCSK4-213ENST00000614078 MYO5CQ9NQX4 1742 aa28.8■■■□□ 2.2
PCSK4-213ENST00000614078 LRRC9Q6ZRR7 1453 aa28.79■■■□□ 2.2
PCSK4-213ENST00000614078 CCNB3Q8WWL7 1395 aa28.78■■■□□ 2.2
PCSK4-213ENST00000614078 ZFYVE16Q7Z3T8 1539 aa28.76■■■□□ 2.19
PCSK4-213ENST00000614078 ARHGAP5Q13017 1502 aa28.75■■■□□ 2.19
PCSK4-213ENST00000614078 ZMYM4Q5VZL5 1548 aa28.75■■■□□ 2.19
PCSK4-213ENST00000614078 GPATCH8Q9UKJ3 1502 aaKnown RBP28.74■■■□□ 2.19
PCSK4-213ENST00000614078 KANK4Q5T7N3 995 aaPredicted RBP28.73■■■□□ 2.19
PCSK4-213ENST00000614078 CFDP1Q9UEE9 299 aaPredicted RBP28.72■■■□□ 2.19
PCSK4-213ENST00000614078 SCAPERQ9BY12 1400 aa28.71■■■□□ 2.19
PCSK4-213ENST00000614078 SUPT6HQ7KZ85 1726 aaKnown RBP28.7■■■□□ 2.19
PCSK4-213ENST00000614078 PREX2Q70Z35 1606 aa28.69■■■□□ 2.18
PCSK4-213ENST00000614078 NCOA2Q15596 1464 aa28.68■■■□□ 2.18
PCSK4-213ENST00000614078 FER1L4A9Z1Z3 1794 aa28.67■■■□□ 2.18
PCSK4-213ENST00000614078 CDC42BPBQ9Y5S2 1711 aa28.66■■■□□ 2.18
PCSK4-213ENST00000614078 POGZQ7Z3K3 1410 aa28.66■■■□□ 2.18
PCSK4-213ENST00000614078 CDC42BPAQ5VT25 1732 aa28.66■■■□□ 2.18
PCSK4-213ENST00000614078 ZNF777Q9ULD5 760 aaPredicted RBP28.63■■■□□ 2.17
PCSK4-213ENST00000614078 CEBPAP49715 358 aaPredicted RBP28.61■■■□□ 2.17
PCSK4-213ENST00000614078 PLEKHH2Q8IVE3 1493 aa28.6■■■□□ 2.17
PCSK4-213ENST00000614078 MAGI2Q86UL8 1455 aa28.59■■■□□ 2.17
PCSK4-213ENST00000614078 ITSN2Q9NZM3 1697 aa28.58■■■□□ 2.17
PCSK4-213ENST00000614078 KIAA1107Q9UPP5 1409 aa28.58■■■□□ 2.17
PCSK4-213ENST00000614078 ZNF518AQ6AHZ1 1483 aa28.56■■■□□ 2.16
PCSK4-213ENST00000614078 ATP10AO60312 1499 aa28.55■■■□□ 2.16
PCSK4-213ENST00000614078 AFAP1Q8N556 730 aa28.54■■■□□ 2.16
PCSK4-213ENST00000614078 ARHGEF12Q9NZN5 1544 aa28.53■■■□□ 2.16
PCSK4-213ENST00000614078 ABCC1P33527 1531 aa28.53■■■□□ 2.16
PCSK4-213ENST00000614078 RSPH4AQ5TD94 716 aa28.52■■■□□ 2.16
PCSK4-213ENST00000614078 C9orf84Q5VXU9 1444 aa28.52■■■□□ 2.16
PCSK4-213ENST00000614078 MIA2Q96PC5 1412 aa28.52■■■□□ 2.16
PCSK4-213ENST00000614078 HNRNPMP52272 730 aaKnown RBP eCLIP28.5■■■□□ 2.15
PCSK4-213ENST00000614078 MYOM3Q5VTT5 1437 aa28.5■■■□□ 2.15
PCSK4-213ENST00000614078 SAMD9LQ8IVG5 1584 aa28.5■■■□□ 2.15
PCSK4-213ENST00000614078 CERKQ8TCT0 537 aa28.47■■■□□ 2.15
PCSK4-213ENST00000614078 ZNF644Q9H582 1327 aaPredicted RBP28.46■■■□□ 2.15
PCSK4-213ENST00000614078 TRAPPC8Q9Y2L5 1435 aa28.45■■■□□ 2.15
PCSK4-213ENST00000614078 MYT1LQ9UL68 1186 aa28.45■■■□□ 2.14
PCSK4-213ENST00000614078 PREX1Q8TCU6 1659 aa28.45■■■□□ 2.14
PCSK4-213ENST00000614078 KDM5CP41229 1560 aa28.43■■■□□ 2.14
PCSK4-213ENST00000614078 MLH3Q9UHC1 1453 aa28.43■■■□□ 2.14
PCSK4-213ENST00000614078 DIP2CQ9Y2E4 1556 aa28.42■■■□□ 2.14
PCSK4-213ENST00000614078 SYCP2Q9BX26 1530 aa28.42■■■□□ 2.14
PCSK4-213ENST00000614078 STRCQ7RTU9 1775 aa28.42■■■□□ 2.14
PCSK4-213ENST00000614078 ABCA6Q8N139 1617 aa28.4■■■□□ 2.14
PCSK4-213ENST00000614078 SPAG9O60271 1321 aaKnown RBP28.4■■■□□ 2.14
PCSK4-213ENST00000614078 CAMSAP2Q08AD1 1489 aa28.4■■■□□ 2.14
PCSK4-213ENST00000614078 MBD5Q9P267 1494 aa28.4■■■□□ 2.14
PCSK4-213ENST00000614078 TSPY4P0CV99 314 aa28.35■■■□□ 2.13
PCSK4-213ENST00000614078 TSPY10P0CW01 314 aa28.35■■■□□ 2.13
PCSK4-213ENST00000614078 FGD6Q6ZV73 1430 aa28.34■■■□□ 2.13
PCSK4-213ENST00000614078 C3P01024 1663 aa28.33■■■□□ 2.13
PCSK4-213ENST00000614078 RTEL1-TNFRSF6BF6WH68 1400 aa28.31■■■□□ 2.12
PCSK4-213ENST00000614078 CCDC141Q6ZP82 1450 aa28.31■■■□□ 2.12
PCSK4-213ENST00000614078 ARHGEF5Q12774 1597 aa28.3■■■□□ 2.12
PCSK4-213ENST00000614078 SETD1BQ9UPS6 1966 aaKnown RBP28.3■■■□□ 2.12
PCSK4-213ENST00000614078 UHRF1BP1Q6BDS2 1440 aa28.27■■■□□ 2.12
PCSK4-213ENST00000614078 KIDINS220Q9ULH0 1771 aa28.27■■■□□ 2.12
PCSK4-213ENST00000614078 PPARGC1BQ86YN6 1023 aaKnown RBP28.27■■■□□ 2.12
PCSK4-213ENST00000614078 TCOF1Q13428 1488 aaKnown RBP28.27■■■□□ 2.12
PCSK4-213ENST00000614078 PTPN23Q9H3S7 1636 aa28.26■■■□□ 2.11
PCSK4-213ENST00000614078 REREQ9P2R6 1566 aa28.24■■■□□ 2.11
PCSK4-213ENST00000614078 ATP7AQ04656 1500 aa28.23■■■□□ 2.11
PCSK4-213ENST00000614078 FAM50AQ14320 339 aaKnown RBP28.2■■■□□ 2.1
PCSK4-213ENST00000614078 INO80Q9ULG1 1556 aaPredicted RBP28.2■■■□□ 2.1
PCSK4-213ENST00000614078 AGLP35573 1532 aa28.18■■■□□ 2.1
PCSK4-213ENST00000614078 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.15■■■□□ 2.1
PCSK4-213ENST00000614078 ESF1Q9H501 851 aaKnown RBP28.15■■■□□ 2.1
PCSK4-213ENST00000614078 ABCC5O15440 1437 aa28.15■■■□□ 2.1
PCSK4-213ENST00000614078 ILDR2Q71H61 639 aa28.14■■■□□ 2.1
PCSK4-213ENST00000614078 DMRT2Q9Y5R5 561 aa28.14■■■□□ 2.1
PCSK4-213ENST00000614078 A2MP01023 1474 aa28.14■■■□□ 2.09
PCSK4-213ENST00000614078 MAST1Q9Y2H9 1570 aa28.13■■■□□ 2.09
PCSK4-213ENST00000614078 DAPK1P53355 1430 aa28.12■■■□□ 2.09
PCSK4-213ENST00000614078 SHANK2Q9UPX8 1470 aa28.12■■■□□ 2.09
PCSK4-213ENST00000614078 DHX29Q7Z478 1369 aaKnown RBP28.11■■■□□ 2.09
PCSK4-213ENST00000614078 DNMT1P26358 1616 aaKnown RBP28.1■■■□□ 2.09
PCSK4-213ENST00000614078 ADGBQ8N7X0 1667 aa28.09■■■□□ 2.09
PCSK4-213ENST00000614078 DISP3Q9P2K9 1392 aa28.09■■■□□ 2.09
PCSK4-213ENST00000614078 LTBP4Q8N2S1 1624 aa28.08■■■□□ 2.09
PCSK4-213ENST00000614078 PTPRTO14522 1441 aa28.08■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 359.8 ms