RNA–Protein interactions for RNA: ENST00000606476.1

LINC00993-204, long intergenic non-protein coding RNA 993, humanhuman

TSL 5 BASIC

Gene LINC00993, Length 500 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00993-204ENST00000606476 MKRN3Q13064 507 aaKnown RBP8.14□□□□□ -1.11
LINC00993-204ENST00000606476 NESP48681 1621 aa8.14□□□□□ -1.11
LINC00993-204ENST00000606476 A0A0G2JS52 829 aa8.13□□□□□ -1.11
LINC00993-204ENST00000606476 NUBP1P53384 320 aa8.12□□□□□ -1.11
LINC00993-204ENST00000606476 ZSWIM6Q9HCJ5 1215 aa8.12□□□□□ -1.11
LINC00993-204ENST00000606476 WIZO95785 1651 aa8.11□□□□□ -1.11
LINC00993-204ENST00000606476 PEG3Q9GZU2 1588 aa8.1□□□□□ -1.11
LINC00993-204ENST00000606476 MIER1Q8N108 512 aa8.09□□□□□ -1.11
LINC00993-204ENST00000606476 AXIN2Q9Y2T1 843 aa8.09□□□□□ -1.11
LINC00993-204ENST00000606476 BOLA1Q9Y3E2 137 aa8.09□□□□□ -1.11
LINC00993-204ENST00000606476 IFFO2Q5TF58 517 aa8.08□□□□□ -1.12
LINC00993-204ENST00000606476 ILDR1Q86SU0 546 aaPredicted RBP8.08□□□□□ -1.12
LINC00993-204ENST00000606476 RSF1Q96T23 1441 aaPredicted RBP8.08□□□□□ -1.12
LINC00993-204ENST00000606476 ZNF316A6NFI3 1004 aaPredicted RBP8.07□□□□□ -1.12
LINC00993-204ENST00000606476 PLEKHG5O94827 1062 aa8.07□□□□□ -1.12
LINC00993-204ENST00000606476 GOLGA2Q08379 1002 aa8.07□□□□□ -1.12
LINC00993-204ENST00000606476 ARSIQ5FYB1 569 aa8.05□□□□□ -1.12
LINC00993-204ENST00000606476 TRAF7Q6Q0C0 670 aa8.05□□□□□ -1.12
LINC00993-204ENST00000606476 ZNF775Q96BV0 537 aaPredicted RBP8.05□□□□□ -1.12
LINC00993-204ENST00000606476 CADPSQ9ULU8 1353 aa8.03□□□□□ -1.12
LINC00993-204ENST00000606476 KHSRPQ92945 711 aaKnown RBP eCLIP8.03□□□□□ -1.12
LINC00993-204ENST00000606476 KCTD12Q96CX2 325 aaKnown RBP8.03□□□□□ -1.12
LINC00993-204ENST00000606476 PDS5BQ9NTI5 1447 aa8.03□□□□□ -1.12
LINC00993-204ENST00000606476 CUX2O14529 1486 aa8.02□□□□□ -1.13
LINC00993-204ENST00000606476 G3V3G9 751 aa8.02□□□□□ -1.13
LINC00993-204ENST00000606476 PYGBP11216 843 aa8.02□□□□□ -1.13
LINC00993-204ENST00000606476 PBX2P40425 430 aa8.02□□□□□ -1.13
LINC00993-204ENST00000606476 DCAF8Q5TAQ9 597 aa8.02□□□□□ -1.13
LINC00993-204ENST00000606476 ADGRD1Q6QNK2 874 aa8.02□□□□□ -1.13
LINC00993-204ENST00000606476 LAMC3Q9Y6N6 1575 aa8.01□□□□□ -1.13
LINC00993-204ENST00000606476 FAM212AQ96EL1 285 aa8.01□□□□□ -1.13
LINC00993-204ENST00000606476 TOP2AP11388 1531 aaKnown RBP7.99□□□□□ -1.13
LINC00993-204ENST00000606476 KIF21AQ7Z4S6 1674 aa7.97□□□□□ -1.13
LINC00993-204ENST00000606476 SUPT5HO00267 1087 aaKnown RBP7.96□□□□□ -1.14
LINC00993-204ENST00000606476 TMEM92Q6UXU6 159 aa7.96□□□□□ -1.14
LINC00993-204ENST00000606476 FANCD2Q9BXW9 1451 aa7.95□□□□□ -1.14
LINC00993-204ENST00000606476 CEP164Q9UPV0 1460 aa7.95□□□□□ -1.14
LINC00993-204ENST00000606476 THOC2Q8NI27 1593 aaKnown RBP7.95□□□□□ -1.14
LINC00993-204ENST00000606476 MRC2Q9UBG0 1479 aa7.94□□□□□ -1.14
LINC00993-204ENST00000606476 PTPN5P54829 565 aa7.94□□□□□ -1.14
LINC00993-204ENST00000606476 ZNF787Q6DD87 383 aa7.94□□□□□ -1.14
LINC00993-204ENST00000606476 CCDC88BA6NC98 1476 aa7.94□□□□□ -1.14
LINC00993-204ENST00000606476 DNAJC5Q9H3Z4 198 aa7.93□□□□□ -1.14
LINC00993-204ENST00000606476 CFTRP13569 1480 aa7.93□□□□□ -1.14
LINC00993-204ENST00000606476 HRO43593 1189 aa7.92□□□□□ -1.14
LINC00993-204ENST00000606476 PROM2Q8N271 834 aa7.91□□□□□ -1.14
LINC00993-204ENST00000606476 WDR62O43379 1518 aa7.88□□□□□ -1.15
LINC00993-204ENST00000606476 LAPTM4AQ15012 233 aa7.88□□□□□ -1.15
LINC00993-204ENST00000606476 URB2Q14146 1524 aaKnown RBP7.86□□□□□ -1.15
LINC00993-204ENST00000606476 GFRA3O60609 400 aa7.85□□□□□ -1.15
LINC00993-204ENST00000606476 PLCD3Q8N3E9 789 aa7.84□□□□□ -1.15
LINC00993-204ENST00000606476 PSEN1P49768 467 aa7.82□□□□□ -1.16
LINC00993-204ENST00000606476 TK2O00142 265 aa7.81□□□□□ -1.16
LINC00993-204ENST00000606476 ARHGAP33O14559 1287 aa7.81□□□□□ -1.16
LINC00993-204ENST00000606476 DMRTA1Q5VZB9 504 aa7.81□□□□□ -1.16
LINC00993-204ENST00000606476 LHX6Q9UPM6 363 aa7.81□□□□□ -1.16
LINC00993-204ENST00000606476 TOPBP1Q92547 1522 aa7.79□□□□□ -1.16
LINC00993-204ENST00000606476 NUDT7P0C024 238 aa7.79□□□□□ -1.16
LINC00993-204ENST00000606476 ZNF467Q7Z7K2 595 aaPredicted RBP7.78□□□□□ -1.16
LINC00993-204ENST00000606476 ZBTB47Q9UFB7 747 aaPredicted RBP7.78□□□□□ -1.16
LINC00993-204ENST00000606476 PRDM2Q13029 1718 aa7.78□□□□□ -1.16
LINC00993-204ENST00000606476 ZNF608Q9ULD9 1512 aaPredicted RBP7.78□□□□□ -1.16
LINC00993-204ENST00000606476 TRIM41Q8WV44 630 aa7.77□□□□□ -1.17
LINC00993-204ENST00000606476 DNMBPQ6XZF7 1577 aa7.76□□□□□ -1.17
LINC00993-204ENST00000606476 IFT140Q96RY7 1462 aa7.76□□□□□ -1.17
LINC00993-204ENST00000606476 CABP2Q9NPB3 220 aa7.75□□□□□ -1.17
LINC00993-204ENST00000606476 ABCC8Q09428 1581 aa7.75□□□□□ -1.17
LINC00993-204ENST00000606476 PSEN2P49810 448 aa7.74□□□□□ -1.17
LINC00993-204ENST00000606476 MICALL2Q8IY33 904 aa7.74□□□□□ -1.17
LINC00993-204ENST00000606476 AQRO60306 1485 aaKnown RBP eCLIP7.74□□□□□ -1.17
LINC00993-204ENST00000606476 RAD54L2Q9Y4B4 1467 aa7.74□□□□□ -1.17
LINC00993-204ENST00000606476 STAC3Q96MF2 364 aa7.73□□□□□ -1.17
LINC00993-204ENST00000606476 TDRD9Q8NDG6 1382 aaKnown RBP7.72□□□□□ -1.17
LINC00993-204ENST00000606476 SOGA1O94964 1423 aa7.72□□□□□ -1.17
LINC00993-204ENST00000606476 POLA1P09884 1462 aaPredicted RBP7.72□□□□□ -1.17
LINC00993-204ENST00000606476 FGD5Q6ZNL6 1462 aa7.71□□□□□ -1.18
LINC00993-204ENST00000606476 THSD4Q6ZMP0 1018 aa7.71□□□□□ -1.18
LINC00993-204ENST00000606476 CUX1P39880 1505 aa7.7□□□□□ -1.18
LINC00993-204ENST00000606476 LCE2AQ5TA79 106 aaPredicted RBP7.7□□□□□ -1.18
LINC00993-204ENST00000606476 EHMT2Q96KQ7 1210 aa7.7□□□□□ -1.18
LINC00993-204ENST00000606476 EIF4G3O43432 1585 aaKnown RBP7.7□□□□□ -1.18
LINC00993-204ENST00000606476 NRG2O14511 850 aaPredicted RBP7.69□□□□□ -1.18
LINC00993-204ENST00000606476 SUZ12Q15022 739 aaKnown RBP7.67□□□□□ -1.18
LINC00993-204ENST00000606476 TARBP1Q13395 1621 aaKnown RBP7.67□□□□□ -1.18
LINC00993-204ENST00000606476 CHMP7Q8WUX9 453 aaPredicted RBP7.66□□□□□ -1.18
LINC00993-204ENST00000606476 SNAPC4Q5SXM2 1469 aa7.65□□□□□ -1.18
LINC00993-204ENST00000606476 WRNQ14191 1432 aaPredicted RBP eCLIP7.64□□□□□ -1.19
LINC00993-204ENST00000606476 TREML4Q6UXN2 200 aa7.64□□□□□ -1.19
LINC00993-204ENST00000606476 STK17AQ9UEE5 414 aa7.64□□□□□ -1.19
LINC00993-204ENST00000606476 ITGBL1O95965 494 aaPredicted RBP7.63□□□□□ -1.19
LINC00993-204ENST00000606476 GRIN2BQ13224 1484 aa7.62□□□□□ -1.19
LINC00993-204ENST00000606476 GAPVD1Q14C86 1478 aa7.62□□□□□ -1.19
LINC00993-204ENST00000606476 PDAP1Q13442 181 aaKnown RBP7.61□□□□□ -1.19
LINC00993-204ENST00000606476 CYB5RLQ6IPT4 315 aa7.61□□□□□ -1.19
LINC00993-204ENST00000606476 CHD1O14646 1710 aa7.61□□□□□ -1.19
LINC00993-204ENST00000606476 SYNJ1O43426 1573 aa7.6□□□□□ -1.19
LINC00993-204ENST00000606476 ARHGEF11O15085 1522 aa7.59□□□□□ -1.19
LINC00993-204ENST00000606476 ABCA10Q8WWZ4 1543 aa7.59□□□□□ -1.19
LINC00993-204ENST00000606476 POTECB2RU33 542 aa7.59□□□□□ -1.19
LINC00993-204ENST00000606476 MAGI1Q96QZ7 1491 aaPredicted RBP7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms