RNA–Protein interactions for RNA: ENST00000605358.5

CCDC12-212, Transcript of coiled-coil domain containing 12, humanhuman

TSL 5

Gene CCDC12, Length 402 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-212ENST00000605358 RIMS1Q86UR5 1692 aaKnown RBP29.32■■■□□ 2.28
CCDC12-212ENST00000605358 YEATS2Q9ULM3 1422 aa29.31■■■□□ 2.28
CCDC12-212ENST00000605358 MYO5CQ9NQX4 1742 aa29.31■■■□□ 2.28
CCDC12-212ENST00000605358 LMTK3Q96Q04 1460 aa29.3■■■□□ 2.28
CCDC12-212ENST00000605358 TROQ12816 1431 aaPredicted RBP29.28■■■□□ 2.28
CCDC12-212ENST00000605358 FBXO41Q8TF61 875 aa29.27■■■□□ 2.28
CCDC12-212ENST00000605358 ATP10AO60312 1499 aa29.26■■■□□ 2.27
CCDC12-212ENST00000605358 KIF14Q15058 1648 aa29.26■■■□□ 2.27
CCDC12-212ENST00000605358 CLIP1P30622 1438 aa29.26■■■□□ 2.27
CCDC12-212ENST00000605358 EHMT2Q96KQ7 1210 aa29.23■■■□□ 2.27
CCDC12-212ENST00000605358 ZNF518AQ6AHZ1 1483 aa29.22■■■□□ 2.27
CCDC12-212ENST00000605358 C9orf84Q5VXU9 1444 aa29.21■■■□□ 2.27
CCDC12-212ENST00000605358 SIGLEC1Q9BZZ2 1709 aa29.21■■■□□ 2.27
CCDC12-212ENST00000605358 FER1L4A9Z1Z3 1794 aa29.17■■■□□ 2.26
CCDC12-212ENST00000605358 ARHGAP5Q13017 1502 aa29.16■■■□□ 2.26
CCDC12-212ENST00000605358 ARHGEF12Q9NZN5 1544 aa29.15■■■□□ 2.26
CCDC12-212ENST00000605358 KDM5CP41229 1560 aa29.14■■■□□ 2.26
CCDC12-212ENST00000605358 MLECQ14165 292 aa29.14■■■□□ 2.26
CCDC12-212ENST00000605358 CCDC18Q5T9S5 1454 aa29.14■■■□□ 2.26
CCDC12-212ENST00000605358 CASKIN1Q8WXD9 1431 aa29.13■■■□□ 2.25
CCDC12-212ENST00000605358 LRRIQ1Q96JM4 1722 aa29.12■■■□□ 2.25
CCDC12-212ENST00000605358 AFAP1Q8N556 730 aa29.09■■■□□ 2.25
CCDC12-212ENST00000605358 HSPA2P54652 639 aa29.07■■■□□ 2.24
CCDC12-212ENST00000605358 REREQ9P2R6 1566 aa29.07■■■□□ 2.24
CCDC12-212ENST00000605358 MLH3Q9UHC1 1453 aa29.07■■■□□ 2.24
CCDC12-212ENST00000605358 CDC42BPBQ9Y5S2 1711 aa29.07■■■□□ 2.24
CCDC12-212ENST00000605358 PLPPR3Q6T4P5 718 aa29.05■■■□□ 2.24
CCDC12-212ENST00000605358 PREX2Q70Z35 1606 aa29.03■■■□□ 2.24
CCDC12-212ENST00000605358 MYT1LQ9UL68 1186 aa29.02■■■□□ 2.24
CCDC12-212ENST00000605358 SETD1BQ9UPS6 1966 aaKnown RBP29.02■■■□□ 2.24
CCDC12-212ENST00000605358 PREX1Q8TCU6 1659 aa29■■■□□ 2.23
CCDC12-212ENST00000605358 DIP2CQ9Y2E4 1556 aa29■■■□□ 2.23
CCDC12-212ENST00000605358 FYCO1Q9BQS8 1478 aa28.99■■■□□ 2.23
CCDC12-212ENST00000605358 ABCC1P33527 1531 aa28.99■■■□□ 2.23
CCDC12-212ENST00000605358 AGLP35573 1532 aa28.97■■■□□ 2.23
CCDC12-212ENST00000605358 TRAPPC8Q9Y2L5 1435 aa28.94■■■□□ 2.22
CCDC12-212ENST00000605358 ITSN2Q9NZM3 1697 aa28.93■■■□□ 2.22
CCDC12-212ENST00000605358 DMRT2Q9Y5R5 561 aa28.93■■■□□ 2.22
CCDC12-212ENST00000605358 CDC42BPAQ5VT25 1732 aa28.92■■■□□ 2.22
CCDC12-212ENST00000605358 ABCA6Q8N139 1617 aa28.92■■■□□ 2.22
CCDC12-212ENST00000605358 CEBPAP49715 358 aaPredicted RBP28.92■■■□□ 2.22
CCDC12-212ENST00000605358 UHRF1BP1Q6BDS2 1440 aa28.89■■■□□ 2.22
CCDC12-212ENST00000605358 ESF1Q9H501 851 aaKnown RBP28.89■■■□□ 2.22
CCDC12-212ENST00000605358 CERKQ8TCT0 537 aa28.88■■■□□ 2.21
CCDC12-212ENST00000605358 KIDINS220Q9ULH0 1771 aa28.87■■■□□ 2.21
CCDC12-212ENST00000605358 CNTLNQ9NXG0 1405 aa28.86■■■□□ 2.21
CCDC12-212ENST00000605358 GPATCH8Q9UKJ3 1502 aaKnown RBP28.83■■■□□ 2.21
CCDC12-212ENST00000605358 C3P01024 1663 aa28.81■■■□□ 2.2
CCDC12-212ENST00000605358 SAMD9LQ8IVG5 1584 aa28.81■■■□□ 2.2
CCDC12-212ENST00000605358 PLEKHH2Q8IVE3 1493 aa28.81■■■□□ 2.2
CCDC12-212ENST00000605358 KIAA1107Q9UPP5 1409 aa28.81■■■□□ 2.2
CCDC12-212ENST00000605358 ZNF777Q9ULD5 760 aaPredicted RBP28.79■■■□□ 2.2
CCDC12-212ENST00000605358 STRCQ7RTU9 1775 aa28.78■■■□□ 2.2
CCDC12-212ENST00000605358 SPAG9O60271 1321 aaKnown RBP28.77■■■□□ 2.2
CCDC12-212ENST00000605358 CFDP1Q9UEE9 299 aaPredicted RBP28.76■■■□□ 2.19
CCDC12-212ENST00000605358 SYCP2Q9BX26 1530 aa28.74■■■□□ 2.19
CCDC12-212ENST00000605358 CCNB3Q8WWL7 1395 aa28.74■■■□□ 2.19
CCDC12-212ENST00000605358 PTPRTO14522 1441 aa28.73■■■□□ 2.19
CCDC12-212ENST00000605358 HNRNPMP52272 730 aaKnown RBP eCLIP28.72■■■□□ 2.193e-6■■□□□ 12.2
CCDC12-212ENST00000605358 MROH2AA6NES4 1674 aa28.72■■■□□ 2.19
CCDC12-212ENST00000605358 MTUS2Q5JR59 1369 aa28.72■■■□□ 2.19
CCDC12-212ENST00000605358 NPATQ14207 1427 aa28.71■■■□□ 2.19
CCDC12-212ENST00000605358 ATP7AQ04656 1500 aa28.69■■■□□ 2.18
CCDC12-212ENST00000605358 PPP6R1Q9UPN7 881 aa28.67■■■□□ 2.18
CCDC12-212ENST00000605358 INO80Q9ULG1 1556 aaPredicted RBP28.66■■■□□ 2.18
CCDC12-212ENST00000605358 ZMYM3Q14202 1370 aa28.65■■■□□ 2.18
CCDC12-212ENST00000605358 PLXNC1O60486 1568 aa28.64■■■□□ 2.18
CCDC12-212ENST00000605358 A2MP01023 1474 aa28.64■■■□□ 2.17
CCDC12-212ENST00000605358 SUPT6HQ7KZ85 1726 aaKnown RBP28.63■■■□□ 2.17
CCDC12-212ENST00000605358 NCOA1Q15788 1441 aa28.6■■■□□ 2.17
CCDC12-212ENST00000605358 EHBP1L1Q8N3D4 1523 aa28.6■■■□□ 2.17
CCDC12-212ENST00000605358 RTEL1-TNFRSF6BF6WH68 1400 aa28.58■■■□□ 2.17
CCDC12-212ENST00000605358 CEP162Q5TB80 1403 aa28.58■■■□□ 2.17
CCDC12-212ENST00000605358 ADGBQ8N7X0 1667 aa28.58■■■□□ 2.16
CCDC12-212ENST00000605358 TIAM1Q13009 1591 aa28.55■■■□□ 2.16
CCDC12-212ENST00000605358 MBD5Q9P267 1494 aa28.54■■■□□ 2.16
CCDC12-212ENST00000605358 IQSEC2Q5JU85 1478 aa28.53■■■□□ 2.16
CCDC12-212ENST00000605358 CLTCQ00610 1675 aaKnown RBP28.53■■■□□ 2.16
CCDC12-212ENST00000605358 RSPH4AQ5TD94 716 aa28.52■■■□□ 2.16
CCDC12-212ENST00000605358 GGT6Q6P531 493 aa28.52■■■□□ 2.16
CCDC12-212ENST00000605358 CAMSAP1Q5T5Y3 1602 aa28.51■■■□□ 2.15
CCDC12-212ENST00000605358 PTPRKQ15262 1439 aa28.5■■■□□ 2.15
CCDC12-212ENST00000605358 ZNF644Q9H582 1327 aaPredicted RBP28.49■■■□□ 2.15
CCDC12-212ENST00000605358 PKD2Q13563 968 aa28.49■■■□□ 2.15
CCDC12-212ENST00000605358 LTBP4Q8N2S1 1624 aa28.49■■■□□ 2.15
CCDC12-212ENST00000605358 ZNF142P52746 1687 aaPredicted RBP28.48■■■□□ 2.15
CCDC12-212ENST00000605358 PLA2R1Q13018 1463 aa28.48■■■□□ 2.15
CCDC12-212ENST00000605358 DHX29Q7Z478 1369 aaKnown RBP28.48■■■□□ 2.15
CCDC12-212ENST00000605358 MYO3AQ8NEV4 1616 aa28.43■■■□□ 2.14
CCDC12-212ENST00000605358 FAM135AQ9P2D6 1515 aa28.43■■■□□ 2.14
CCDC12-212ENST00000605358 CEP170BQ9Y4F5 1589 aaPredicted RBP28.41■■■□□ 2.14
CCDC12-212ENST00000605358 CCDC141Q6ZP82 1450 aa28.4■■■□□ 2.14
CCDC12-212ENST00000605358 NCOA2Q15596 1464 aa28.4■■■□□ 2.14
CCDC12-212ENST00000605358 TCOF1Q13428 1488 aaKnown RBP28.39■■■□□ 2.13
CCDC12-212ENST00000605358 NCKAP5LQ9HCH0 1330 aa28.39■■■□□ 2.13
CCDC12-212ENST00000605358 A2ML1A8K2U0 1454 aa28.35■■■□□ 2.13
CCDC12-212ENST00000605358 CAMSAP2Q08AD1 1489 aa28.35■■■□□ 2.13
CCDC12-212ENST00000605358 KIF3BO15066 747 aa28.34■■■□□ 2.13
CCDC12-212ENST00000605358 ARHGEF5Q12774 1597 aa28.33■■■□□ 2.12
CCDC12-212ENST00000605358 TSPY4P0CV99 314 aa28.32■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms