RNA–Protein interactions for RNA: ENST00000608461.1

HDDC2-206, Transcript of HD domain containing 2, humanhuman

TSL 2

Gene HDDC2, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-206ENST00000608461 ADGRL1O94910 1474 aa22.55■■□□□ 1.2
HDDC2-206ENST00000608461 RAPGEF3O95398 923 aa22.54■■□□□ 1.2
HDDC2-206ENST00000608461 CDC42BPAQ5VT25 1732 aa22.53■■□□□ 1.2
HDDC2-206ENST00000608461 RICTORQ6R327 1708 aa22.53■■□□□ 1.2
HDDC2-206ENST00000608461 SCAPERQ9BY12 1400 aa22.52■■□□□ 1.2
HDDC2-206ENST00000608461 GPATCH8Q9UKJ3 1502 aaKnown RBP22.52■■□□□ 1.19
HDDC2-206ENST00000608461 FRMPD1Q5SYB0 1578 aa22.51■■□□□ 1.19
HDDC2-206ENST00000608461 CCNB3Q8WWL7 1395 aa22.5■■□□□ 1.19
HDDC2-206ENST00000608461 POGZQ7Z3K3 1410 aa22.48■■□□□ 1.19
HDDC2-206ENST00000608461 SUPT6HQ7KZ85 1726 aaKnown RBP22.48■■□□□ 1.19
HDDC2-206ENST00000608461 LRRC9Q6ZRR7 1453 aa22.48■■□□□ 1.19
HDDC2-206ENST00000608461 MAGI2Q86UL8 1455 aa22.48■■□□□ 1.19
HDDC2-206ENST00000608461 ZMYM4Q5VZL5 1548 aa22.48■■□□□ 1.19
HDDC2-206ENST00000608461 APLP2Q06481 763 aa22.48■■□□□ 1.19
HDDC2-206ENST00000608461 ZNF518AQ6AHZ1 1483 aa22.46■■□□□ 1.19
HDDC2-206ENST00000608461 CFDP1Q9UEE9 299 aaPredicted RBP22.45■■□□□ 1.18
HDDC2-206ENST00000608461 ITSN2Q9NZM3 1697 aa22.45■■□□□ 1.18
HDDC2-206ENST00000608461 ABCC1P33527 1531 aa22.43■■□□□ 1.18
HDDC2-206ENST00000608461 PLEKHH2Q8IVE3 1493 aa22.43■■□□□ 1.18
HDDC2-206ENST00000608461 NCOA2Q15596 1464 aa22.42■■□□□ 1.18
HDDC2-206ENST00000608461 KIAA1107Q9UPP5 1409 aa22.41■■□□□ 1.18
HDDC2-206ENST00000608461 KDM5CP41229 1560 aa22.4■■□□□ 1.18
HDDC2-206ENST00000608461 ARHGEF40Q8TER5 1519 aa22.39■■□□□ 1.17
HDDC2-206ENST00000608461 SAMD9LQ8IVG5 1584 aa22.38■■□□□ 1.17
HDDC2-206ENST00000608461 ZFYVE16Q7Z3T8 1539 aa22.37■■□□□ 1.17
HDDC2-206ENST00000608461 KANK4Q5T7N3 995 aaPredicted RBP22.37■■□□□ 1.17
HDDC2-206ENST00000608461 ZNF777Q9ULD5 760 aaPredicted RBP22.37■■□□□ 1.17
HDDC2-206ENST00000608461 AFAP1Q8N556 730 aa22.36■■□□□ 1.17
HDDC2-206ENST00000608461 ARHGEF12Q9NZN5 1544 aa22.36■■□□□ 1.17
HDDC2-206ENST00000608461 MLH3Q9UHC1 1453 aa22.35■■□□□ 1.17
HDDC2-206ENST00000608461 KDM4FA0A1W2PPD8 638 aa22.34■■□□□ 1.17
HDDC2-206ENST00000608461 AEBP2Q6ZN18 517 aaPredicted RBP22.34■■□□□ 1.17
HDDC2-206ENST00000608461 HECW2Q9P2P5 1572 aa22.33■■□□□ 1.16
HDDC2-206ENST00000608461 TRAPPC8Q9Y2L5 1435 aa22.32■■□□□ 1.16
HDDC2-206ENST00000608461 SYCP2Q9BX26 1530 aa22.31■■□□□ 1.16
HDDC2-206ENST00000608461 RSPH4AQ5TD94 716 aa22.31■■□□□ 1.16
HDDC2-206ENST00000608461 YEATS2Q9ULM3 1422 aa22.31■■□□□ 1.16
HDDC2-206ENST00000608461 ATP10AO60312 1499 aa22.3■■□□□ 1.16
HDDC2-206ENST00000608461 MIA2Q96PC5 1412 aa22.3■■□□□ 1.16
HDDC2-206ENST00000608461 HNRNPMP52272 730 aaKnown RBP eCLIP22.29■■□□□ 1.16
HDDC2-206ENST00000608461 MYOM3Q5VTT5 1437 aa22.28■■□□□ 1.16
HDDC2-206ENST00000608461 C9orf84Q5VXU9 1444 aa22.27■■□□□ 1.16
HDDC2-206ENST00000608461 MYT1LQ9UL68 1186 aa22.26■■□□□ 1.15
HDDC2-206ENST00000608461 MBD5Q9P267 1494 aa22.26■■□□□ 1.15
HDDC2-206ENST00000608461 REREQ9P2R6 1566 aa22.25■■□□□ 1.15
HDDC2-206ENST00000608461 SPAG9O60271 1321 aaKnown RBP22.25■■□□□ 1.15
HDDC2-206ENST00000608461 ARID4BQ4LE39 1312 aaPredicted RBP22.25■■□□□ 1.15
HDDC2-206ENST00000608461 ZNF644Q9H582 1327 aaPredicted RBP22.25■■□□□ 1.15
HDDC2-206ENST00000608461 CAMSAP2Q08AD1 1489 aa22.24■■□□□ 1.15
HDDC2-206ENST00000608461 KIDINS220Q9ULH0 1771 aa22.23■■□□□ 1.15
HDDC2-206ENST00000608461 BCORL1Q5H9F3 1711 aa22.23■■□□□ 1.15
HDDC2-206ENST00000608461 DIP2CQ9Y2E4 1556 aa22.22■■□□□ 1.15
HDDC2-206ENST00000608461 RTEL1-TNFRSF6BF6WH68 1400 aa22.21■■□□□ 1.15
HDDC2-206ENST00000608461 ARHGEF5Q12774 1597 aa22.21■■□□□ 1.15
HDDC2-206ENST00000608461 ADAMTSL3P82987 1691 aa22.2■■□□□ 1.15
HDDC2-206ENST00000608461 ATP7AQ04656 1500 aa22.2■■□□□ 1.14
HDDC2-206ENST00000608461 ABCA6Q8N139 1617 aa22.2■■□□□ 1.14
HDDC2-206ENST00000608461 CCDC141Q6ZP82 1450 aa22.19■■□□□ 1.14
HDDC2-206ENST00000608461 INO80Q9ULG1 1556 aaPredicted RBP22.19■■□□□ 1.14
HDDC2-206ENST00000608461 AGLP35573 1532 aa22.16■■□□□ 1.14
HDDC2-206ENST00000608461 SIGLEC1Q9BZZ2 1709 aa22.15■■□□□ 1.14
HDDC2-206ENST00000608461 TSPY4P0CV99 314 aa22.15■■□□□ 1.14
HDDC2-206ENST00000608461 TSPY10P0CW01 314 aa22.15■■□□□ 1.14
HDDC2-206ENST00000608461 FGD6Q6ZV73 1430 aa22.13■■□□□ 1.13
HDDC2-206ENST00000608461 ADGBQ8N7X0 1667 aa22.11■■□□□ 1.13
HDDC2-206ENST00000608461 PTPN23Q9H3S7 1636 aa22.11■■□□□ 1.13
HDDC2-206ENST00000608461 TCOF1Q13428 1488 aaKnown RBP22.1■■□□□ 1.13
HDDC2-206ENST00000608461 MADDQ8WXG6 1647 aa22.09■■□□□ 1.13
HDDC2-206ENST00000608461 A2MP01023 1474 aa22.09■■□□□ 1.13
HDDC2-206ENST00000608461 MAST1Q9Y2H9 1570 aa22.08■■□□□ 1.13
HDDC2-206ENST00000608461 PTPRMP28827 1452 aa22.08■■□□□ 1.12
HDDC2-206ENST00000608461 PLXNC1O60486 1568 aa22.08■■□□□ 1.12
HDDC2-206ENST00000608461 MLECQ14165 292 aa22.05■■□□□ 1.12
HDDC2-206ENST00000608461 DHX29Q7Z478 1369 aaKnown RBP22.04■■□□□ 1.12
HDDC2-206ENST00000608461 FER1L4A9Z1Z3 1794 aa22.04■■□□□ 1.12
HDDC2-206ENST00000608461 SHANK2Q9UPX8 1470 aa22.03■■□□□ 1.12
HDDC2-206ENST00000608461 RIMS1Q86UR5 1692 aaKnown RBP22.02■■□□□ 1.12
HDDC2-206ENST00000608461 PPP6R1Q9UPN7 881 aa22.02■■□□□ 1.12
HDDC2-206ENST00000608461 DNMT1P26358 1616 aaKnown RBP22.02■■□□□ 1.11
HDDC2-206ENST00000608461 ABCC5O15440 1437 aa21.99■■□□□ 1.11
HDDC2-206ENST00000608461 DAPK1P53355 1430 aa21.99■■□□□ 1.11
HDDC2-206ENST00000608461 CROCC2H7BZ55 1655 aa21.99■■□□□ 1.11
HDDC2-206ENST00000608461 ESF1Q9H501 851 aaKnown RBP21.99■■□□□ 1.11
HDDC2-206ENST00000608461 CNTLNQ9NXG0 1405 aa21.98■■□□□ 1.11
HDDC2-206ENST00000608461 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.95■■□□□ 1.12e-9■□□□□ 11.3
HDDC2-206ENST00000608461 FAM50AQ14320 339 aaKnown RBP21.93■■□□□ 1.1
HDDC2-206ENST00000608461 DUOX2Q9NRD8 1548 aa21.92■■□□□ 1.1
HDDC2-206ENST00000608461 FAM135AQ9P2D6 1515 aa21.92■■□□□ 1.1
HDDC2-206ENST00000608461 MROH2AA6NES4 1674 aa21.91■■□□□ 1.1
HDDC2-206ENST00000608461 EIF2AK4Q9P2K8 1649 aaKnown RBP21.91■■□□□ 1.1
HDDC2-206ENST00000608461 ANKRD30AQ9BXX3 1397 aa21.9■■□□□ 1.1
HDDC2-206ENST00000608461 KIF3BO15066 747 aa21.9■■□□□ 1.1
HDDC2-206ENST00000608461 GGT6Q6P531 493 aa21.9■■□□□ 1.1
HDDC2-206ENST00000608461 KIF15Q9NS87 1388 aa21.88■■□□□ 1.09
HDDC2-206ENST00000608461 PPARGC1BQ86YN6 1023 aaKnown RBP21.88■■□□□ 1.09
HDDC2-206ENST00000608461 ADGRL2O95490 1459 aa21.88■■□□□ 1.09
HDDC2-206ENST00000608461 NCOA1Q15788 1441 aa21.87■■□□□ 1.09
HDDC2-206ENST00000608461 ERBINQ96RT1 1412 aa21.87■■□□□ 1.09
HDDC2-206ENST00000608461 ZMYM3Q14202 1370 aa21.85■■□□□ 1.09
HDDC2-206ENST00000608461 C3P01024 1663 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms