RNA–Protein interactions for RNA: ENST00000600517.1

ARHGEF1-222, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 428 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-222ENST00000600517 ARHGAP5Q13017 1502 aa21.4■■□□□ 1.02
ARHGEF1-222ENST00000600517 RICTORQ6R327 1708 aa21.38■■□□□ 1.01
ARHGEF1-222ENST00000600517 POGZQ7Z3K3 1410 aa21.38■■□□□ 1.01
ARHGEF1-222ENST00000600517 GPATCH8Q9UKJ3 1502 aaKnown RBP21.36■■□□□ 1.01
ARHGEF1-222ENST00000600517 MAGI2Q86UL8 1455 aa21.35■■□□□ 1.01
ARHGEF1-222ENST00000600517 PREX2Q70Z35 1606 aa21.34■■□□□ 1.01
ARHGEF1-222ENST00000600517 CDC42BPBQ9Y5S2 1711 aa21.34■■□□□ 1.01
ARHGEF1-222ENST00000600517 ZMYM4Q5VZL5 1548 aa21.34■■□□□ 1.01
ARHGEF1-222ENST00000600517 AFAP1Q8N556 730 aa21.33■■□□□ 1.01
ARHGEF1-222ENST00000600517 CCNB3Q8WWL7 1395 aa21.33■■□□□ 1
ARHGEF1-222ENST00000600517 EHBP1L1Q8N3D4 1523 aa21.32■■□□□ 1
ARHGEF1-222ENST00000600517 CFDP1Q9UEE9 299 aaPredicted RBP21.31■■□□□ 1
ARHGEF1-222ENST00000600517 ZNF777Q9ULD5 760 aaPredicted RBP21.3■■□□□ 1
ARHGEF1-222ENST00000600517 ZNF518AQ6AHZ1 1483 aa21.3■■□□□ 1
ARHGEF1-222ENST00000600517 YEATS2Q9ULM3 1422 aa21.29■■□□□ 1
ARHGEF1-222ENST00000600517 CDC42BPAQ5VT25 1732 aa21.29■■□□□ 1
ARHGEF1-222ENST00000600517 TIAM1Q13009 1591 aa21.29■■□□□ 1
ARHGEF1-222ENST00000600517 ARHGEF12Q9NZN5 1544 aa21.29■■□□□ 1
ARHGEF1-222ENST00000600517 ZFYVE16Q7Z3T8 1539 aa21.28■■□□□ 1
ARHGEF1-222ENST00000600517 ARHGEF40Q8TER5 1519 aa21.28■■□□□ 1
ARHGEF1-222ENST00000600517 MAP3K1Q13233 1512 aa21.27■■□□□ 1
ARHGEF1-222ENST00000600517 ARID4BQ4LE39 1312 aaPredicted RBP21.27■□□□□ 0.99
ARHGEF1-222ENST00000600517 ABCC1P33527 1531 aa21.26■□□□□ 0.99
ARHGEF1-222ENST00000600517 TRAPPC8Q9Y2L5 1435 aa21.26■□□□□ 0.99
ARHGEF1-222ENST00000600517 LRRC9Q6ZRR7 1453 aa21.25■□□□□ 0.99
ARHGEF1-222ENST00000600517 HNRNPMP52272 730 aaKnown RBP eCLIP21.24■□□□□ 0.99
ARHGEF1-222ENST00000600517 KANK4Q5T7N3 995 aaPredicted RBP21.24■□□□□ 0.99
ARHGEF1-222ENST00000600517 KDM5CP41229 1560 aa21.23■□□□□ 0.99
ARHGEF1-222ENST00000600517 KIAA1107Q9UPP5 1409 aa21.23■□□□□ 0.99
ARHGEF1-222ENST00000600517 ATP10AO60312 1499 aa21.23■□□□□ 0.99
ARHGEF1-222ENST00000600517 NCOA2Q15596 1464 aa21.23■□□□□ 0.99
ARHGEF1-222ENST00000600517 MLH3Q9UHC1 1453 aa21.22■□□□□ 0.99
ARHGEF1-222ENST00000600517 SAMD9LQ8IVG5 1584 aa21.22■□□□□ 0.99
ARHGEF1-222ENST00000600517 PLEKHH2Q8IVE3 1493 aa21.21■□□□□ 0.99
ARHGEF1-222ENST00000600517 MYT1LQ9UL68 1186 aa21.21■□□□□ 0.99
ARHGEF1-222ENST00000600517 APLP2Q06481 763 aa21.2■□□□□ 0.98
ARHGEF1-222ENST00000600517 ZNF644Q9H582 1327 aaPredicted RBP21.2■□□□□ 0.98
ARHGEF1-222ENST00000600517 SUPT6HQ7KZ85 1726 aaKnown RBP21.18■□□□□ 0.98
ARHGEF1-222ENST00000600517 ITSN2Q9NZM3 1697 aa21.18■□□□□ 0.98
ARHGEF1-222ENST00000600517 SYCP2Q9BX26 1530 aa21.16■□□□□ 0.98
ARHGEF1-222ENST00000600517 C9orf84Q5VXU9 1444 aa21.16■□□□□ 0.98
ARHGEF1-222ENST00000600517 ADAMTSL3P82987 1691 aa21.15■□□□□ 0.98
ARHGEF1-222ENST00000600517 HECW2Q9P2P5 1572 aa21.15■□□□□ 0.98
ARHGEF1-222ENST00000600517 SPAG9O60271 1321 aaKnown RBP21.15■□□□□ 0.98
ARHGEF1-222ENST00000600517 BCORL1Q5H9F3 1711 aa21.14■□□□□ 0.97
ARHGEF1-222ENST00000600517 MBD5Q9P267 1494 aa21.13■□□□□ 0.97
ARHGEF1-222ENST00000600517 DIP2CQ9Y2E4 1556 aa21.11■□□□□ 0.97
ARHGEF1-222ENST00000600517 MLECQ14165 292 aa21.11■□□□□ 0.97
ARHGEF1-222ENST00000600517 SIGLEC1Q9BZZ2 1709 aa21.11■□□□□ 0.97
ARHGEF1-222ENST00000600517 RSPH4AQ5TD94 716 aa21.1■□□□□ 0.97
ARHGEF1-222ENST00000600517 PTPRMP28827 1452 aa21.09■□□□□ 0.97
ARHGEF1-222ENST00000600517 REREQ9P2R6 1566 aa21.09■□□□□ 0.97
ARHGEF1-222ENST00000600517 KIDINS220Q9ULH0 1771 aa21.08■□□□□ 0.97
ARHGEF1-222ENST00000600517 ABCA6Q8N139 1617 aa21.07■□□□□ 0.96
ARHGEF1-222ENST00000600517 CAMSAP2Q08AD1 1489 aa21.07■□□□□ 0.96
ARHGEF1-222ENST00000600517 MADDQ8WXG6 1647 aa21.06■□□□□ 0.96
ARHGEF1-222ENST00000600517 MYOM3Q5VTT5 1437 aa21.05■□□□□ 0.96
ARHGEF1-222ENST00000600517 MIA2Q96PC5 1412 aa21.04■□□□□ 0.96
ARHGEF1-222ENST00000600517 AGLP35573 1532 aa21.04■□□□□ 0.96
ARHGEF1-222ENST00000600517 ATP7AQ04656 1500 aa21.04■□□□□ 0.96
ARHGEF1-222ENST00000600517 RTEL1-TNFRSF6BF6WH68 1400 aa21.04■□□□□ 0.96
ARHGEF1-222ENST00000600517 INO80Q9ULG1 1556 aaPredicted RBP21.02■□□□□ 0.95
ARHGEF1-222ENST00000600517 CCDC141Q6ZP82 1450 aa21.01■□□□□ 0.95
ARHGEF1-222ENST00000600517 TSPY4P0CV99 314 aa21■□□□□ 0.95
ARHGEF1-222ENST00000600517 TSPY10P0CW01 314 aa21■□□□□ 0.95
ARHGEF1-222ENST00000600517 A2MP01023 1474 aa20.98■□□□□ 0.95
ARHGEF1-222ENST00000600517 ARHGEF5Q12774 1597 aa20.97■□□□□ 0.95
ARHGEF1-222ENST00000600517 RIMS1Q86UR5 1692 aaKnown RBP20.97■□□□□ 0.95
ARHGEF1-222ENST00000600517 DHX29Q7Z478 1369 aaKnown RBP20.94■□□□□ 0.94
ARHGEF1-222ENST00000600517 ESF1Q9H501 851 aaKnown RBP20.93■□□□□ 0.94
ARHGEF1-222ENST00000600517 PLXNC1O60486 1568 aa20.93■□□□□ 0.94
ARHGEF1-222ENST00000600517 PLPPR3Q6T4P5 718 aa20.92■□□□□ 0.94
ARHGEF1-222ENST00000600517 FER1L4A9Z1Z3 1794 aa20.92■□□□□ 0.94
ARHGEF1-222ENST00000600517 CEBPAP49715 358 aaPredicted RBP20.91■□□□□ 0.94
ARHGEF1-222ENST00000600517 FGD6Q6ZV73 1430 aa20.91■□□□□ 0.94
ARHGEF1-222ENST00000600517 ADGBQ8N7X0 1667 aa20.89■□□□□ 0.94
ARHGEF1-222ENST00000600517 GGT6Q6P531 493 aa20.88■□□□□ 0.93
ARHGEF1-222ENST00000600517 PPP6R1Q9UPN7 881 aa20.88■□□□□ 0.93
ARHGEF1-222ENST00000600517 TCOF1Q13428 1488 aaKnown RBP20.88■□□□□ 0.93
ARHGEF1-222ENST00000600517 CNTLNQ9NXG0 1405 aa20.87■□□□□ 0.93
ARHGEF1-222ENST00000600517 PTPN23Q9H3S7 1636 aa20.86■□□□□ 0.93
ARHGEF1-222ENST00000600517 MAST1Q9Y2H9 1570 aa20.86■□□□□ 0.93
ARHGEF1-222ENST00000600517 ABCC5O15440 1437 aa20.86■□□□□ 0.93
ARHGEF1-222ENST00000600517 KIF3BO15066 747 aa20.85■□□□□ 0.93
ARHGEF1-222ENST00000600517 LMTK3Q96Q04 1460 aa20.82■□□□□ 0.92
ARHGEF1-222ENST00000600517 ZMYM3Q14202 1370 aa20.82■□□□□ 0.92
ARHGEF1-222ENST00000600517 DAPK1P53355 1430 aa20.8■□□□□ 0.92
ARHGEF1-222ENST00000600517 SHANK2Q9UPX8 1470 aa20.8■□□□□ 0.92
ARHGEF1-222ENST00000600517 PPARGC1BQ86YN6 1023 aaKnown RBP20.79■□□□□ 0.92
ARHGEF1-222ENST00000600517 FAM50AQ14320 339 aaKnown RBP20.78■□□□□ 0.92
ARHGEF1-222ENST00000600517 DNMT1P26358 1616 aaKnown RBP20.77■□□□□ 0.92
ARHGEF1-222ENST00000600517 RRP7BPQ9NSQ0 103 aa20.76■□□□□ 0.91
ARHGEF1-222ENST00000600517 C3P01024 1663 aa20.76■□□□□ 0.91
ARHGEF1-222ENST00000600517 HSPA2P54652 639 aa20.75■□□□□ 0.91
ARHGEF1-222ENST00000600517 CHIC2Q9UKJ5 165 aa20.75■□□□□ 0.91
ARHGEF1-222ENST00000600517 KIF15Q9NS87 1388 aa20.74■□□□□ 0.91
ARHGEF1-222ENST00000600517 MROH2AA6NES4 1674 aa20.74■□□□□ 0.91
ARHGEF1-222ENST00000600517 WASHC2CQ9Y4E1 1318 aa20.74■□□□□ 0.91
ARHGEF1-222ENST00000600517 DUOX2Q9NRD8 1548 aa20.73■□□□□ 0.91
ARHGEF1-222ENST00000600517 NPATQ14207 1427 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms