RNA–Protein interactions for RNA: ENST00000612485.1

PRKN-209, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 225 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-209ENST00000612485 POGZQ7Z3K3 1410 aa28.08■■■□□ 2.09
PRKN-209ENST00000612485 MAGI2Q86UL8 1455 aa28.08■■■□□ 2.09
PRKN-209ENST00000612485 ADAMTSL3P82987 1691 aa28.06■■■□□ 2.08
PRKN-209ENST00000612485 ARHGAP5Q13017 1502 aa28.05■■■□□ 2.08
PRKN-209ENST00000612485 ZFYVE16Q7Z3T8 1539 aa28.05■■■□□ 2.08
PRKN-209ENST00000612485 BCORL1Q5H9F3 1711 aa28.04■■■□□ 2.08
PRKN-209ENST00000612485 YEATS2Q9ULM3 1422 aa28.01■■■□□ 2.07
PRKN-209ENST00000612485 HECW2Q9P2P5 1572 aa27.99■■■□□ 2.07
PRKN-209ENST00000612485 PTPRMP28827 1452 aa27.99■■■□□ 2.07
PRKN-209ENST00000612485 ZNF518AQ6AHZ1 1483 aa27.96■■■□□ 2.07
PRKN-209ENST00000612485 MADDQ8WXG6 1647 aa27.95■■■□□ 2.06
PRKN-209ENST00000612485 CDC42BPBQ9Y5S2 1711 aa27.95■■■□□ 2.06
PRKN-209ENST00000612485 PREX2Q70Z35 1606 aa27.94■■■□□ 2.06
PRKN-209ENST00000612485 ATP10AO60312 1499 aa27.91■■■□□ 2.06
PRKN-209ENST00000612485 AFAP1Q8N556 730 aa27.9■■■□□ 2.06
PRKN-209ENST00000612485 CEP162Q5TB80 1403 aa27.9■■■□□ 2.06
PRKN-209ENST00000612485 C9orf84Q5VXU9 1444 aa27.89■■■□□ 2.06
PRKN-209ENST00000612485 KDM5CP41229 1560 aa27.89■■■□□ 2.05
PRKN-209ENST00000612485 MYT1LQ9UL68 1186 aa27.86■■■□□ 2.05
PRKN-209ENST00000612485 CDC42BPAQ5VT25 1732 aa27.86■■■□□ 2.05
PRKN-209ENST00000612485 SIGLEC1Q9BZZ2 1709 aa27.86■■■□□ 2.05
PRKN-209ENST00000612485 ABCC1P33527 1531 aa27.86■■■□□ 2.05
PRKN-209ENST00000612485 RIMS1Q86UR5 1692 aaKnown RBP27.84■■■□□ 2.05
PRKN-209ENST00000612485 MLECQ14165 292 aa27.83■■■□□ 2.05
PRKN-209ENST00000612485 MTUS2Q5JR59 1369 aa27.83■■■□□ 2.05
PRKN-209ENST00000612485 TRAPPC8Q9Y2L5 1435 aa27.81■■■□□ 2.04
PRKN-209ENST00000612485 MLH3Q9UHC1 1453 aa27.81■■■□□ 2.04
PRKN-209ENST00000612485 ARHGEF12Q9NZN5 1544 aa27.81■■■□□ 2.04
PRKN-209ENST00000612485 GPATCH8Q9UKJ3 1502 aaKnown RBP27.81■■■□□ 2.04
PRKN-209ENST00000612485 ITSN2Q9NZM3 1697 aa27.81■■■□□ 2.04
PRKN-209ENST00000612485 ZNF777Q9ULD5 760 aaPredicted RBP27.79■■■□□ 2.04
PRKN-209ENST00000612485 CCNB3Q8WWL7 1395 aa27.77■■■□□ 2.04
PRKN-209ENST00000612485 DIP2CQ9Y2E4 1556 aa27.76■■■□□ 2.03
PRKN-209ENST00000612485 FER1L4A9Z1Z3 1794 aa27.75■■■□□ 2.03
PRKN-209ENST00000612485 CFDP1Q9UEE9 299 aaPredicted RBP27.74■■■□□ 2.03
PRKN-209ENST00000612485 SAMD9LQ8IVG5 1584 aa27.73■■■□□ 2.03
PRKN-209ENST00000612485 REREQ9P2R6 1566 aa27.73■■■□□ 2.03
PRKN-209ENST00000612485 EHBP1L1Q8N3D4 1523 aa27.73■■■□□ 2.03
PRKN-209ENST00000612485 ABCA6Q8N139 1617 aa27.72■■■□□ 2.03
PRKN-209ENST00000612485 PLPPR3Q6T4P5 718 aa27.72■■■□□ 2.03
PRKN-209ENST00000612485 PLEKHH2Q8IVE3 1493 aa27.71■■■□□ 2.03
PRKN-209ENST00000612485 LOC105371045A0A1W2PR82 267 aa27.71■■■□□ 2.03
PRKN-209ENST00000612485 SYCP2Q9BX26 1530 aa27.7■■■□□ 2.02
PRKN-209ENST00000612485 KIAA1107Q9UPP5 1409 aa27.69■■■□□ 2.02
PRKN-209ENST00000612485 HNRNPMP52272 730 aaKnown RBP eCLIP27.67■■■□□ 2.02
PRKN-209ENST00000612485 LMTK3Q96Q04 1460 aa27.67■■■□□ 2.02
PRKN-209ENST00000612485 KIDINS220Q9ULH0 1771 aa27.66■■■□□ 2.02
PRKN-209ENST00000612485 AGLP35573 1532 aa27.65■■■□□ 2.02
PRKN-209ENST00000612485 SPAG9O60271 1321 aaKnown RBP27.65■■■□□ 2.02
PRKN-209ENST00000612485 TIAM1Q13009 1591 aa27.64■■■□□ 2.01
PRKN-209ENST00000612485 VPS8Q8N3P4 1428 aa27.61■■■□□ 2.01
PRKN-209ENST00000612485 ESF1Q9H501 851 aaKnown RBP27.57■■■□□ 2
PRKN-209ENST00000612485 ATP7AQ04656 1500 aa27.57■■■□□ 2
PRKN-209ENST00000612485 SUPT6HQ7KZ85 1726 aaKnown RBP27.56■■■□□ 2
PRKN-209ENST00000612485 CEBPAP49715 358 aaPredicted RBP27.55■■■□□ 2
PRKN-209ENST00000612485 NCOA2Q15596 1464 aa27.55■■■□□ 2
PRKN-209ENST00000612485 ZNF644Q9H582 1327 aaPredicted RBP27.54■■■□□ 2
PRKN-209ENST00000612485 INO80Q9ULG1 1556 aaPredicted RBP27.53■■■□□ 2
PRKN-209ENST00000612485 HSPA2P54652 639 aa27.52■■■□□ 2
PRKN-209ENST00000612485 MBD5Q9P267 1494 aa27.51■■□□□ 1.99
PRKN-209ENST00000612485 ILDR1Q86SU0 546 aaPredicted RBP27.5■■□□□ 1.99
PRKN-209ENST00000612485 CNTLNQ9NXG0 1405 aa27.5■■□□□ 1.99
PRKN-209ENST00000612485 A2MP01023 1474 aa27.48■■□□□ 1.99
PRKN-209ENST00000612485 LRRC9Q6ZRR7 1453 aa27.48■■□□□ 1.99
PRKN-209ENST00000612485 PREX1Q8TCU6 1659 aa27.48■■□□□ 1.99
PRKN-209ENST00000612485 PLXNC1O60486 1568 aa27.45■■□□□ 1.99
PRKN-209ENST00000612485 MAP3K1Q13233 1512 aa27.45■■□□□ 1.98
PRKN-209ENST00000612485 RTEL1-TNFRSF6BF6WH68 1400 aa27.44■■□□□ 1.98
PRKN-209ENST00000612485 C3P01024 1663 aa27.44■■□□□ 1.98
PRKN-209ENST00000612485 CAMSAP2Q08AD1 1489 aa27.44■■□□□ 1.98
PRKN-209ENST00000612485 UHRF1BP1Q6BDS2 1440 aa27.43■■□□□ 1.98
PRKN-209ENST00000612485 RSPH4AQ5TD94 716 aa27.43■■□□□ 1.98
PRKN-209ENST00000612485 SETD1BQ9UPS6 1966 aaKnown RBP27.42■■□□□ 1.98
PRKN-209ENST00000612485 CCDC141Q6ZP82 1450 aa27.42■■□□□ 1.98
PRKN-209ENST00000612485 ADGBQ8N7X0 1667 aa27.42■■□□□ 1.98
PRKN-209ENST00000612485 KANK4Q5T7N3 995 aaPredicted RBP27.37■■□□□ 1.97
PRKN-209ENST00000612485 MROH2AA6NES4 1674 aa27.36■■□□□ 1.97
PRKN-209ENST00000612485 GGT6Q6P531 493 aa27.36■■□□□ 1.97
PRKN-209ENST00000612485 ZMYM3Q14202 1370 aa27.35■■□□□ 1.97
PRKN-209ENST00000612485 DHX29Q7Z478 1369 aaKnown RBP27.35■■□□□ 1.97
PRKN-209ENST00000612485 PPP6R1Q9UPN7 881 aa27.34■■□□□ 1.97
PRKN-209ENST00000612485 APLP2Q06481 763 aa27.33■■□□□ 1.97
PRKN-209ENST00000612485 ARHGEF5Q12774 1597 aa27.33■■□□□ 1.97
PRKN-209ENST00000612485 TSPY4P0CV99 314 aa27.32■■□□□ 1.96
PRKN-209ENST00000612485 TSPY10P0CW01 314 aa27.32■■□□□ 1.96
PRKN-209ENST00000612485 NPATQ14207 1427 aa27.32■■□□□ 1.96
PRKN-209ENST00000612485 CLTCQ00610 1675 aaKnown RBP27.3■■□□□ 1.96
PRKN-209ENST00000612485 MYOM3Q5VTT5 1437 aa27.28■■□□□ 1.96
PRKN-209ENST00000612485 MIA2Q96PC5 1412 aa27.28■■□□□ 1.96
PRKN-209ENST00000612485 DMRT2Q9Y5R5 561 aa27.27■■□□□ 1.96
PRKN-209ENST00000612485 FBXO41Q8TF61 875 aa27.26■■□□□ 1.95
PRKN-209ENST00000612485 KIF3BO15066 747 aa27.24■■□□□ 1.95
PRKN-209ENST00000612485 STRCQ7RTU9 1775 aa27.22■■□□□ 1.95
PRKN-209ENST00000612485 PTPRKQ15262 1439 aa27.2■■□□□ 1.94
PRKN-209ENST00000612485 MAST1Q9Y2H9 1570 aa27.19■■□□□ 1.94
PRKN-209ENST00000612485 FAM135AQ9P2D6 1515 aa27.18■■□□□ 1.94
PRKN-209ENST00000612485 KDM5DQ9BY66 1539 aa27.15■■□□□ 1.94
PRKN-209ENST00000612485 PTPRTO14522 1441 aa27.14■■□□□ 1.93
PRKN-209ENST00000612485 NCOA1Q15788 1441 aa27.14■■□□□ 1.93
PRKN-209ENST00000612485 WASHC2CQ9Y4E1 1318 aa27.13■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms