RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 HSPA2P54652 639 aa29.7■■■□□ 2.35
CCDC9-205ENST00000600117 POGZQ7Z3K3 1410 aa29.7■■■□□ 2.34
CCDC9-205ENST00000600117 CFAP74Q9C0B2 1584 aa29.69■■■□□ 2.34
CCDC9-205ENST00000600117 CDK11AQ9UQ88 783 aaPredicted RBP29.69■■■□□ 2.34
CCDC9-205ENST00000600117 MAP3K1Q13233 1512 aa29.69■■■□□ 2.34
CCDC9-205ENST00000600117 AKNAQ7Z591 1439 aa29.69■■■□□ 2.34
CCDC9-205ENST00000600117 FANCAO15360 1455 aa29.68■■■□□ 2.34
CCDC9-205ENST00000600117 TROQ12816 1431 aaPredicted RBP29.68■■■□□ 2.34
CCDC9-205ENST00000600117 ZMYM4Q5VZL5 1548 aa29.66■■■□□ 2.34
CCDC9-205ENST00000600117 CERKQ8TCT0 537 aa29.62■■■□□ 2.33
CCDC9-205ENST00000600117 SIGLEC1Q9BZZ2 1709 aa29.61■■■□□ 2.33
CCDC9-205ENST00000600117 ZFYVE16Q7Z3T8 1539 aa29.61■■■□□ 2.33
CCDC9-205ENST00000600117 PLPPR3Q6T4P5 718 aa29.6■■■□□ 2.33
CCDC9-205ENST00000600117 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.6■■■□□ 2.33
CCDC9-205ENST00000600117 MAGI2Q86UL8 1455 aa29.59■■■□□ 2.33
CCDC9-205ENST00000600117 KIF14Q15058 1648 aa29.58■■■□□ 2.33
CCDC9-205ENST00000600117 EHBP1L1Q8N3D4 1523 aa29.58■■■□□ 2.33
CCDC9-205ENST00000600117 YEATS2Q9ULM3 1422 aa29.57■■■□□ 2.32
CCDC9-205ENST00000600117 MTUS2Q5JR59 1369 aa29.57■■■□□ 2.32
CCDC9-205ENST00000600117 FER1L4A9Z1Z3 1794 aa29.57■■■□□ 2.32
CCDC9-205ENST00000600117 LRRC9Q6ZRR7 1453 aa29.56■■■□□ 2.32
CCDC9-205ENST00000600117 TTC37Q6PGP7 1564 aa29.55■■■□□ 2.32
CCDC9-205ENST00000600117 APLP2Q06481 763 aa29.54■■■□□ 2.32
CCDC9-205ENST00000600117 KANK4Q5T7N3 995 aaPredicted RBP29.54■■■□□ 2.32
CCDC9-205ENST00000600117 MLECQ14165 292 aa29.49■■■□□ 2.31
CCDC9-205ENST00000600117 PREX1Q8TCU6 1659 aa29.45■■■□□ 2.31
CCDC9-205ENST00000600117 ARHGEF12Q9NZN5 1544 aa29.45■■■□□ 2.3
CCDC9-205ENST00000600117 SUPT6HQ7KZ85 1726 aaKnown RBP29.43■■■□□ 2.3
CCDC9-205ENST00000600117 SCAPERQ9BY12 1400 aa29.43■■■□□ 2.3
CCDC9-205ENST00000600117 PLCH2O75038 1416 aa29.41■■■□□ 2.3
CCDC9-205ENST00000600117 NCOA2Q15596 1464 aa29.41■■■□□ 2.3
CCDC9-205ENST00000600117 ATP10AO60312 1499 aa29.4■■■□□ 2.3
CCDC9-205ENST00000600117 C9orf84Q5VXU9 1444 aa29.38■■■□□ 2.29
CCDC9-205ENST00000600117 MYO5CQ9NQX4 1742 aa29.38■■■□□ 2.29
CCDC9-205ENST00000600117 DISP3Q9P2K9 1392 aa29.36■■■□□ 2.29
CCDC9-205ENST00000600117 CDC42BPAQ5VT25 1732 aa29.35■■■□□ 2.29
CCDC9-205ENST00000600117 DMRT2Q9Y5R5 561 aa29.35■■■□□ 2.29
CCDC9-205ENST00000600117 STRCQ7RTU9 1775 aa29.34■■■□□ 2.29
CCDC9-205ENST00000600117 SETD1BQ9UPS6 1966 aaKnown RBP29.34■■■□□ 2.29
CCDC9-205ENST00000600117 GPATCH8Q9UKJ3 1502 aaKnown RBP29.34■■■□□ 2.29
CCDC9-205ENST00000600117 PREX2Q70Z35 1606 aa29.34■■■□□ 2.29
CCDC9-205ENST00000600117 CCNB3Q8WWL7 1395 aa29.32■■■□□ 2.28
CCDC9-205ENST00000600117 CDC42BPBQ9Y5S2 1711 aa29.31■■■□□ 2.28
CCDC9-205ENST00000600117 CEBPAP49715 358 aaPredicted RBP29.31■■■□□ 2.28
CCDC9-205ENST00000600117 ILDR2Q71H61 639 aa29.31■■■□□ 2.28
CCDC9-205ENST00000600117 SOCS7O14512 581 aa29.3■■■□□ 2.28
CCDC9-205ENST00000600117 EFCAB2Q5VUJ9 269 aa29.29■■■□□ 2.28
CCDC9-205ENST00000600117 UHRF1BP1Q6BDS2 1440 aa29.27■■■□□ 2.28
CCDC9-205ENST00000600117 ITSN2Q9NZM3 1697 aa29.26■■■□□ 2.27
CCDC9-205ENST00000600117 PPARGC1BQ86YN6 1023 aaKnown RBP29.26■■■□□ 2.27
CCDC9-205ENST00000600117 ARHGAP5Q13017 1502 aa29.25■■■□□ 2.27
CCDC9-205ENST00000600117 ZNF518AQ6AHZ1 1483 aa29.24■■■□□ 2.27
CCDC9-205ENST00000600117 MYOM3Q5VTT5 1437 aa29.21■■■□□ 2.27
CCDC9-205ENST00000600117 KDM5CP41229 1560 aa29.21■■■□□ 2.27
CCDC9-205ENST00000600117 PTPRTO14522 1441 aa29.19■■■□□ 2.26
CCDC9-205ENST00000600117 CFDP1Q9UEE9 299 aaPredicted RBP29.18■■■□□ 2.26
CCDC9-205ENST00000600117 REREQ9P2R6 1566 aa29.17■■■□□ 2.26
CCDC9-205ENST00000600117 SPATA31D1Q6ZQQ2 1576 aa29.16■■■□□ 2.26
CCDC9-205ENST00000600117 SAMD9LQ8IVG5 1584 aa29.16■■■□□ 2.26
CCDC9-205ENST00000600117 DIP2CQ9Y2E4 1556 aa29.15■■■□□ 2.26
CCDC9-205ENST00000600117 AFAP1Q8N556 730 aa29.15■■■□□ 2.26
CCDC9-205ENST00000600117 C3P01024 1663 aa29.14■■■□□ 2.26
CCDC9-205ENST00000600117 MIA2Q96PC5 1412 aa29.13■■■□□ 2.25
CCDC9-205ENST00000600117 ABCC1P33527 1531 aa29.12■■■□□ 2.25
CCDC9-205ENST00000600117 ZNF777Q9ULD5 760 aaPredicted RBP29.1■■■□□ 2.25
CCDC9-205ENST00000600117 FGD6Q6ZV73 1430 aa29.1■■■□□ 2.25
CCDC9-205ENST00000600117 MYT1LQ9UL68 1186 aa29.09■■■□□ 2.25
CCDC9-205ENST00000600117 ZNF644Q9H582 1327 aaPredicted RBP29.09■■■□□ 2.25
CCDC9-205ENST00000600117 ABCA6Q8N139 1617 aa29.09■■■□□ 2.25
CCDC9-205ENST00000600117 MLH3Q9UHC1 1453 aa29.08■■■□□ 2.25
CCDC9-205ENST00000600117 LTBP4Q8N2S1 1624 aa29.08■■■□□ 2.25
CCDC9-205ENST00000600117 CAMSAP2Q08AD1 1489 aa29.07■■■□□ 2.24
CCDC9-205ENST00000600117 IQSEC2Q5JU85 1478 aa29.07■■■□□ 2.24
CCDC9-205ENST00000600117 AGLP35573 1532 aa29.06■■■□□ 2.24
CCDC9-205ENST00000600117 PLEKHH2Q8IVE3 1493 aa29.05■■■□□ 2.24
CCDC9-205ENST00000600117 TRAPPC8Q9Y2L5 1435 aa29.05■■■□□ 2.24
CCDC9-205ENST00000600117 KIAA1107Q9UPP5 1409 aa29.04■■■□□ 2.24
CCDC9-205ENST00000600117 ESF1Q9H501 851 aaKnown RBP29.04■■■□□ 2.24
CCDC9-205ENST00000600117 PTPN23Q9H3S7 1636 aa29.04■■■□□ 2.24
CCDC9-205ENST00000600117 SYCP2Q9BX26 1530 aa29.04■■■□□ 2.24
CCDC9-205ENST00000600117 TCOF1Q13428 1488 aaKnown RBP29.03■■■□□ 2.24
CCDC9-205ENST00000600117 NCOA1Q15788 1441 aa29.01■■■□□ 2.23
CCDC9-205ENST00000600117 MBD5Q9P267 1494 aa29■■■□□ 2.23
CCDC9-205ENST00000600117 CNTLNQ9NXG0 1405 aa28.98■■■□□ 2.23
CCDC9-205ENST00000600117 HNRNPMP52272 730 aaKnown RBP eCLIP28.98■■■□□ 2.23
CCDC9-205ENST00000600117 ARHGEF5Q12774 1597 aa28.94■■■□□ 2.22
CCDC9-205ENST00000600117 RRBP1Q9P2E9 1410 aaKnown RBP28.94■■■□□ 2.22
CCDC9-205ENST00000600117 KIDINS220Q9ULH0 1771 aa28.93■■■□□ 2.22
CCDC9-205ENST00000600117 CAMSAP1Q5T5Y3 1602 aa28.9■■■□□ 2.22
CCDC9-205ENST00000600117 MROH2AA6NES4 1674 aa28.89■■■□□ 2.22
CCDC9-205ENST00000600117 NPATQ14207 1427 aa28.89■■■□□ 2.22
CCDC9-205ENST00000600117 CCDC141Q6ZP82 1450 aa28.89■■■□□ 2.22
CCDC9-205ENST00000600117 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.87■■■□□ 2.21
CCDC9-205ENST00000600117 FAM50AQ14320 339 aaKnown RBP28.86■■■□□ 2.21
CCDC9-205ENST00000600117 DNMT1P26358 1616 aaKnown RBP28.86■■■□□ 2.21
CCDC9-205ENST00000600117 RSPH4AQ5TD94 716 aa28.85■■■□□ 2.21
CCDC9-205ENST00000600117 ABCC5O15440 1437 aa28.84■■■□□ 2.21
CCDC9-205ENST00000600117 DAPK1P53355 1430 aa28.82■■■□□ 2.2
CCDC9-205ENST00000600117 INO80Q9ULG1 1556 aaPredicted RBP28.81■■■□□ 2.2
CCDC9-205ENST00000600117 CROCC2H7BZ55 1655 aa28.8■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms