RNA–Protein interactions for RNA: ENST00000611736.5

VEGFA-226, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,239 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-226ENST00000611736 PREX2Q70Z35 1606 aa41.23■■■■■ 4.19
VEGFA-226ENST00000611736 EHBP1L1Q8N3D4 1523 aa41.23■■■■■ 4.19
VEGFA-226ENST00000611736 CDC42BPAQ5VT25 1732 aa41.21■■■■■ 4.19
VEGFA-226ENST00000611736 RICTORQ6R327 1708 aa41.21■■■■■ 4.19
VEGFA-226ENST00000611736 TIAM1Q13009 1591 aa41.2■■■■■ 4.19
VEGFA-226ENST00000611736 SCAPERQ9BY12 1400 aa41.18■■■■■ 4.18
VEGFA-226ENST00000611736 KDM4FA0A1W2PPD8 638 aa41.16■■■■■ 4.18
VEGFA-226ENST00000611736 GPATCH8Q9UKJ3 1502 aaKnown RBP41.12■■■■■ 4.17
VEGFA-226ENST00000611736 CCNB3Q8WWL7 1395 aa41.11■■■■■ 4.17
VEGFA-226ENST00000611736 POGZQ7Z3K3 1410 aa41.1■■■■■ 4.17
VEGFA-226ENST00000611736 ZMYM4Q5VZL5 1548 aa41.03■■■■■ 4.16
VEGFA-226ENST00000611736 ZNF777Q9ULD5 760 aaPredicted RBP41.03■■■■■ 4.16
VEGFA-226ENST00000611736 MAP3K1Q13233 1512 aa41.03■■■■■ 4.16
VEGFA-226ENST00000611736 LRRC9Q6ZRR7 1453 aa41.02■■■■■ 4.16
VEGFA-226ENST00000611736 SUPT6HQ7KZ85 1726 aaKnown RBP41.02■■■■■ 4.16
VEGFA-226ENST00000611736 ABCC1P33527 1531 aa41.01■■■■■ 4.16
VEGFA-226ENST00000611736 CFDP1Q9UEE9 299 aaPredicted RBP41■■■■■ 4.15
VEGFA-226ENST00000611736 ARHGEF40Q8TER5 1519 aa40.98■■■■■ 4.15
VEGFA-226ENST00000611736 NCOA2Q15596 1464 aa40.98■■■■■ 4.15
VEGFA-226ENST00000611736 ZNF518AQ6AHZ1 1483 aa40.96■■■■■ 4.15
VEGFA-226ENST00000611736 SAMD9LQ8IVG5 1584 aa40.96■■■■■ 4.15
VEGFA-226ENST00000611736 KANK4Q5T7N3 995 aaPredicted RBP40.96■■■■■ 4.15
VEGFA-226ENST00000611736 ARHGEF12Q9NZN5 1544 aa40.95■■■■■ 4.15
VEGFA-226ENST00000611736 APLP2Q06481 763 aa40.95■■■■■ 4.15
VEGFA-226ENST00000611736 AFAP1Q8N556 730 aa40.95■■■■■ 4.15
VEGFA-226ENST00000611736 ITSN2Q9NZM3 1697 aa40.94■■■■■ 4.15
VEGFA-226ENST00000611736 ZFYVE16Q7Z3T8 1539 aa40.94■■■■■ 4.14
VEGFA-226ENST00000611736 YEATS2Q9ULM3 1422 aa40.93■■■■■ 4.14
VEGFA-226ENST00000611736 MAGI2Q86UL8 1455 aa40.92■■■■■ 4.14
VEGFA-226ENST00000611736 TRAPPC8Q9Y2L5 1435 aa40.9■■■■■ 4.14
VEGFA-226ENST00000611736 KDM5CP41229 1560 aa40.89■■■■■ 4.14
VEGFA-226ENST00000611736 SYCP2Q9BX26 1530 aa40.88■■■■■ 4.13
VEGFA-226ENST00000611736 MYT1LQ9UL68 1186 aa40.84■■■■■ 4.13
VEGFA-226ENST00000611736 PLEKHH2Q8IVE3 1493 aa40.83■■■■■ 4.13
VEGFA-226ENST00000611736 HNRNPMP52272 730 aaKnown RBP eCLIP40.82■■■■■ 4.131e-12■■■■■ 34.3
VEGFA-226ENST00000611736 ARID4BQ4LE39 1312 aaPredicted RBP40.81■■■■■ 4.12
VEGFA-226ENST00000611736 ZNF644Q9H582 1327 aaPredicted RBP40.81■■■■■ 4.12
VEGFA-226ENST00000611736 HECW2Q9P2P5 1572 aa40.81■■■■■ 4.12
VEGFA-226ENST00000611736 KIAA1107Q9UPP5 1409 aa40.79■■■■■ 4.12
VEGFA-226ENST00000611736 MLH3Q9UHC1 1453 aa40.74■■■■■ 4.11
VEGFA-226ENST00000611736 ATP10AO60312 1499 aa40.73■■■■■ 4.11
VEGFA-226ENST00000611736 SIGLEC1Q9BZZ2 1709 aa40.7■■■■■ 4.11
VEGFA-226ENST00000611736 C9orf84Q5VXU9 1444 aa40.69■■■■■ 4.1
VEGFA-226ENST00000611736 CAMSAP2Q08AD1 1489 aa40.68■■■■■ 4.1
VEGFA-226ENST00000611736 DIP2CQ9Y2E4 1556 aa40.68■■■■■ 4.1
VEGFA-226ENST00000611736 ABCA6Q8N139 1617 aa40.67■■■■■ 4.1
VEGFA-226ENST00000611736 BCORL1Q5H9F3 1711 aa40.67■■■■■ 4.1
VEGFA-226ENST00000611736 KIDINS220Q9ULH0 1771 aa40.66■■■■■ 4.1
VEGFA-226ENST00000611736 SPAG9O60271 1321 aaKnown RBP40.66■■■■■ 4.1
VEGFA-226ENST00000611736 MBD5Q9P267 1494 aa40.64■■■■■ 4.1
VEGFA-226ENST00000611736 MYOM3Q5VTT5 1437 aa40.63■■■■■ 4.09
VEGFA-226ENST00000611736 ADAMTSL3P82987 1691 aa40.62■■■■■ 4.09
VEGFA-226ENST00000611736 ATP7AQ04656 1500 aa40.57■■■■■ 4.08
VEGFA-226ENST00000611736 MLECQ14165 292 aa40.56■■■■■ 4.08
VEGFA-226ENST00000611736 INO80Q9ULG1 1556 aaPredicted RBP40.55■■■■■ 4.08
VEGFA-226ENST00000611736 MIA2Q96PC5 1412 aa40.54■■■■■ 4.08
VEGFA-226ENST00000611736 MADDQ8WXG6 1647 aa40.53■■■■■ 4.08
VEGFA-226ENST00000611736 REREQ9P2R6 1566 aa40.52■■■■■ 4.08
VEGFA-226ENST00000611736 CCDC141Q6ZP82 1450 aa40.51■■■■■ 4.08
VEGFA-226ENST00000611736 ARHGEF5Q12774 1597 aa40.47■■■■■ 4.07
VEGFA-226ENST00000611736 RSPH4AQ5TD94 716 aa40.45■■■■■ 4.07
VEGFA-226ENST00000611736 RIMS1Q86UR5 1692 aaKnown RBP40.43■■■■■ 4.06
VEGFA-226ENST00000611736 PTPRMP28827 1452 aa40.42■■■■■ 4.06
VEGFA-226ENST00000611736 PTPN23Q9H3S7 1636 aa40.41■■■■■ 4.06
VEGFA-226ENST00000611736 AGLP35573 1532 aa40.4■■■■■ 4.06
VEGFA-226ENST00000611736 RTEL1-TNFRSF6BF6WH68 1400 aa40.4■■■■■ 4.06
VEGFA-226ENST00000611736 FGD6Q6ZV73 1430 aa40.4■■■■■ 4.06
VEGFA-226ENST00000611736 FER1L4A9Z1Z3 1794 aa40.38■■■■■ 4.05
VEGFA-226ENST00000611736 A2MP01023 1474 aa40.37■■■■■ 4.05
VEGFA-226ENST00000611736 TSPY4P0CV99 314 aa40.35■■■■■ 4.05
VEGFA-226ENST00000611736 TSPY10P0CW01 314 aa40.35■■■■■ 4.05
VEGFA-226ENST00000611736 ADGBQ8N7X0 1667 aa40.34■■■■■ 4.05
VEGFA-226ENST00000611736 PPARGC1BQ86YN6 1023 aaKnown RBP40.33■■■■■ 4.05
VEGFA-226ENST00000611736 PLXNC1O60486 1568 aa40.31■■■■■ 4.04
VEGFA-226ENST00000611736 TCOF1Q13428 1488 aaKnown RBP40.28■■■■■ 4.04
VEGFA-226ENST00000611736 PLPPR3Q6T4P5 718 aa40.28■■■■■ 4.04
VEGFA-226ENST00000611736 MAST1Q9Y2H9 1570 aa40.24■■■■■ 4.03
VEGFA-226ENST00000611736 DHX29Q7Z478 1369 aaKnown RBP40.21■■■■■ 4.03
VEGFA-226ENST00000611736 ABCC5O15440 1437 aa40.2■■■■■ 4.03
VEGFA-226ENST00000611736 CROCC2H7BZ55 1655 aa40.18■■■■■ 4.02
VEGFA-226ENST00000611736 FAM50AQ14320 339 aaKnown RBP40.17■■■■■ 4.02
VEGFA-226ENST00000611736 ESF1Q9H501 851 aaKnown RBP40.17■■■■■ 4.02
VEGFA-226ENST00000611736 DNMT1P26358 1616 aaKnown RBP40.16■■■■■ 4.02
VEGFA-226ENST00000611736 DAPK1P53355 1430 aa40.16■■■■■ 4.02
VEGFA-226ENST00000611736 SHANK2Q9UPX8 1470 aa40.13■■■■■ 4.01
VEGFA-226ENST00000611736 GGT6Q6P531 493 aa40.12■■■■■ 4.01
VEGFA-226ENST00000611736 CEBPAP49715 358 aaPredicted RBP40.09■■■■■ 4.01
VEGFA-226ENST00000611736 KIF3BO15066 747 aa40.08■■■■■ 4.01
VEGFA-226ENST00000611736 CNTLNQ9NXG0 1405 aa40.06■■■■■ 4
VEGFA-226ENST00000611736 CHIC2Q9UKJ5 165 aa40.03■■■■■ 4
VEGFA-226ENST00000611736 C3P01024 1663 aa40.01■■■■■ 4
VEGFA-226ENST00000611736 KIF15Q9NS87 1388 aa40■■■■□ 3.99
VEGFA-226ENST00000611736 CLTCQ00610 1675 aaKnown RBP39.99■■■■□ 3.99
VEGFA-226ENST00000611736 RRP7BPQ9NSQ0 103 aa39.99■■■■□ 3.99
VEGFA-226ENST00000611736 DUOX2Q9NRD8 1548 aa39.97■■■■□ 3.99
VEGFA-226ENST00000611736 MROH2AA6NES4 1674 aa39.96■■■■□ 3.99
VEGFA-226ENST00000611736 PPP6R1Q9UPN7 881 aa39.94■■■■□ 3.98
VEGFA-226ENST00000611736 ANKRD30AQ9BXX3 1397 aa39.94■■■■□ 3.98
VEGFA-226ENST00000611736 EIF2AK4Q9P2K8 1649 aaKnown RBP39.91■■■■□ 3.98
VEGFA-226ENST00000611736 ZMYM3Q14202 1370 aa39.91■■■■□ 3.98
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms