RNA–Protein interactions for RNA: ENST00000607607.5

LINC00240-204, long intergenic non-protein coding RNA 240, humanhuman

TSL 1 (best) BASIC

Gene LINC00240, Length 5,607 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00240-204ENST00000607607 SPRYD3Q8NCJ5 442 aa7.52□□□□□ -1.21
LINC00240-204ENST00000607607 CUX2O14529 1486 aa7.52□□□□□ -1.21
LINC00240-204ENST00000607607 GOLGA3Q08378 1498 aa7.52□□□□□ -1.21
LINC00240-204ENST00000607607 ZBTB9Q96C00 473 aa7.52□□□□□ -1.21
LINC00240-204ENST00000607607 SLKQ9H2G2 1235 aaPredicted RBP7.52□□□□□ -1.21
LINC00240-204ENST00000607607 CERS3Q8IU89 383 aa7.51□□□□□ -1.21
LINC00240-204ENST00000607607 C8orf34Q49A92 452 aa7.51□□□□□ -1.21
LINC00240-204ENST00000607607 PRKRIP1Q9H875 184 aaPredicted RBP7.51□□□□□ -1.21
LINC00240-204ENST00000607607 IGSF3O75054 1194 aa7.5□□□□□ -1.21
LINC00240-204ENST00000607607 HSPA5P11021 654 aaKnown RBP7.5□□□□□ -1.21
LINC00240-204ENST00000607607 RRBP1Q9P2E9 1410 aaKnown RBP7.5□□□□□ -1.21
LINC00240-204ENST00000607607 TSC1Q92574 1164 aa7.5□□□□□ -1.21
LINC00240-204ENST00000607607 SMG6Q86US8 1419 aaKnown RBP7.49□□□□□ -1.21
LINC00240-204ENST00000607607 ZBTB7CA1YPR0 619 aa7.49□□□□□ -1.21
LINC00240-204ENST00000607607 USP19O94966 1318 aa7.49□□□□□ -1.21
LINC00240-204ENST00000607607 SMARCA2P51531 1590 aa7.49□□□□□ -1.21
LINC00240-204ENST00000607607 ARAP1Q96P48 1450 aa7.49□□□□□ -1.21
LINC00240-204ENST00000607607 CHMP4CQ96CF2 233 aa7.48□□□□□ -1.21
LINC00240-204ENST00000607607 NUDCQ9Y266 331 aa7.48□□□□□ -1.21
LINC00240-204ENST00000607607 CDCA7LQ96GN5 454 aa7.48□□□□□ -1.21
LINC00240-204ENST00000607607 FAM13BQ9NYF5 915 aa7.48□□□□□ -1.21
LINC00240-204ENST00000607607 GAS2L3Q86XJ1 694 aa7.48□□□□□ -1.21
LINC00240-204ENST00000607607 PDCL3Q9H2J4 239 aa7.48□□□□□ -1.21
LINC00240-204ENST00000607607 FAM177BA6PVY3 158 aa7.47□□□□□ -1.21
LINC00240-204ENST00000607607 KIAA1211Q6ZU35 1233 aa7.47□□□□□ -1.21
LINC00240-204ENST00000607607 AQRO60306 1485 aaKnown RBP eCLIP7.47□□□□□ -1.21
LINC00240-204ENST00000607607 FSD2A1L4K1 749 aa7.46□□□□□ -1.21
LINC00240-204ENST00000607607 CCNB3Q8WWL7 1395 aa7.46□□□□□ -1.21
LINC00240-204ENST00000607607 E9PSI1 815 aa7.46□□□□□ -1.21
LINC00240-204ENST00000607607 ZFP91Q96JP5 570 aaPredicted RBP7.46□□□□□ -1.21
LINC00240-204ENST00000607607 CHMP4AQ9BY43 222 aa7.46□□□□□ -1.21
LINC00240-204ENST00000607607 TCERG1O14776 1098 aaKnown RBP7.46□□□□□ -1.22
LINC00240-204ENST00000607607 ZSCAN20P17040 1043 aaPredicted RBP7.46□□□□□ -1.22
LINC00240-204ENST00000607607 RRP1P56182 461 aaKnown RBP7.45□□□□□ -1.22
LINC00240-204ENST00000607607 TAF7LQ5H9L4 462 aa7.45□□□□□ -1.22
LINC00240-204ENST00000607607 CRBNQ96SW2 442 aa7.45□□□□□ -1.22
LINC00240-204ENST00000607607 ANTXR1Q9H6X2 564 aa7.44□□□□□ -1.22
LINC00240-204ENST00000607607 ESPNB1AK53 854 aa7.43□□□□□ -1.22
LINC00240-204ENST00000607607 CENPJQ9HC77 1338 aaPredicted RBP7.43□□□□□ -1.22
LINC00240-204ENST00000607607 TMC1Q8TDI8 760 aa7.43□□□□□ -1.22
LINC00240-204ENST00000607607 SECISBP2LQ93073 1101 aaKnown RBP7.43□□□□□ -1.22
LINC00240-204ENST00000607607 PPP4R3BQ5MIZ7 849 aa7.42□□□□□ -1.22
LINC00240-204ENST00000607607 IPO4Q8TEX9 1081 aaKnown RBP7.42□□□□□ -1.22
LINC00240-204ENST00000607607 SETD5Q9C0A6 1442 aa7.42□□□□□ -1.22
LINC00240-204ENST00000607607 CNTLNQ9NXG0 1405 aa7.41□□□□□ -1.22
LINC00240-204ENST00000607607 KCNG1Q9UIX4 513 aa7.41□□□□□ -1.22
LINC00240-204ENST00000607607 CEP164Q9UPV0 1460 aa7.41□□□□□ -1.22
LINC00240-204ENST00000607607 CANXP27824 592 aaKnown RBP7.41□□□□□ -1.22
LINC00240-204ENST00000607607 MLECQ14165 292 aa7.41□□□□□ -1.22
LINC00240-204ENST00000607607 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.41□□□□□ -1.22
LINC00240-204ENST00000607607 PHLDB1Q86UU1 1377 aa7.41□□□□□ -1.22
LINC00240-204ENST00000607607 NCOA2Q15596 1464 aa7.4□□□□□ -1.22
LINC00240-204ENST00000607607 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.4□□□□□ -1.22
LINC00240-204ENST00000607607 P3H3Q8IVL6 736 aa7.4□□□□□ -1.22
LINC00240-204ENST00000607607 FAM50AQ14320 339 aaKnown RBP7.4□□□□□ -1.23
LINC00240-204ENST00000607607 ATP2B3Q16720 1220 aa7.39□□□□□ -1.23
LINC00240-204ENST00000607607 DMTNQ08495 405 aa7.39□□□□□ -1.23
LINC00240-204ENST00000607607 KDM2BQ8NHM5 1336 aa7.39□□□□□ -1.23
LINC00240-204ENST00000607607 R3HCC1Q9Y3T6 440 aaKnown RBP7.39□□□□□ -1.23
LINC00240-204ENST00000607607 SYNJ1O43426 1573 aa7.39□□□□□ -1.23
LINC00240-204ENST00000607607 NLRP1Q9C000 1473 aa7.39□□□□□ -1.23
LINC00240-204ENST00000607607 PANK3Q9H999 370 aa7.39□□□□□ -1.23
LINC00240-204ENST00000607607 GOLGA6L3A6NEY3 463 aa7.38□□□□□ -1.23
LINC00240-204ENST00000607607 CBX1P83916 185 aa7.38□□□□□ -1.23
LINC00240-204ENST00000607607 RSPH4AQ5TD94 716 aa7.38□□□□□ -1.23
LINC00240-204ENST00000607607 XPCQ01831 940 aaPredicted RBP7.38□□□□□ -1.23
LINC00240-204ENST00000607607 NGEFQ8N5V2 710 aa7.38□□□□□ -1.23
LINC00240-204ENST00000607607 SLC52A1Q9NWF4 448 aa7.38□□□□□ -1.23
LINC00240-204ENST00000607607 MS4A1P11836 297 aa7.37□□□□□ -1.23
LINC00240-204ENST00000607607 DENND4BO75064 1496 aaPredicted RBP7.37□□□□□ -1.23
LINC00240-204ENST00000607607 KIF7Q2M1P5 1343 aa7.37□□□□□ -1.23
LINC00240-204ENST00000607607 DHX29Q7Z478 1369 aaKnown RBP7.37□□□□□ -1.23
LINC00240-204ENST00000607607 ZNF710Q8N1W2 664 aa7.37□□□□□ -1.23
LINC00240-204ENST00000607607 PRR29P0C7W0 189 aa7.36□□□□□ -1.23
LINC00240-204ENST00000607607 NBPF8Q3BBV2 869 aa7.36□□□□□ -1.23
LINC00240-204ENST00000607607 POLR3GLQ9BT43 218 aa7.36□□□□□ -1.23
LINC00240-204ENST00000607607 GRPEL1Q9HAV7 217 aa7.36□□□□□ -1.23
LINC00240-204ENST00000607607 CCDC7Q96M83 1385 aa7.36□□□□□ -1.23
LINC00240-204ENST00000607607 PNISRQ8TF01 805 aaKnown RBP7.36□□□□□ -1.23
LINC00240-204ENST00000607607 RCAN3Q9UKA8 241 aa7.36□□□□□ -1.23
LINC00240-204ENST00000607607 PTPRKQ15262 1439 aa7.36□□□□□ -1.23
LINC00240-204ENST00000607607 MYOM3Q5VTT5 1437 aa7.36□□□□□ -1.23
LINC00240-204ENST00000607607 SPDYE4A6NLX3 237 aa7.36□□□□□ -1.23
LINC00240-204ENST00000607607 TONSLQ96HA7 1378 aa7.35□□□□□ -1.23
LINC00240-204ENST00000607607 SMAP1Q8IYB5 467 aaPredicted RBP7.35□□□□□ -1.23
LINC00240-204ENST00000607607 MPNDQ8N594 471 aa7.35□□□□□ -1.23
LINC00240-204ENST00000607607 UQCRHLA0A096LP55 91 aa7.34□□□□□ -1.23
LINC00240-204ENST00000607607 UQCRHP07919 91 aa7.34□□□□□ -1.23
LINC00240-204ENST00000607607 BCORL1Q5H9F3 1711 aa7.34□□□□□ -1.23
LINC00240-204ENST00000607607 MAP3K1Q13233 1512 aa7.34□□□□□ -1.23
LINC00240-204ENST00000607607 IGHDP01880 384 aa7.34□□□□□ -1.23
LINC00240-204ENST00000607607 EP400NLQ6ZTU2 488 aa7.34□□□□□ -1.23
LINC00240-204ENST00000607607 TBC1D2Q9BYX2 928 aa7.34□□□□□ -1.23
LINC00240-204ENST00000607607 BAZ1AQ9NRL2 1556 aaPredicted RBP7.33□□□□□ -1.24
LINC00240-204ENST00000607607 TRAK2O60296 914 aa7.33□□□□□ -1.24
LINC00240-204ENST00000607607 TPM2P07951 284 aa7.33□□□□□ -1.24
LINC00240-204ENST00000607607 AEBP1Q8IUX7 1158 aa7.33□□□□□ -1.24
LINC00240-204ENST00000607607 ANP32BQ92688 251 aaKnown RBP7.33□□□□□ -1.24
LINC00240-204ENST00000607607 NCOA1Q15788 1441 aa7.33□□□□□ -1.24
LINC00240-204ENST00000607607 FAM161AQ3B820 660 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms