RNA–Protein interactions for RNA: ENST00000604922.1

SH3D19-213, Transcript of SH3 domain containing 19, humanhuman

TSL 2

Gene SH3D19, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-213ENST00000604922 MARVELD3Q96A59 401 aa13.7□□□□□ -0.22
SH3D19-213ENST00000604922 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.7□□□□□ -0.22
SH3D19-213ENST00000604922 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.65□□□□□ -0.22
SH3D19-213ENST00000604922 MICALL2Q8IY33 904 aa13.64□□□□□ -0.23
SH3D19-213ENST00000604922 GTPBP6O43824 516 aaPredicted RBP13.59□□□□□ -0.23
SH3D19-213ENST00000604922 KRTAP3-3Q9BYR6 98 aa13.59□□□□□ -0.23
SH3D19-213ENST00000604922 KRTAP3-2Q9BYR7 98 aa13.59□□□□□ -0.23
SH3D19-213ENST00000604922 PPP1R37O75864 691 aa13.58□□□□□ -0.24
SH3D19-213ENST00000604922 POTEB3A0JP26 581 aa13.54□□□□□ -0.24
SH3D19-213ENST00000604922 POTEBQ6S5H4 581 aa13.54□□□□□ -0.24
SH3D19-213ENST00000604922 SPRYD3Q8NCJ5 442 aa13.53□□□□□ -0.24
SH3D19-213ENST00000604922 SNPHO15079 494 aa13.52□□□□□ -0.25
SH3D19-213ENST00000604922 PAXIP1Q6ZW49 1069 aaPredicted RBP13.48□□□□□ -0.25
SH3D19-213ENST00000604922 CFAP44Q96MT7 982 aa13.48□□□□□ -0.25
SH3D19-213ENST00000604922 TMC2Q8TDI7 906 aa13.44□□□□□ -0.26
SH3D19-213ENST00000604922 EMP3P54852 163 aa13.43□□□□□ -0.26
SH3D19-213ENST00000604922 TMEM92Q6UXU6 159 aa13.42□□□□□ -0.26
SH3D19-213ENST00000604922 HS3ST6Q96QI5 342 aa13.42□□□□□ -0.26
SH3D19-213ENST00000604922 C2orf72A6NCS6 295 aa13.37□□□□□ -0.27
SH3D19-213ENST00000604922 FAM205CA6NFA0 338 aa13.37□□□□□ -0.27
SH3D19-213ENST00000604922 KIF3CO14782 793 aa13.35□□□□□ -0.27
SH3D19-213ENST00000604922 GPHNQ9NQX3 736 aaPredicted RBP13.34□□□□□ -0.27
SH3D19-213ENST00000604922 PDE4AP27815 886 aa13.33□□□□□ -0.28
SH3D19-213ENST00000604922 DOK7Q18PE1 504 aa13.33□□□□□ -0.28
SH3D19-213ENST00000604922 RIMBP2O15034 1052 aa13.29□□□□□ -0.28
SH3D19-213ENST00000604922 ZNF710Q8N1W2 664 aa13.29□□□□□ -0.28
SH3D19-213ENST00000604922 CRISPLD2Q9H0B8 497 aa13.28□□□□□ -0.28
SH3D19-213ENST00000604922 FOXK1P85037 733 aa13.27□□□□□ -0.29
SH3D19-213ENST00000604922 HOXB3P14651 431 aaPredicted RBP13.26□□□□□ -0.29
SH3D19-213ENST00000604922 NCKAP5LQ9HCH0 1330 aa13.25□□□□□ -0.29
SH3D19-213ENST00000604922 PLCB2Q00722 1185 aa13.25□□□□□ -0.29
SH3D19-213ENST00000604922 CADPS2Q86UW7 1296 aa13.25□□□□□ -0.29
SH3D19-213ENST00000604922 LARP6Q9BRS8 491 aaKnown RBP13.25□□□□□ -0.29
SH3D19-213ENST00000604922 PLPP6Q8IY26 295 aa13.24□□□□□ -0.29
SH3D19-213ENST00000604922 DSG2Q14126 1118 aa13.23□□□□□ -0.29
SH3D19-213ENST00000604922 DDX27Q96GQ7 796 aaKnown RBP13.22□□□□□ -0.29
SH3D19-213ENST00000604922 ZSWIM6Q9HCJ5 1215 aa13.21□□□□□ -0.29
SH3D19-213ENST00000604922 PPP1R15BQ5SWA1 713 aa13.2□□□□□ -0.3
SH3D19-213ENST00000604922 RNF166Q96A37 237 aaPredicted RBP13.2□□□□□ -0.3
SH3D19-213ENST00000604922 SLC34A2O95436 690 aa13.17□□□□□ -0.3
SH3D19-213ENST00000604922 MFSD10Q14728 455 aa13.17□□□□□ -0.3
SH3D19-213ENST00000604922 HOXB1P14653 301 aaPredicted RBP13.15□□□□□ -0.3
SH3D19-213ENST00000604922 TSHZ2Q9NRE2 1034 aa13.15□□□□□ -0.3
SH3D19-213ENST00000604922 WDR70Q9NW82 654 aa13.14□□□□□ -0.31
SH3D19-213ENST00000604922 TBC1D12O60347 775 aa13.12□□□□□ -0.31
SH3D19-213ENST00000604922 ARSIQ5FYB1 569 aa13.11□□□□□ -0.31
SH3D19-213ENST00000604922 GPR153Q6NV75 609 aa13.1□□□□□ -0.31
SH3D19-213ENST00000604922 PTCD2Q8WV60 388 aaKnown RBP13.1□□□□□ -0.31
SH3D19-213ENST00000604922 PCDHGA4Q9Y5G9 962 aa13.1□□□□□ -0.31
SH3D19-213ENST00000604922 HAP1P54257 671 aaPredicted RBP13.08□□□□□ -0.32
SH3D19-213ENST00000604922 MYT1LQ9UL68 1186 aa13.06□□□□□ -0.32
SH3D19-213ENST00000604922 UPF1Q92900 1129 aaKnown RBP eCLIP13.05□□□□□ -0.32
SH3D19-213ENST00000604922 OXER1Q8TDS5 423 aa13.04□□□□□ -0.32
SH3D19-213ENST00000604922 KHSRPQ92945 711 aaKnown RBP eCLIP13.03□□□□□ -0.32
SH3D19-213ENST00000604922 ERBB3P21860 1342 aa13.03□□□□□ -0.32
SH3D19-213ENST00000604922 NUDT7P0C024 238 aa13.02□□□□□ -0.33
SH3D19-213ENST00000604922 MAP3K9P80192 1104 aa13.01□□□□□ -0.33
SH3D19-213ENST00000604922 CAMK2BQ13554 666 aa13□□□□□ -0.33
SH3D19-213ENST00000604922 E2F4Q16254 413 aa12.99□□□□□ -0.33
SH3D19-213ENST00000604922 ZNF316A6NFI3 1004 aaPredicted RBP12.97□□□□□ -0.33
SH3D19-213ENST00000604922 EMILIN3Q9NT22 766 aa12.97□□□□□ -0.33
SH3D19-213ENST00000604922 VARS2Q5ST30 1063 aaKnown RBP12.93□□□□□ -0.34
SH3D19-213ENST00000604922 EVI5O60447 810 aa12.92□□□□□ -0.34
SH3D19-213ENST00000604922 LHX6Q9UPM6 363 aa12.92□□□□□ -0.34
SH3D19-213ENST00000604922 KDM4FA0A1W2PPD8 638 aa12.91□□□□□ -0.34
SH3D19-213ENST00000604922 PSDA5PKW4 1024 aaPredicted RBP12.91□□□□□ -0.34
SH3D19-213ENST00000604922 DPYSL4O14531 572 aa12.89□□□□□ -0.35
SH3D19-213ENST00000604922 VSIG10Q8N0Z9 540 aa12.87□□□□□ -0.35
SH3D19-213ENST00000604922 ANO8Q9HCE9 1232 aaPredicted RBP12.86□□□□□ -0.35
SH3D19-213ENST00000604922 P3H3Q8IVL6 736 aa12.85□□□□□ -0.35
SH3D19-213ENST00000604922 ZNF687Q8N1G0 1237 aa12.84□□□□□ -0.35
SH3D19-213ENST00000604922 ARIH1Q9Y4X5 557 aaPredicted RBP12.84□□□□□ -0.35
SH3D19-213ENST00000604922 PPP4R3BQ5MIZ7 849 aa12.83□□□□□ -0.36
SH3D19-213ENST00000604922 SPDYE16A6NNV3 312 aaPredicted RBP12.82□□□□□ -0.36
SH3D19-213ENST00000604922 ARHGEF1Q92888 912 aaKnown RBP12.81□□□□□ -0.36
SH3D19-213ENST00000604922 ZNF454Q8N9F8 522 aa12.8□□□□□ -0.36
SH3D19-213ENST00000604922 KDM2AQ9Y2K7 1162 aa12.8□□□□□ -0.36
SH3D19-213ENST00000604922 PDIA6Q15084 440 aa12.79□□□□□ -0.36
SH3D19-213ENST00000604922 KCNV2Q8TDN2 545 aa12.79□□□□□ -0.36
SH3D19-213ENST00000604922 JPH4Q96JJ6 628 aa12.77□□□□□ -0.37
SH3D19-213ENST00000604922 FOSBP53539 338 aa12.76□□□□□ -0.37
SH3D19-213ENST00000604922 PTGER2P43116 358 aa12.75□□□□□ -0.37
SH3D19-213ENST00000604922 PBX2P40425 430 aa12.74□□□□□ -0.37
SH3D19-213ENST00000604922 KCNH8Q96L42 1107 aa12.74□□□□□ -0.37
SH3D19-213ENST00000604922 PHF14O94880 888 aa12.73□□□□□ -0.37
SH3D19-213ENST00000604922 ZDHHC16Q969W1 377 aa12.73□□□□□ -0.37
SH3D19-213ENST00000604922 DDX12PQ92771 950 aa12.71□□□□□ -0.37
SH3D19-213ENST00000604922 FBXW7Q969H0 707 aa12.71□□□□□ -0.37
SH3D19-213ENST00000604922 EPAS1Q99814 870 aa12.71□□□□□ -0.37
SH3D19-213ENST00000604922 ARHGAP33O14559 1287 aa12.7□□□□□ -0.38
SH3D19-213ENST00000604922 PLA2G2EQ9NZK7 142 aa12.7□□□□□ -0.38
SH3D19-213ENST00000604922 PCDHGA10Q9Y5H3 936 aa12.7□□□□□ -0.38
SH3D19-213ENST00000604922 TYW1BQ6NUM6 668 aa12.69□□□□□ -0.38
SH3D19-213ENST00000604922 BCL2L12Q9HB09 334 aa12.68□□□□□ -0.38
SH3D19-213ENST00000604922 AXIN2Q9Y2T1 843 aa12.68□□□□□ -0.38
SH3D19-213ENST00000604922 GRXCR2A6NFK2 248 aa12.67□□□□□ -0.38
SH3D19-213ENST00000604922 ANKRD13DQ6ZTN6 518 aa12.67□□□□□ -0.38
SH3D19-213ENST00000604922 PTPREP23469 700 aa12.66□□□□□ -0.38
SH3D19-213ENST00000604922 NBR1Q14596 966 aa12.65□□□□□ -0.38
SH3D19-213ENST00000604922 KCNK17Q96T54 332 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms