RNA–Protein interactions for RNA: ENST00000602959.5

UBE2E3-213, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBE2E3, Length 909 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-213ENST00000602959 CDC42BPAQ5VT25 1732 aa38.6■■■■□ 3.77
UBE2E3-213ENST00000602959 EHBP1L1Q8N3D4 1523 aa38.58■■■■□ 3.77
UBE2E3-213ENST00000602959 MTUS2Q5JR59 1369 aa38.57■■■■□ 3.77
UBE2E3-213ENST00000602959 ZMYM4Q5VZL5 1548 aa38.56■■■■□ 3.76
UBE2E3-213ENST00000602959 SCAPERQ9BY12 1400 aa38.55■■■■□ 3.76
UBE2E3-213ENST00000602959 POGZQ7Z3K3 1410 aa38.54■■■■□ 3.76
UBE2E3-213ENST00000602959 TIAM1Q13009 1591 aa38.53■■■■□ 3.76
UBE2E3-213ENST00000602959 ARHGEF40Q8TER5 1519 aa38.5■■■■□ 3.75
UBE2E3-213ENST00000602959 KDM4FA0A1W2PPD8 638 aa38.5■■■■□ 3.75
UBE2E3-213ENST00000602959 AEBP2Q6ZN18 517 aaPredicted RBP38.5■■■■□ 3.75
UBE2E3-213ENST00000602959 GPATCH8Q9UKJ3 1502 aaKnown RBP38.47■■■■□ 3.75
UBE2E3-213ENST00000602959 ABCC1P33527 1531 aa38.44■■■■□ 3.74
UBE2E3-213ENST00000602959 MAGI2Q86UL8 1455 aa38.43■■■■□ 3.74
UBE2E3-213ENST00000602959 MAP3K1Q13233 1512 aa38.41■■■■□ 3.74
UBE2E3-213ENST00000602959 ZNF518AQ6AHZ1 1483 aa38.41■■■■□ 3.74
UBE2E3-213ENST00000602959 ITSN2Q9NZM3 1697 aa38.39■■■■□ 3.74
UBE2E3-213ENST00000602959 ZFYVE16Q7Z3T8 1539 aa38.39■■■■□ 3.74
UBE2E3-213ENST00000602959 CCNB3Q8WWL7 1395 aa38.39■■■■□ 3.74
UBE2E3-213ENST00000602959 KDM5CP41229 1560 aa38.39■■■■□ 3.74
UBE2E3-213ENST00000602959 SUPT6HQ7KZ85 1726 aaKnown RBP38.38■■■■□ 3.74
UBE2E3-213ENST00000602959 SAMD9LQ8IVG5 1584 aa38.36■■■■□ 3.73
UBE2E3-213ENST00000602959 ARHGEF12Q9NZN5 1544 aa38.34■■■■□ 3.73
UBE2E3-213ENST00000602959 YEATS2Q9ULM3 1422 aa38.33■■■■□ 3.73
UBE2E3-213ENST00000602959 LRRC9Q6ZRR7 1453 aa38.33■■■■□ 3.73
UBE2E3-213ENST00000602959 NCOA2Q15596 1464 aa38.3■■■■□ 3.72
UBE2E3-213ENST00000602959 HECW2Q9P2P5 1572 aa38.28■■■■□ 3.72
UBE2E3-213ENST00000602959 CFDP1Q9UEE9 299 aaPredicted RBP38.27■■■■□ 3.72
UBE2E3-213ENST00000602959 TRAPPC8Q9Y2L5 1435 aa38.27■■■■□ 3.72
UBE2E3-213ENST00000602959 AFAP1Q8N556 730 aa38.26■■■■□ 3.72
UBE2E3-213ENST00000602959 PLEKHH2Q8IVE3 1493 aa38.25■■■■□ 3.71
UBE2E3-213ENST00000602959 SYCP2Q9BX26 1530 aa38.25■■■■□ 3.71
UBE2E3-213ENST00000602959 ZNF777Q9ULD5 760 aaPredicted RBP38.23■■■■□ 3.71
UBE2E3-213ENST00000602959 KIAA1107Q9UPP5 1409 aa38.22■■■■□ 3.71
UBE2E3-213ENST00000602959 MLH3Q9UHC1 1453 aa38.22■■■■□ 3.71
UBE2E3-213ENST00000602959 BCORL1Q5H9F3 1711 aa38.21■■■■□ 3.71
UBE2E3-213ENST00000602959 SIGLEC1Q9BZZ2 1709 aa38.21■■■■□ 3.71
UBE2E3-213ENST00000602959 ADAMTSL3P82987 1691 aa38.2■■■■□ 3.71
UBE2E3-213ENST00000602959 ATP10AO60312 1499 aa38.18■■■■□ 3.7
UBE2E3-213ENST00000602959 DIP2CQ9Y2E4 1556 aa38.15■■■■□ 3.7
UBE2E3-213ENST00000602959 KANK4Q5T7N3 995 aaPredicted RBP38.15■■■■□ 3.7
UBE2E3-213ENST00000602959 C9orf84Q5VXU9 1444 aa38.14■■■■□ 3.7
UBE2E3-213ENST00000602959 ABCA6Q8N139 1617 aa38.13■■■■□ 3.69
UBE2E3-213ENST00000602959 KIDINS220Q9ULH0 1771 aa38.13■■■■□ 3.69
UBE2E3-213ENST00000602959 ARID4BQ4LE39 1312 aaPredicted RBP38.12■■■■□ 3.69
UBE2E3-213ENST00000602959 REREQ9P2R6 1566 aa38.1■■■■□ 3.69
UBE2E3-213ENST00000602959 HNRNPMP52272 730 aaKnown RBP eCLIP38.09■■■■□ 3.697e-8■■■■□ 26.6
UBE2E3-213ENST00000602959 APLP2Q06481 763 aa38.08■■■■□ 3.69
UBE2E3-213ENST00000602959 ZNF644Q9H582 1327 aaPredicted RBP38.06■■■■□ 3.68
UBE2E3-213ENST00000602959 MADDQ8WXG6 1647 aa38.05■■■■□ 3.68
UBE2E3-213ENST00000602959 MBD5Q9P267 1494 aa38.05■■■■□ 3.68
UBE2E3-213ENST00000602959 CAMSAP2Q08AD1 1489 aa38.04■■■■□ 3.68
UBE2E3-213ENST00000602959 MYT1LQ9UL68 1186 aa38.04■■■■□ 3.68
UBE2E3-213ENST00000602959 INO80Q9ULG1 1556 aaPredicted RBP38.04■■■■□ 3.68
UBE2E3-213ENST00000602959 ATP7AQ04656 1500 aa38.01■■■■□ 3.67
UBE2E3-213ENST00000602959 SPAG9O60271 1321 aaKnown RBP37.99■■■■□ 3.67
UBE2E3-213ENST00000602959 MYOM3Q5VTT5 1437 aa37.97■■■■□ 3.67
UBE2E3-213ENST00000602959 PTPRMP28827 1452 aa37.95■■■■□ 3.67
UBE2E3-213ENST00000602959 AGLP35573 1532 aa37.94■■■■□ 3.66
UBE2E3-213ENST00000602959 MIA2Q96PC5 1412 aa37.94■■■■□ 3.66
UBE2E3-213ENST00000602959 RIMS1Q86UR5 1692 aaKnown RBP37.93■■■■□ 3.66
UBE2E3-213ENST00000602959 ARHGEF5Q12774 1597 aa37.93■■■■□ 3.66
UBE2E3-213ENST00000602959 CCDC141Q6ZP82 1450 aa37.92■■■■□ 3.66
UBE2E3-213ENST00000602959 FER1L4A9Z1Z3 1794 aa37.91■■■■□ 3.66
UBE2E3-213ENST00000602959 RTEL1-TNFRSF6BF6WH68 1400 aa37.87■■■■□ 3.65
UBE2E3-213ENST00000602959 MLECQ14165 292 aa37.85■■■■□ 3.65
UBE2E3-213ENST00000602959 RSPH4AQ5TD94 716 aa37.85■■■■□ 3.65
UBE2E3-213ENST00000602959 ADGBQ8N7X0 1667 aa37.85■■■■□ 3.65
UBE2E3-213ENST00000602959 PLXNC1O60486 1568 aa37.85■■■■□ 3.65
UBE2E3-213ENST00000602959 A2MP01023 1474 aa37.79■■■■□ 3.64
UBE2E3-213ENST00000602959 PTPN23Q9H3S7 1636 aa37.76■■■■□ 3.64
UBE2E3-213ENST00000602959 FGD6Q6ZV73 1430 aa37.74■■■■□ 3.63
UBE2E3-213ENST00000602959 MAST1Q9Y2H9 1570 aa37.73■■■■□ 3.63
UBE2E3-213ENST00000602959 TCOF1Q13428 1488 aaKnown RBP37.7■■■■□ 3.63
UBE2E3-213ENST00000602959 TSPY4P0CV99 314 aa37.66■■■■□ 3.62
UBE2E3-213ENST00000602959 TSPY10P0CW01 314 aa37.66■■■■□ 3.62
UBE2E3-213ENST00000602959 CROCC2H7BZ55 1655 aa37.64■■■■□ 3.62
UBE2E3-213ENST00000602959 DHX29Q7Z478 1369 aaKnown RBP37.63■■■■□ 3.61
UBE2E3-213ENST00000602959 DNMT1P26358 1616 aaKnown RBP37.6■■■■□ 3.61
UBE2E3-213ENST00000602959 SHANK2Q9UPX8 1470 aa37.59■■■■□ 3.61
UBE2E3-213ENST00000602959 CNTLNQ9NXG0 1405 aa37.59■■■■□ 3.61
UBE2E3-213ENST00000602959 ABCC5O15440 1437 aa37.56■■■■□ 3.6
UBE2E3-213ENST00000602959 MROH2AA6NES4 1674 aa37.56■■■■□ 3.6
UBE2E3-213ENST00000602959 C3P01024 1663 aa37.56■■■■□ 3.6
UBE2E3-213ENST00000602959 DAPK1P53355 1430 aa37.53■■■■□ 3.6
UBE2E3-213ENST00000602959 ESF1Q9H501 851 aaKnown RBP37.52■■■■□ 3.6
UBE2E3-213ENST00000602959 PLPPR3Q6T4P5 718 aa37.5■■■■□ 3.59
UBE2E3-213ENST00000602959 LMTK3Q96Q04 1460 aa37.5■■■■□ 3.59
UBE2E3-213ENST00000602959 CLTCQ00610 1675 aaKnown RBP37.49■■■■□ 3.59
UBE2E3-213ENST00000602959 CEBPAP49715 358 aaPredicted RBP37.47■■■■□ 3.59
UBE2E3-213ENST00000602959 PREX1Q8TCU6 1659 aa37.45■■■■□ 3.59
UBE2E3-213ENST00000602959 GGT6Q6P531 493 aa37.45■■■■□ 3.59
UBE2E3-213ENST00000602959 PPP6R1Q9UPN7 881 aa37.45■■■■□ 3.59
UBE2E3-213ENST00000602959 EIF2AK4Q9P2K8 1649 aaKnown RBP37.45■■■■□ 3.59
UBE2E3-213ENST00000602959 FAM135AQ9P2D6 1515 aa37.43■■■■□ 3.58
UBE2E3-213ENST00000602959 DUOX2Q9NRD8 1548 aa37.42■■■■□ 3.58
UBE2E3-213ENST00000602959 KIF3BO15066 747 aa37.42■■■■□ 3.58
UBE2E3-213ENST00000602959 SETD1BQ9UPS6 1966 aaKnown RBP37.42■■■■□ 3.58
UBE2E3-213ENST00000602959 RNF17Q9BXT8 1623 aaKnown RBP37.41■■■■□ 3.58
UBE2E3-213ENST00000602959 ZMYM3Q14202 1370 aa37.37■■■■□ 3.57
UBE2E3-213ENST00000602959 KIF15Q9NS87 1388 aa37.37■■■■□ 3.57
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms