RNA–Protein interactions for RNA: ENST00000607632.1

PRDM16-210, Transcript of PR/SET domain 16, humanhuman

TSL 2

Gene PRDM16, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-210ENST00000607632 CDC42BPAQ5VT25 1732 aa22.96■■□□□ 1.27
PRDM16-210ENST00000607632 KDM4FA0A1W2PPD8 638 aa22.96■■□□□ 1.27
PRDM16-210ENST00000607632 EFCAB2Q5VUJ9 269 aa22.95■■□□□ 1.26
PRDM16-210ENST00000607632 ARHGAP5Q13017 1502 aa22.94■■□□□ 1.26
PRDM16-210ENST00000607632 POGZQ7Z3K3 1410 aa22.93■■□□□ 1.26
PRDM16-210ENST00000607632 EHBP1L1Q8N3D4 1523 aa22.92■■□□□ 1.26
PRDM16-210ENST00000607632 ARHGEF40Q8TER5 1519 aa22.92■■□□□ 1.26
PRDM16-210ENST00000607632 SCAPERQ9BY12 1400 aa22.92■■□□□ 1.26
PRDM16-210ENST00000607632 MAGI2Q86UL8 1455 aa22.91■■□□□ 1.26
PRDM16-210ENST00000607632 TIAM1Q13009 1591 aa22.89■■□□□ 1.26
PRDM16-210ENST00000607632 GPATCH8Q9UKJ3 1502 aaKnown RBP22.89■■□□□ 1.26
PRDM16-210ENST00000607632 MTUS2Q5JR59 1369 aa22.89■■□□□ 1.25
PRDM16-210ENST00000607632 ABCC1P33527 1531 aa22.88■■□□□ 1.25
PRDM16-210ENST00000607632 KDM5CP41229 1560 aa22.88■■□□□ 1.25
PRDM16-210ENST00000607632 MAP3K1Q13233 1512 aa22.87■■□□□ 1.25
PRDM16-210ENST00000607632 ZNF518AQ6AHZ1 1483 aa22.85■■□□□ 1.25
PRDM16-210ENST00000607632 ZFYVE16Q7Z3T8 1539 aa22.84■■□□□ 1.25
PRDM16-210ENST00000607632 ITSN2Q9NZM3 1697 aa22.84■■□□□ 1.25
PRDM16-210ENST00000607632 ARHGEF12Q9NZN5 1544 aa22.83■■□□□ 1.25
PRDM16-210ENST00000607632 SAMD9LQ8IVG5 1584 aa22.82■■□□□ 1.24
PRDM16-210ENST00000607632 YEATS2Q9ULM3 1422 aa22.82■■□□□ 1.24
PRDM16-210ENST00000607632 SUPT6HQ7KZ85 1726 aaKnown RBP22.79■■□□□ 1.24
PRDM16-210ENST00000607632 CCNB3Q8WWL7 1395 aa22.78■■□□□ 1.24
PRDM16-210ENST00000607632 ADAMTSL3P82987 1691 aa22.78■■□□□ 1.24
PRDM16-210ENST00000607632 LRRC9Q6ZRR7 1453 aa22.78■■□□□ 1.24
PRDM16-210ENST00000607632 BCORL1Q5H9F3 1711 aa22.77■■□□□ 1.24
PRDM16-210ENST00000607632 SIGLEC1Q9BZZ2 1709 aa22.77■■□□□ 1.24
PRDM16-210ENST00000607632 HECW2Q9P2P5 1572 aa22.77■■□□□ 1.24
PRDM16-210ENST00000607632 MLH3Q9UHC1 1453 aa22.77■■□□□ 1.24
PRDM16-210ENST00000607632 KIAA1107Q9UPP5 1409 aa22.76■■□□□ 1.23
PRDM16-210ENST00000607632 TRAPPC8Q9Y2L5 1435 aa22.76■■□□□ 1.23
PRDM16-210ENST00000607632 NCOA2Q15596 1464 aa22.75■■□□□ 1.23
PRDM16-210ENST00000607632 PLEKHH2Q8IVE3 1493 aa22.75■■□□□ 1.23
PRDM16-210ENST00000607632 AFAP1Q8N556 730 aa22.74■■□□□ 1.23
PRDM16-210ENST00000607632 SYCP2Q9BX26 1530 aa22.73■■□□□ 1.23
PRDM16-210ENST00000607632 REREQ9P2R6 1566 aa22.73■■□□□ 1.23
PRDM16-210ENST00000607632 ATP10AO60312 1499 aa22.73■■□□□ 1.23
PRDM16-210ENST00000607632 CFDP1Q9UEE9 299 aaPredicted RBP22.72■■□□□ 1.23
PRDM16-210ENST00000607632 DIP2CQ9Y2E4 1556 aa22.72■■□□□ 1.23
PRDM16-210ENST00000607632 C9orf84Q5VXU9 1444 aa22.7■■□□□ 1.22
PRDM16-210ENST00000607632 KIDINS220Q9ULH0 1771 aa22.7■■□□□ 1.22
PRDM16-210ENST00000607632 ABCA6Q8N139 1617 aa22.69■■□□□ 1.22
PRDM16-210ENST00000607632 MBD5Q9P267 1494 aa22.66■■□□□ 1.22
PRDM16-210ENST00000607632 KANK4Q5T7N3 995 aaPredicted RBP22.66■■□□□ 1.22
PRDM16-210ENST00000607632 MADDQ8WXG6 1647 aa22.65■■□□□ 1.22
PRDM16-210ENST00000607632 INO80Q9ULG1 1556 aaPredicted RBP22.65■■□□□ 1.22
PRDM16-210ENST00000607632 ZNF777Q9ULD5 760 aaPredicted RBP22.65■■□□□ 1.22
PRDM16-210ENST00000607632 AGLP35573 1532 aa22.62■■□□□ 1.21
PRDM16-210ENST00000607632 HNRNPMP52272 730 aaKnown RBP eCLIP22.62■■□□□ 1.21
PRDM16-210ENST00000607632 ARID4BQ4LE39 1312 aaPredicted RBP22.61■■□□□ 1.21
PRDM16-210ENST00000607632 PTPRMP28827 1452 aa22.61■■□□□ 1.21
PRDM16-210ENST00000607632 CAMSAP2Q08AD1 1489 aa22.6■■□□□ 1.21
PRDM16-210ENST00000607632 ZNF644Q9H582 1327 aaPredicted RBP22.6■■□□□ 1.21
PRDM16-210ENST00000607632 ATP7AQ04656 1500 aa22.6■■□□□ 1.21
PRDM16-210ENST00000607632 MIA2Q96PC5 1412 aa22.57■■□□□ 1.2
PRDM16-210ENST00000607632 ARHGEF5Q12774 1597 aa22.57■■□□□ 1.2
PRDM16-210ENST00000607632 MYOM3Q5VTT5 1437 aa22.57■■□□□ 1.2
PRDM16-210ENST00000607632 SPAG9O60271 1321 aaKnown RBP22.57■■□□□ 1.2
PRDM16-210ENST00000607632 RIMS1Q86UR5 1692 aaKnown RBP22.56■■□□□ 1.2
PRDM16-210ENST00000607632 RTEL1-TNFRSF6BF6WH68 1400 aa22.56■■□□□ 1.2
PRDM16-210ENST00000607632 PLXNC1O60486 1568 aa22.55■■□□□ 1.2
PRDM16-210ENST00000607632 FER1L4A9Z1Z3 1794 aa22.55■■□□□ 1.2
PRDM16-210ENST00000607632 CCDC141Q6ZP82 1450 aa22.54■■□□□ 1.2
PRDM16-210ENST00000607632 APLP2Q06481 763 aa22.52■■□□□ 1.2
PRDM16-210ENST00000607632 RSPH4AQ5TD94 716 aa22.52■■□□□ 1.2
PRDM16-210ENST00000607632 MYT1LQ9UL68 1186 aa22.51■■□□□ 1.19
PRDM16-210ENST00000607632 ADGBQ8N7X0 1667 aa22.51■■□□□ 1.19
PRDM16-210ENST00000607632 A2MP01023 1474 aa22.48■■□□□ 1.19
PRDM16-210ENST00000607632 MAST1Q9Y2H9 1570 aa22.47■■□□□ 1.19
PRDM16-210ENST00000607632 ILDR1Q86SU0 546 aaPredicted RBP22.46■■□□□ 1.19
PRDM16-210ENST00000607632 MLECQ14165 292 aa22.45■■□□□ 1.18
PRDM16-210ENST00000607632 PTPN23Q9H3S7 1636 aa22.43■■□□□ 1.18
PRDM16-210ENST00000607632 TCOF1Q13428 1488 aaKnown RBP22.43■■□□□ 1.18
PRDM16-210ENST00000607632 FGD6Q6ZV73 1430 aa22.41■■□□□ 1.18
PRDM16-210ENST00000607632 DHX29Q7Z478 1369 aaKnown RBP22.39■■□□□ 1.18
PRDM16-210ENST00000607632 MROH2AA6NES4 1674 aa22.38■■□□□ 1.17
PRDM16-210ENST00000607632 CROCC2H7BZ55 1655 aa22.38■■□□□ 1.17
PRDM16-210ENST00000607632 CNTLNQ9NXG0 1405 aa22.38■■□□□ 1.17
PRDM16-210ENST00000607632 C3P01024 1663 aa22.36■■□□□ 1.17
PRDM16-210ENST00000607632 LMTK3Q96Q04 1460 aa22.36■■□□□ 1.17
PRDM16-210ENST00000607632 SHANK2Q9UPX8 1470 aa22.36■■□□□ 1.17
PRDM16-210ENST00000607632 DNMT1P26358 1616 aaKnown RBP22.35■■□□□ 1.17
PRDM16-210ENST00000607632 TSPY4P0CV99 314 aa22.35■■□□□ 1.17
PRDM16-210ENST00000607632 TSPY10P0CW01 314 aa22.35■■□□□ 1.17
PRDM16-210ENST00000607632 ABCC5O15440 1437 aa22.33■■□□□ 1.17
PRDM16-210ENST00000607632 FAM135AQ9P2D6 1515 aa22.31■■□□□ 1.16
PRDM16-210ENST00000607632 PPP6R1Q9UPN7 881 aa22.31■■□□□ 1.16
PRDM16-210ENST00000607632 DAPK1P53355 1430 aa22.31■■□□□ 1.16
PRDM16-210ENST00000607632 PREX1Q8TCU6 1659 aa22.3■■□□□ 1.16
PRDM16-210ENST00000607632 SETD1BQ9UPS6 1966 aaKnown RBP22.29■■□□□ 1.16
PRDM16-210ENST00000607632 EIF2AK4Q9P2K8 1649 aaKnown RBP22.29■■□□□ 1.16
PRDM16-210ENST00000607632 CLTCQ00610 1675 aaKnown RBP22.28■■□□□ 1.16
PRDM16-210ENST00000607632 CEBPAP49715 358 aaPredicted RBP22.27■■□□□ 1.16
PRDM16-210ENST00000607632 RNF17Q9BXT8 1623 aaKnown RBP22.27■■□□□ 1.16
PRDM16-210ENST00000607632 DUOX2Q9NRD8 1548 aa22.26■■□□□ 1.15
PRDM16-210ENST00000607632 ESF1Q9H501 851 aaKnown RBP22.25■■□□□ 1.15
PRDM16-210ENST00000607632 ZMYM3Q14202 1370 aa22.25■■□□□ 1.15
PRDM16-210ENST00000607632 NPATQ14207 1427 aa22.24■■□□□ 1.15
PRDM16-210ENST00000607632 GGT6Q6P531 493 aa22.23■■□□□ 1.15
PRDM16-210ENST00000607632 KIF3BO15066 747 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms