RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 PCF11O94913 1555 aaKnown RBP24.32■■□□□ 1.48
IRF3-223ENST00000599223 ARID4BQ4LE39 1312 aaPredicted RBP24.32■■□□□ 1.48
IRF3-223ENST00000599223 SCAPERQ9BY12 1400 aa24.29■■□□□ 1.48
IRF3-223ENST00000599223 ATP1B4Q9UN42 357 aaPredicted RBP24.29■■□□□ 1.48
IRF3-223ENST00000599223 TROQ12816 1431 aaPredicted RBP24.28■■□□□ 1.48
IRF3-223ENST00000599223 MAGI2Q86UL8 1455 aa24.27■■□□□ 1.48
IRF3-223ENST00000599223 LMTK3Q96Q04 1460 aa24.27■■□□□ 1.48
IRF3-223ENST00000599223 FER1L4A9Z1Z3 1794 aa24.25■■□□□ 1.47
IRF3-223ENST00000599223 CDC42BPBQ9Y5S2 1711 aa24.24■■□□□ 1.47
IRF3-223ENST00000599223 ARHGAP5Q13017 1502 aa24.23■■□□□ 1.47
IRF3-223ENST00000599223 KDM5CP41229 1560 aa24.21■■□□□ 1.47
IRF3-223ENST00000599223 PREX2Q70Z35 1606 aa24.21■■□□□ 1.47
IRF3-223ENST00000599223 CLIP1P30622 1438 aa24.19■■□□□ 1.46
IRF3-223ENST00000599223 CASKIN1Q8WXD9 1431 aa24.18■■□□□ 1.46
IRF3-223ENST00000599223 CDK11AQ9UQ88 783 aaPredicted RBP24.17■■□□□ 1.46
IRF3-223ENST00000599223 C9orf84Q5VXU9 1444 aa24.17■■□□□ 1.46
IRF3-223ENST00000599223 ARHGEF12Q9NZN5 1544 aa24.16■■□□□ 1.46
IRF3-223ENST00000599223 CCDC18Q5T9S5 1454 aa24.16■■□□□ 1.46
IRF3-223ENST00000599223 ZNF518AQ6AHZ1 1483 aa24.16■■□□□ 1.46
IRF3-223ENST00000599223 EFCAB2Q5VUJ9 269 aa24.16■■□□□ 1.46
IRF3-223ENST00000599223 ATP10AO60312 1499 aa24.15■■□□□ 1.46
IRF3-223ENST00000599223 DIP2CQ9Y2E4 1556 aa24.15■■□□□ 1.46
IRF3-223ENST00000599223 CDC42BPAQ5VT25 1732 aa24.14■■□□□ 1.45
IRF3-223ENST00000599223 ABCC1P33527 1531 aa24.14■■□□□ 1.45
IRF3-223ENST00000599223 ABCA6Q8N139 1617 aa24.13■■□□□ 1.45
IRF3-223ENST00000599223 ITSN2Q9NZM3 1697 aa24.13■■□□□ 1.45
IRF3-223ENST00000599223 FYCO1Q9BQS8 1478 aa24.12■■□□□ 1.45
IRF3-223ENST00000599223 MLECQ14165 292 aa24.11■■□□□ 1.45
IRF3-223ENST00000599223 PLPPR3Q6T4P5 718 aa24.09■■□□□ 1.45
IRF3-223ENST00000599223 AFAP1Q8N556 730 aa24.08■■□□□ 1.45
IRF3-223ENST00000599223 REREQ9P2R6 1566 aa24.07■■□□□ 1.44
IRF3-223ENST00000599223 TRAPPC8Q9Y2L5 1435 aa24.06■■□□□ 1.44
IRF3-223ENST00000599223 HSPA2P54652 639 aa24.05■■□□□ 1.44
IRF3-223ENST00000599223 PREX1Q8TCU6 1659 aa24.03■■□□□ 1.44
IRF3-223ENST00000599223 MLH3Q9UHC1 1453 aa24.03■■□□□ 1.44
IRF3-223ENST00000599223 KIDINS220Q9ULH0 1771 aa24.03■■□□□ 1.44
IRF3-223ENST00000599223 SAMD9LQ8IVG5 1584 aa24.02■■□□□ 1.44
IRF3-223ENST00000599223 SYCP2Q9BX26 1530 aa23.97■■□□□ 1.43
IRF3-223ENST00000599223 C3P01024 1663 aa23.95■■□□□ 1.43
IRF3-223ENST00000599223 AGLP35573 1532 aa23.95■■□□□ 1.43
IRF3-223ENST00000599223 GPATCH8Q9UKJ3 1502 aaKnown RBP23.95■■□□□ 1.43
IRF3-223ENST00000599223 CEBPAP49715 358 aaPredicted RBP23.94■■□□□ 1.42
IRF3-223ENST00000599223 FBXO41Q8TF61 875 aa23.92■■□□□ 1.42
IRF3-223ENST00000599223 MYT1LQ9UL68 1186 aa23.91■■□□□ 1.42
IRF3-223ENST00000599223 STRCQ7RTU9 1775 aa23.89■■□□□ 1.42
IRF3-223ENST00000599223 INO80Q9ULG1 1556 aaPredicted RBP23.89■■□□□ 1.41
IRF3-223ENST00000599223 TIAM1Q13009 1591 aa23.86■■□□□ 1.41
IRF3-223ENST00000599223 ATP7AQ04656 1500 aa23.85■■□□□ 1.41
IRF3-223ENST00000599223 SUPT6HQ7KZ85 1726 aaKnown RBP23.84■■□□□ 1.41
IRF3-223ENST00000599223 PLXNC1O60486 1568 aa23.84■■□□□ 1.41
IRF3-223ENST00000599223 ZNF777Q9ULD5 760 aaPredicted RBP23.84■■□□□ 1.41
IRF3-223ENST00000599223 SETD1BQ9UPS6 1966 aaKnown RBP23.83■■□□□ 1.41
IRF3-223ENST00000599223 UHRF1BP1Q6BDS2 1440 aa23.83■■□□□ 1.4
IRF3-223ENST00000599223 EHBP1L1Q8N3D4 1523 aa23.82■■□□□ 1.4
IRF3-223ENST00000599223 MROH2AA6NES4 1674 aa23.8■■□□□ 1.4
IRF3-223ENST00000599223 CEP162Q5TB80 1403 aa23.8■■□□□ 1.4
IRF3-223ENST00000599223 KIAA1107Q9UPP5 1409 aa23.8■■□□□ 1.4
IRF3-223ENST00000599223 MTUS2Q5JR59 1369 aa23.79■■□□□ 1.4
IRF3-223ENST00000599223 CCNB3Q8WWL7 1395 aa23.79■■□□□ 1.4
IRF3-223ENST00000599223 HNRNPMP52272 730 aaKnown RBP eCLIP23.79■■□□□ 1.4
IRF3-223ENST00000599223 PLEKHH2Q8IVE3 1493 aa23.78■■□□□ 1.4
IRF3-223ENST00000599223 SPAG9O60271 1321 aaKnown RBP23.77■■□□□ 1.4
IRF3-223ENST00000599223 CLTCQ00610 1675 aaKnown RBP23.76■■□□□ 1.39
IRF3-223ENST00000599223 CNTLNQ9NXG0 1405 aa23.76■■□□□ 1.39
IRF3-223ENST00000599223 CFDP1Q9UEE9 299 aaPredicted RBP23.75■■□□□ 1.39
IRF3-223ENST00000599223 ADGBQ8N7X0 1667 aa23.73■■□□□ 1.39
IRF3-223ENST00000599223 A2MP01023 1474 aa23.73■■□□□ 1.39
IRF3-223ENST00000599223 ZNF644Q9H582 1327 aaPredicted RBP23.72■■□□□ 1.39
IRF3-223ENST00000599223 MBD5Q9P267 1494 aa23.71■■□□□ 1.39
IRF3-223ENST00000599223 CERKQ8TCT0 537 aa23.7■■□□□ 1.38
IRF3-223ENST00000599223 ESF1Q9H501 851 aaKnown RBP23.68■■□□□ 1.38
IRF3-223ENST00000599223 MYO3AQ8NEV4 1616 aa23.68■■□□□ 1.38
IRF3-223ENST00000599223 NPATQ14207 1427 aa23.67■■□□□ 1.38
IRF3-223ENST00000599223 ZNF142P52746 1687 aaPredicted RBP23.66■■□□□ 1.38
IRF3-223ENST00000599223 NCOA1Q15788 1441 aa23.66■■□□□ 1.38
IRF3-223ENST00000599223 NCOA2Q15596 1464 aa23.65■■□□□ 1.38
IRF3-223ENST00000599223 ZMYM3Q14202 1370 aa23.64■■□□□ 1.37
IRF3-223ENST00000599223 CAMSAP2Q08AD1 1489 aa23.63■■□□□ 1.37
IRF3-223ENST00000599223 CAMSAP1Q5T5Y3 1602 aa23.62■■□□□ 1.37
IRF3-223ENST00000599223 PTPRTO14522 1441 aa23.62■■□□□ 1.37
IRF3-223ENST00000599223 PTPRKQ15262 1439 aa23.59■■□□□ 1.37
IRF3-223ENST00000599223 LTBP4Q8N2S1 1624 aa23.59■■□□□ 1.37
IRF3-223ENST00000599223 CCDC141Q6ZP82 1450 aa23.59■■□□□ 1.37
IRF3-223ENST00000599223 CEP170BQ9Y4F5 1589 aaPredicted RBP23.59■■□□□ 1.37
IRF3-223ENST00000599223 RTEL1-TNFRSF6BF6WH68 1400 aa23.58■■□□□ 1.36
IRF3-223ENST00000599223 DMRT2Q9Y5R5 561 aa23.57■■□□□ 1.36
IRF3-223ENST00000599223 GGT6Q6P531 493 aa23.55■■□□□ 1.36
IRF3-223ENST00000599223 VPS8Q8N3P4 1428 aa23.54■■□□□ 1.36
IRF3-223ENST00000599223 ARHGEF5Q12774 1597 aa23.53■■□□□ 1.36
IRF3-223ENST00000599223 LRRC9Q6ZRR7 1453 aa23.51■■□□□ 1.35
IRF3-223ENST00000599223 DHX29Q7Z478 1369 aaKnown RBP23.51■■□□□ 1.35
IRF3-223ENST00000599223 PLA2R1Q13018 1463 aa23.49■■□□□ 1.35
IRF3-223ENST00000599223 KDM5DQ9BY66 1539 aa23.49■■□□□ 1.35
IRF3-223ENST00000599223 LOC105371045A0A1W2PR82 267 aa23.48■■□□□ 1.35
IRF3-223ENST00000599223 TCOF1Q13428 1488 aaKnown RBP23.48■■□□□ 1.35
IRF3-223ENST00000599223 DNMT1P26358 1616 aaKnown RBP23.47■■□□□ 1.35
IRF3-223ENST00000599223 FAM135AQ9P2D6 1515 aa23.45■■□□□ 1.34
IRF3-223ENST00000599223 NCKAP5LQ9HCH0 1330 aa23.45■■□□□ 1.34
IRF3-223ENST00000599223 A2ML1A8K2U0 1454 aa23.44■■□□□ 1.34
IRF3-223ENST00000599223 MAST1Q9Y2H9 1570 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms