RNA–Protein interactions for RNA: ENST00000601809.5

IRF3-230, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-230ENST00000601809 VPS8Q8N3P4 1428 aa28.07■■■□□ 2.08
IRF3-230ENST00000601809 ARHGAP5Q13017 1502 aa28.04■■■□□ 2.08
IRF3-230ENST00000601809 POGZQ7Z3K3 1410 aa28.04■■■□□ 2.08
IRF3-230ENST00000601809 SCAPERQ9BY12 1400 aa28.04■■■□□ 2.08
IRF3-230ENST00000601809 EFCAB2Q5VUJ9 269 aa28.04■■■□□ 2.08
IRF3-230ENST00000601809 ARHGEF40Q8TER5 1519 aa28.02■■■□□ 2.08
IRF3-230ENST00000601809 EHBP1L1Q8N3D4 1523 aa28.01■■■□□ 2.07
IRF3-230ENST00000601809 GPATCH8Q9UKJ3 1502 aaKnown RBP28■■■□□ 2.07
IRF3-230ENST00000601809 TIAM1Q13009 1591 aa27.99■■■□□ 2.07
IRF3-230ENST00000601809 AEBP2Q6ZN18 517 aaPredicted RBP27.98■■■□□ 2.07
IRF3-230ENST00000601809 ABCC1P33527 1531 aa27.97■■■□□ 2.07
IRF3-230ENST00000601809 MTUS2Q5JR59 1369 aa27.97■■■□□ 2.07
IRF3-230ENST00000601809 MAGI2Q86UL8 1455 aa27.96■■■□□ 2.07
IRF3-230ENST00000601809 KDM5CP41229 1560 aa27.96■■■□□ 2.07
IRF3-230ENST00000601809 ARHGEF12Q9NZN5 1544 aa27.96■■■□□ 2.07
IRF3-230ENST00000601809 YEATS2Q9ULM3 1422 aa27.93■■■□□ 2.06
IRF3-230ENST00000601809 ITSN2Q9NZM3 1697 aa27.93■■■□□ 2.06
IRF3-230ENST00000601809 SIGLEC1Q9BZZ2 1709 aa27.92■■■□□ 2.06
IRF3-230ENST00000601809 SAMD9LQ8IVG5 1584 aa27.92■■■□□ 2.06
IRF3-230ENST00000601809 ZFYVE16Q7Z3T8 1539 aa27.92■■■□□ 2.06
IRF3-230ENST00000601809 ZNF518AQ6AHZ1 1483 aa27.91■■■□□ 2.06
IRF3-230ENST00000601809 MAP3K1Q13233 1512 aa27.91■■■□□ 2.06
IRF3-230ENST00000601809 TRAPPC8Q9Y2L5 1435 aa27.87■■■□□ 2.05
IRF3-230ENST00000601809 ADAMTSL3P82987 1691 aa27.87■■■□□ 2.05
IRF3-230ENST00000601809 LRRC9Q6ZRR7 1453 aa27.85■■■□□ 2.05
IRF3-230ENST00000601809 BCORL1Q5H9F3 1711 aa27.85■■■□□ 2.05
IRF3-230ENST00000601809 CCNB3Q8WWL7 1395 aa27.85■■■□□ 2.05
IRF3-230ENST00000601809 SUPT6HQ7KZ85 1726 aaKnown RBP27.84■■■□□ 2.05
IRF3-230ENST00000601809 AFAP1Q8N556 730 aa27.84■■■□□ 2.05
IRF3-230ENST00000601809 HECW2Q9P2P5 1572 aa27.83■■■□□ 2.05
IRF3-230ENST00000601809 NCOA2Q15596 1464 aa27.83■■■□□ 2.04
IRF3-230ENST00000601809 MLH3Q9UHC1 1453 aa27.83■■■□□ 2.04
IRF3-230ENST00000601809 SYCP2Q9BX26 1530 aa27.81■■■□□ 2.04
IRF3-230ENST00000601809 KIAA1107Q9UPP5 1409 aa27.8■■■□□ 2.04
IRF3-230ENST00000601809 DIP2CQ9Y2E4 1556 aa27.79■■■□□ 2.04
IRF3-230ENST00000601809 ATP10AO60312 1499 aa27.78■■■□□ 2.04
IRF3-230ENST00000601809 KIDINS220Q9ULH0 1771 aa27.78■■■□□ 2.04
IRF3-230ENST00000601809 CFDP1Q9UEE9 299 aaPredicted RBP27.77■■■□□ 2.04
IRF3-230ENST00000601809 ABCA6Q8N139 1617 aa27.77■■■□□ 2.04
IRF3-230ENST00000601809 PLEKHH2Q8IVE3 1493 aa27.76■■■□□ 2.03
IRF3-230ENST00000601809 REREQ9P2R6 1566 aa27.75■■■□□ 2.03
IRF3-230ENST00000601809 KANK4Q5T7N3 995 aaPredicted RBP27.75■■■□□ 2.03
IRF3-230ENST00000601809 C9orf84Q5VXU9 1444 aa27.75■■■□□ 2.03
IRF3-230ENST00000601809 MBD5Q9P267 1494 aa27.72■■■□□ 2.03
IRF3-230ENST00000601809 MADDQ8WXG6 1647 aa27.72■■■□□ 2.03
IRF3-230ENST00000601809 ZNF777Q9ULD5 760 aaPredicted RBP27.72■■■□□ 2.03
IRF3-230ENST00000601809 ZNF644Q9H582 1327 aaPredicted RBP27.7■■■□□ 2.03
IRF3-230ENST00000601809 HNRNPMP52272 730 aaKnown RBP eCLIP27.69■■■□□ 2.02
IRF3-230ENST00000601809 INO80Q9ULG1 1556 aaPredicted RBP27.69■■■□□ 2.02
IRF3-230ENST00000601809 PTPRMP28827 1452 aa27.66■■■□□ 2.02
IRF3-230ENST00000601809 ARID4BQ4LE39 1312 aaPredicted RBP27.66■■■□□ 2.02
IRF3-230ENST00000601809 CAMSAP2Q08AD1 1489 aa27.64■■■□□ 2.02
IRF3-230ENST00000601809 AGLP35573 1532 aa27.63■■■□□ 2.01
IRF3-230ENST00000601809 ATP7AQ04656 1500 aa27.63■■■□□ 2.01
IRF3-230ENST00000601809 RIMS1Q86UR5 1692 aaKnown RBP27.62■■■□□ 2.01
IRF3-230ENST00000601809 SPAG9O60271 1321 aaKnown RBP27.59■■■□□ 2.01
IRF3-230ENST00000601809 FER1L4A9Z1Z3 1794 aa27.58■■■□□ 2
IRF3-230ENST00000601809 MYOM3Q5VTT5 1437 aa27.58■■■□□ 2
IRF3-230ENST00000601809 PLXNC1O60486 1568 aa27.57■■■□□ 2
IRF3-230ENST00000601809 ARHGEF5Q12774 1597 aa27.57■■■□□ 2
IRF3-230ENST00000601809 MIA2Q96PC5 1412 aa27.56■■■□□ 2
IRF3-230ENST00000601809 RTEL1-TNFRSF6BF6WH68 1400 aa27.54■■■□□ 2
IRF3-230ENST00000601809 CCDC141Q6ZP82 1450 aa27.54■■■□□ 2
IRF3-230ENST00000601809 MYT1LQ9UL68 1186 aa27.52■■■□□ 2
IRF3-230ENST00000601809 ADGBQ8N7X0 1667 aa27.5■■□□□ 1.99
IRF3-230ENST00000601809 MLECQ14165 292 aa27.5■■□□□ 1.99
IRF3-230ENST00000601809 APLP2Q06481 763 aa27.48■■□□□ 1.99
IRF3-230ENST00000601809 A2MP01023 1474 aa27.48■■□□□ 1.99
IRF3-230ENST00000601809 RSPH4AQ5TD94 716 aa27.47■■□□□ 1.99
IRF3-230ENST00000601809 MAST1Q9Y2H9 1570 aa27.45■■□□□ 1.99
IRF3-230ENST00000601809 PTPN23Q9H3S7 1636 aa27.42■■□□□ 1.98
IRF3-230ENST00000601809 TCOF1Q13428 1488 aaKnown RBP27.42■■□□□ 1.98
IRF3-230ENST00000601809 FGD6Q6ZV73 1430 aa27.41■■□□□ 1.98
IRF3-230ENST00000601809 DHX29Q7Z478 1369 aaKnown RBP27.37■■□□□ 1.97
IRF3-230ENST00000601809 LMTK3Q96Q04 1460 aa27.36■■□□□ 1.97
IRF3-230ENST00000601809 CROCC2H7BZ55 1655 aa27.36■■□□□ 1.97
IRF3-230ENST00000601809 C3P01024 1663 aa27.36■■□□□ 1.97
IRF3-230ENST00000601809 MROH2AA6NES4 1674 aa27.33■■□□□ 1.97
IRF3-230ENST00000601809 ABCC5O15440 1437 aa27.33■■□□□ 1.96
IRF3-230ENST00000601809 DNMT1P26358 1616 aaKnown RBP27.32■■□□□ 1.96
IRF3-230ENST00000601809 SHANK2Q9UPX8 1470 aa27.32■■□□□ 1.96
IRF3-230ENST00000601809 CNTLNQ9NXG0 1405 aa27.31■■□□□ 1.96
IRF3-230ENST00000601809 TSPY4P0CV99 314 aa27.3■■□□□ 1.96
IRF3-230ENST00000601809 TSPY10P0CW01 314 aa27.3■■□□□ 1.96
IRF3-230ENST00000601809 CEBPAP49715 358 aaPredicted RBP27.29■■□□□ 1.96
IRF3-230ENST00000601809 DAPK1P53355 1430 aa27.27■■□□□ 1.96
IRF3-230ENST00000601809 CLTCQ00610 1675 aaKnown RBP27.27■■□□□ 1.96
IRF3-230ENST00000601809 PREX1Q8TCU6 1659 aa27.25■■□□□ 1.95
IRF3-230ENST00000601809 RNF17Q9BXT8 1623 aaKnown RBP27.23■■□□□ 1.95
IRF3-230ENST00000601809 PPP6R1Q9UPN7 881 aa27.22■■□□□ 1.95
IRF3-230ENST00000601809 EIF2AK4Q9P2K8 1649 aaKnown RBP27.22■■□□□ 1.95
IRF3-230ENST00000601809 SETD1BQ9UPS6 1966 aaKnown RBP27.22■■□□□ 1.95
IRF3-230ENST00000601809 FAM135AQ9P2D6 1515 aa27.21■■□□□ 1.95
IRF3-230ENST00000601809 PLPPR3Q6T4P5 718 aa27.21■■□□□ 1.95
IRF3-230ENST00000601809 GGT6Q6P531 493 aa27.2■■□□□ 1.94
IRF3-230ENST00000601809 ZMYM3Q14202 1370 aa27.2■■□□□ 1.94
IRF3-230ENST00000601809 DUOX2Q9NRD8 1548 aa27.19■■□□□ 1.94
IRF3-230ENST00000601809 MROH1Q8NDA8 1641 aa27.18■■□□□ 1.94
IRF3-230ENST00000601809 KIF3BO15066 747 aa27.17■■□□□ 1.94
IRF3-230ENST00000601809 ESF1Q9H501 851 aaKnown RBP27.16■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms