RNA–Protein interactions for RNA: ENST00000603907.1

GRAMD1A-214, Transcript of GRAM domain containing 1A, humanhuman

TSL 2

Gene GRAMD1A, Length 450 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-214ENST00000603907 FANCAO15360 1455 aa32.91■■■□□ 2.86
GRAMD1A-214ENST00000603907 LRRIQ1Q96JM4 1722 aa32.91■■■□□ 2.86
GRAMD1A-214ENST00000603907 LMTK3Q96Q04 1460 aa32.89■■■□□ 2.86
GRAMD1A-214ENST00000603907 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.87■■■□□ 2.85
GRAMD1A-214ENST00000603907 POGZQ7Z3K3 1410 aa32.85■■■□□ 2.85
GRAMD1A-214ENST00000603907 ZMYM4Q5VZL5 1548 aa32.83■■■□□ 2.85
GRAMD1A-214ENST00000603907 TTC37Q6PGP7 1564 aa32.83■■■□□ 2.85
GRAMD1A-214ENST00000603907 TROQ12816 1431 aaPredicted RBP32.8■■■□□ 2.84
GRAMD1A-214ENST00000603907 ZFYVE16Q7Z3T8 1539 aa32.8■■■□□ 2.84
GRAMD1A-214ENST00000603907 MAP3K1Q13233 1512 aa32.78■■■□□ 2.84
GRAMD1A-214ENST00000603907 MAGI2Q86UL8 1455 aa32.77■■■□□ 2.84
GRAMD1A-214ENST00000603907 TIAM1Q13009 1591 aa32.73■■■□□ 2.83
GRAMD1A-214ENST00000603907 YEATS2Q9ULM3 1422 aa32.72■■■□□ 2.83
GRAMD1A-214ENST00000603907 PLPPR3Q6T4P5 718 aa32.71■■■□□ 2.83
GRAMD1A-214ENST00000603907 APLP2Q06481 763 aa32.7■■■□□ 2.83
GRAMD1A-214ENST00000603907 SIGLEC1Q9BZZ2 1709 aa32.7■■■□□ 2.83
GRAMD1A-214ENST00000603907 MTUS2Q5JR59 1369 aa32.69■■■□□ 2.82
GRAMD1A-214ENST00000603907 FER1L4A9Z1Z3 1794 aa32.68■■■□□ 2.82
GRAMD1A-214ENST00000603907 KIF14Q15058 1648 aa32.67■■■□□ 2.82
GRAMD1A-214ENST00000603907 HSPA2P54652 639 aa32.67■■■□□ 2.82
GRAMD1A-214ENST00000603907 PLCH2O75038 1416 aa32.67■■■□□ 2.82
GRAMD1A-214ENST00000603907 SCAPERQ9BY12 1400 aa32.67■■■□□ 2.82
GRAMD1A-214ENST00000603907 EHBP1L1Q8N3D4 1523 aa32.65■■■□□ 2.82
GRAMD1A-214ENST00000603907 MLECQ14165 292 aa32.64■■■□□ 2.82
GRAMD1A-214ENST00000603907 MYO5CQ9NQX4 1742 aa32.6■■■□□ 2.81
GRAMD1A-214ENST00000603907 LRRC9Q6ZRR7 1453 aa32.6■■■□□ 2.81
GRAMD1A-214ENST00000603907 ATP10AO60312 1499 aa32.57■■■□□ 2.8
GRAMD1A-214ENST00000603907 EFCAB2Q5VUJ9 269 aa32.56■■■□□ 2.8
GRAMD1A-214ENST00000603907 C9orf84Q5VXU9 1444 aa32.55■■■□□ 2.8
GRAMD1A-214ENST00000603907 ARHGEF12Q9NZN5 1544 aa32.54■■■□□ 2.8
GRAMD1A-214ENST00000603907 PREX1Q8TCU6 1659 aa32.5■■■□□ 2.79
GRAMD1A-214ENST00000603907 KANK4Q5T7N3 995 aaPredicted RBP32.49■■■□□ 2.79
GRAMD1A-214ENST00000603907 CERKQ8TCT0 537 aa32.49■■■□□ 2.79
GRAMD1A-214ENST00000603907 SUPT6HQ7KZ85 1726 aaKnown RBP32.48■■■□□ 2.79
GRAMD1A-214ENST00000603907 ZNF518AQ6AHZ1 1483 aa32.47■■■□□ 2.79
GRAMD1A-214ENST00000603907 ARHGAP5Q13017 1502 aa32.43■■■□□ 2.78
GRAMD1A-214ENST00000603907 NCOA2Q15596 1464 aa32.42■■■□□ 2.78
GRAMD1A-214ENST00000603907 CCNB3Q8WWL7 1395 aa32.42■■■□□ 2.78
GRAMD1A-214ENST00000603907 KDM5CP41229 1560 aa32.4■■■□□ 2.78
GRAMD1A-214ENST00000603907 GPATCH8Q9UKJ3 1502 aaKnown RBP32.39■■■□□ 2.78
GRAMD1A-214ENST00000603907 PREX2Q70Z35 1606 aa32.38■■■□□ 2.77
GRAMD1A-214ENST00000603907 MYT1LQ9UL68 1186 aa32.38■■■□□ 2.77
GRAMD1A-214ENST00000603907 CEBPAP49715 358 aaPredicted RBP32.37■■■□□ 2.77
GRAMD1A-214ENST00000603907 CDC42BPAQ5VT25 1732 aa32.35■■■□□ 2.77
GRAMD1A-214ENST00000603907 AFAP1Q8N556 730 aa32.34■■■□□ 2.77
GRAMD1A-214ENST00000603907 DMRT2Q9Y5R5 561 aa32.34■■■□□ 2.77
GRAMD1A-214ENST00000603907 SETD1BQ9UPS6 1966 aaKnown RBP32.33■■■□□ 2.77
GRAMD1A-214ENST00000603907 UHRF1BP1Q6BDS2 1440 aa32.33■■■□□ 2.77
GRAMD1A-214ENST00000603907 DIP2CQ9Y2E4 1556 aa32.32■■■□□ 2.77
GRAMD1A-214ENST00000603907 CDC42BPBQ9Y5S2 1711 aa32.32■■■□□ 2.76
GRAMD1A-214ENST00000603907 ITSN2Q9NZM3 1697 aa32.32■■■□□ 2.76
GRAMD1A-214ENST00000603907 REREQ9P2R6 1566 aa32.32■■■□□ 2.76
GRAMD1A-214ENST00000603907 CFDP1Q9UEE9 299 aaPredicted RBP32.29■■■□□ 2.76
GRAMD1A-214ENST00000603907 STRCQ7RTU9 1775 aa32.29■■■□□ 2.76
GRAMD1A-214ENST00000603907 MLH3Q9UHC1 1453 aa32.26■■■□□ 2.75
GRAMD1A-214ENST00000603907 ABCA6Q8N139 1617 aa32.26■■■□□ 2.75
GRAMD1A-214ENST00000603907 ESF1Q9H501 851 aaKnown RBP32.23■■■□□ 2.75
GRAMD1A-214ENST00000603907 MYOM3Q5VTT5 1437 aa32.23■■■□□ 2.75
GRAMD1A-214ENST00000603907 C3P01024 1663 aa32.22■■■□□ 2.75
GRAMD1A-214ENST00000603907 MIA2Q96PC5 1412 aa32.21■■■□□ 2.75
GRAMD1A-214ENST00000603907 ABCC1P33527 1531 aa32.21■■■□□ 2.75
GRAMD1A-214ENST00000603907 AGLP35573 1532 aa32.21■■■□□ 2.75
GRAMD1A-214ENST00000603907 PLEKHH2Q8IVE3 1493 aa32.2■■■□□ 2.75
GRAMD1A-214ENST00000603907 TRAPPC8Q9Y2L5 1435 aa32.17■■■□□ 2.74
GRAMD1A-214ENST00000603907 ZNF777Q9ULD5 760 aaPredicted RBP32.16■■■□□ 2.74
GRAMD1A-214ENST00000603907 KIAA1107Q9UPP5 1409 aa32.16■■■□□ 2.74
GRAMD1A-214ENST00000603907 SAMD9LQ8IVG5 1584 aa32.15■■■□□ 2.74
GRAMD1A-214ENST00000603907 PTPRTO14522 1441 aa32.14■■■□□ 2.74
GRAMD1A-214ENST00000603907 KIDINS220Q9ULH0 1771 aa32.12■■■□□ 2.73
GRAMD1A-214ENST00000603907 CNTLNQ9NXG0 1405 aa32.1■■■□□ 2.73
GRAMD1A-214ENST00000603907 FGD6Q6ZV73 1430 aa32.09■■■□□ 2.73
GRAMD1A-214ENST00000603907 PPARGC1BQ86YN6 1023 aaKnown RBP32.08■■■□□ 2.73
GRAMD1A-214ENST00000603907 CAMSAP2Q08AD1 1489 aa32.07■■■□□ 2.72
GRAMD1A-214ENST00000603907 ZNF644Q9H582 1327 aaPredicted RBP32.05■■■□□ 2.72
GRAMD1A-214ENST00000603907 DISP3Q9P2K9 1392 aa32.05■■■□□ 2.72
GRAMD1A-214ENST00000603907 SYCP2Q9BX26 1530 aa32.05■■■□□ 2.72
GRAMD1A-214ENST00000603907 RSPH4AQ5TD94 716 aa32.03■■■□□ 2.72
GRAMD1A-214ENST00000603907 MROH2AA6NES4 1674 aa32.02■■■□□ 2.72
GRAMD1A-214ENST00000603907 TCOF1Q13428 1488 aaKnown RBP32.01■■■□□ 2.71
GRAMD1A-214ENST00000603907 PTPN23Q9H3S7 1636 aa32■■■□□ 2.71
GRAMD1A-214ENST00000603907 MBD5Q9P267 1494 aa32■■■□□ 2.71
GRAMD1A-214ENST00000603907 HNRNPMP52272 730 aaKnown RBP eCLIP32■■■□□ 2.71
GRAMD1A-214ENST00000603907 NCOA1Q15788 1441 aa31.99■■■□□ 2.71
GRAMD1A-214ENST00000603907 NPATQ14207 1427 aa31.97■■■□□ 2.71
GRAMD1A-214ENST00000603907 ARHGEF5Q12774 1597 aa31.96■■■□□ 2.71
GRAMD1A-214ENST00000603907 LTBP4Q8N2S1 1624 aa31.96■■■□□ 2.71
GRAMD1A-214ENST00000603907 IQSEC2Q5JU85 1478 aa31.95■■■□□ 2.7
GRAMD1A-214ENST00000603907 CCDC141Q6ZP82 1450 aa31.94■■■□□ 2.7
GRAMD1A-214ENST00000603907 SPAG9O60271 1321 aaKnown RBP31.94■■■□□ 2.7
GRAMD1A-214ENST00000603907 CAMSAP1Q5T5Y3 1602 aa31.92■■■□□ 2.7
GRAMD1A-214ENST00000603907 ZMYM3Q14202 1370 aa31.9■■■□□ 2.7
GRAMD1A-214ENST00000603907 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.9■■■□□ 2.7
GRAMD1A-214ENST00000603907 ILDR2Q71H61 639 aa31.89■■■□□ 2.7
GRAMD1A-214ENST00000603907 ATP7AQ04656 1500 aa31.89■■■□□ 2.7
GRAMD1A-214ENST00000603907 SPATA31D1Q6ZQQ2 1576 aa31.87■■■□□ 2.69
GRAMD1A-214ENST00000603907 RRBP1Q9P2E9 1410 aaKnown RBP31.87■■■□□ 2.69
GRAMD1A-214ENST00000603907 CLTCQ00610 1675 aaKnown RBP31.86■■■□□ 2.69
GRAMD1A-214ENST00000603907 TSPY4P0CV99 314 aa31.85■■■□□ 2.69
GRAMD1A-214ENST00000603907 TSPY10P0CW01 314 aa31.85■■■□□ 2.69
GRAMD1A-214ENST00000603907 RTEL1-TNFRSF6BF6WH68 1400 aa31.84■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms